You are here

Home

ATCC64974_66800-T1, ATCC64974_66800-T1 (mRNA) Aspergillus niger N402

Overview
NameATCC64974_66800-T1
Unique NameATCC64974_66800-T1
TypemRNA
OrganismAspergillus niger N402
Sequences
The following sequences are available for this feature:

mRNA from alignment at OGUI01000010.1:1232859..1234440+

Legend: exonpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>ATCC64974_66800-T1 ID=ATCC64974_66800-T1|Name=ATCC64974_66800-T1|organism=Aspergillus niger N402|type=mRNA|length=1582bp|location=Sequence derived from alignment at OGUI01000010.1:1232859..1234440+ (Aspergillus niger N402)
ATGCCACGTCGGAACCAGGTTGTAAATATCCTGCTTGGACTGGCTTGTGC
CAGTTCCACGGCTTGGGCCAACAAGAAGGCCTTCAACATCCATGATGACC
TATTAGCTTACCCTCAAGTATGCATCGCATCTTGTGCACCCCTCACAGCT
CAATCTAACTGGTTTTCACTCTTAGTTTGAGGTTCTTTTCCCCGATGACT
ACGTCCTCGAGTCCCACGCCAGAGAGCTCTTACGGGAACGCAGGGATAGC
TCTTCTACTTTCGCCGATACTCAAGAGAAATCCGCTCAGGTGTATCTAGG
CCGCAGTACCCATGACAACGACCAGGCGAAACCCCGGGATGGCGATGACG
GGTTCAGCTATGAGGAAATGCTTTTAGGAGAACAGCGATTTCTCTGCCAG
ATCCCTCACGTCGATGTTGACGATCGGACCAATTCCACGGGACATCCTCA
CGAGGCGGACGAACAGAAGGAGCTGGCGCGCGCGATGGATCGGGGCCTGG
AGCTCCTGCGCGAGATGGAGGGCAAATGCATGTATTATATATCCGGATGG
TGGTCCTATTCCTTCTGCTACAAGAACCAGATTAAGCAGTTCCACGCCCT
CCCCTCCGGGAGTGGGATTCCCAACTACCCGCCCATGGAGGACCATACGA
CACACTCTTTCATTCTGGGCAAATTTCCTCAAGGAGATGGCGACGAAGAT
GAGGTAGAAGGGGCCGCCGACCAGAAGAAACCTGTTACAGATGTGGCGGA
GCTCCAGACGAAGGGCGGCTCCCGGTACCTGGTGCAACGATTGGATGGCG
GCACGAAATGCGACCTGACAGGTCGGGACCGGAAAATCGAGGTCCAGTTT
CATTGCCACCCTCAGTCGACAGACCGCATTGGTTGGATCAAGGAGCTGAC
CACATGCTCCTACCTCATGGTCATCTACACCCCGCGTCTATGTAACGACG
TTGCCTTCCTGCCACCCCAGCAGGACGAGGTCCATGGAATTGAGTGCCGC
GAGATTATTTCCCCAGAGCAAGTATCGGACTGGGAAGCGCTCCGGGAGTA
CCAGCTGGCGCAGCGACTAGTGGAGTCAGCCGTAATGGAGGAGCTCCCGG
TCGTCGGAGACATCCAGGTCGGTGCTCAGAAGCTGGTGGGATCGGAAGGC
AAGGAGATTGAGAAAGGACGCGTCGCGTGGGCCGGAGAAGAGATCATCGA
GGTCGTGGCCAAGCGCGAGAACGGGGAAGTGCAACAATTGTCGCGCGAGG
ACCTGAAAAAGCACGATCTGGACCCAGAGAAGCTCGAAACGTTGAAGAAG
CGTTTGGAGGAGTGGGCTAAGGGTAAGGACTGGACGCTGGAGGTTATCTC
GGTCAACGGAGAACGTCAACTGCGCGGCCTCGTCGACGATGATGAAGAGG
AGGAAGACAACGGAGAGGGCTCCCAGGAAGAGATGGTCACGGATGCCGCC
CCTTCCAAGGAGACGACTGAAGCTGAGGCGGCAGGGCAGGAGCCACAACC
ACAGCACCCGGAAGAACAGCAGCCATTGGAGACCGACGAAGCTGAGGAGG
TAAGCAAGAAGAGGGTCAAGGATGAGTTGTAG
back to top

Coding sequence (CDS) from alignment at OGUI01000010.1:1232859..1234440+

>ATCC64974_66800-T1 ID=ATCC64974_66800-T1|Name=ATCC64974_66800-T1|organism=Aspergillus niger N402|type=CDS|length=3048bp|location=Sequence derived from alignment at OGUI01000010.1:1232859..1234440+ (Aspergillus niger N402)
ATGCCACGTCGGAACCAGGTTGTAAATATCCTGCTTGGACTGGCTTGTGC
CAGTTCCACGGCTTGGGCCAACAAGAAGGCCTTCAACATCCATGATGACC
TATTAGCTTACCCTCAATTTGAGGTTCTTTTCCCCGATGACTACGTCCTC
GAGTCCCACGCCAGAGAGCTCTTACGGGAACGCAGGGATAGCTCTTCTAC
TTTCGCCGATACTCAAGAGAAATCCGCTCAGGTGTATCTAGGCCGCAGTA
CCCATGACAACGACCAGGCGAAACCCCGGGATGGCGATGACGGGTTCAGC
TATGAGGAAATGCTTTTAGGAGAACAGCGATTTCTCTGCCAGATCCCTCA
CGTCGATGTTGACGATCGGACCAATTCCACGGGACATCCTCACGAGGCGG
ACGAACAGAAGGAGCTGGCGCGCGCGATGGATCGGGGCCTGGAGCTCCTG
CGCGAGATGGAGGGCAAATGCATGTATTATATATCCGGATGGTGGTCCTA
TTCCTTCTGCTACAAGAACCAGATTAAGCAGTTCCACGCCCTCCCCTCCG
GGAGTGGGATTCCCAACTACCCGCCCATGGAGGACCATACGACACACTCT
TTCATTCTGGGCAAATTTCCTCAAGGAGATGGCGACGAAGATGAGGTAGA
AGGGGCCGCCGACCAGAAGAAACCTGTTACAGATGTGGCGGAGCTCCAGA
CGAAGGGCGGCTCCCGGTACCTGGTGCAACGATTGGATGGCGGCACGAAA
TGCGACCTGACAGGTCGGGACCGGAAAATCGAGGTCCAGTTTCATTGCCA
CCCTCAGTCGACAGACCGCATTGGTTGGATCAAGGAGCTGACCACATGCT
CCTACCTCATGGTCATCTACACCCCGCGTCTATGTAACGACGTTGCCTTC
CTGCCACCCCAGCAGGACGAGGTCCATGGAATTGAGTGCCGCGAGATTAT
TTCCCCAGAGCAAGTATCGGACTGGGAAGCGCTCCGGGAGTACCAGCTGG
CGCAGCGACTAGTGGAGTCAGCCGTAATGGAGGAGCTCCCGGTCGTCGGA
GACATCCAGGTCGGTGCTCAGAAGCTGGTGGGATCGGAAGGCAAGGAGAT
TGAGAAAGGACGCGTCGCGTGGGCCGGAGAAGAGATCATCGAGGTCGTGG
CCAAGCGCGAGAACGGGGAAGTGCAACAATTGTCGCGCGAGGACCTGAAA
AAGCACGATCTGGACCCAGAGAAGCTCGAAACGTTGAAGAAGCGTTTGGA
GGAGTGGGCTAAGGGTAAGGACTGGACGCTGGAGGTTATCTCGGTCAACG
GAGAACGTCAACTGCGCGGCCTCGTCGACGATGATGAAGAGGAGGAAGAC
AACGGAGAGGGCTCCCAGGAAGAGATGGTCACGGATGCCGCCCCTTCCAA
GGAGACGACTGAAGCTGAGGCGGCAGGGCAGGAGCCACAACCACAGCACC
CGGAAGAACAGCAGCCATTGGAGACCGACGAAGCTGAGGAGGTAAGCAAG
AAGAGGGTCAAGGATGAGTTGTAGATGCCACGTCGGAACCAGGTTGTAAA
TATCCTGCTTGGACTGGCTTGTGCCAGTTCCACGGCTTGGGCCAACAAGA
AGGCCTTCAACATCCATGATGACCTATTAGCTTACCCTCAATTTGAGGTT
CTTTTCCCCGATGACTACGTCCTCGAGTCCCACGCCAGAGAGCTCTTACG
GGAACGCAGGGATAGCTCTTCTACTTTCGCCGATACTCAAGAGAAATCCG
CTCAGGTGTATCTAGGCCGCAGTACCCATGACAACGACCAGGCGAAACCC
CGGGATGGCGATGACGGGTTCAGCTATGAGGAAATGCTTTTAGGAGAACA
GCGATTTCTCTGCCAGATCCCTCACGTCGATGTTGACGATCGGACCAATT
CCACGGGACATCCTCACGAGGCGGACGAACAGAAGGAGCTGGCGCGCGCG
ATGGATCGGGGCCTGGAGCTCCTGCGCGAGATGGAGGGCAAATGCATGTA
TTATATATCCGGATGGTGGTCCTATTCCTTCTGCTACAAGAACCAGATTA
AGCAGTTCCACGCCCTCCCCTCCGGGAGTGGGATTCCCAACTACCCGCCC
ATGGAGGACCATACGACACACTCTTTCATTCTGGGCAAATTTCCTCAAGG
AGATGGCGACGAAGATGAGGTAGAAGGGGCCGCCGACCAGAAGAAACCTG
TTACAGATGTGGCGGAGCTCCAGACGAAGGGCGGCTCCCGGTACCTGGTG
CAACGATTGGATGGCGGCACGAAATGCGACCTGACAGGTCGGGACCGGAA
AATCGAGGTCCAGTTTCATTGCCACCCTCAGTCGACAGACCGCATTGGTT
GGATCAAGGAGCTGACCACATGCTCCTACCTCATGGTCATCTACACCCCG
CGTCTATGTAACGACGTTGCCTTCCTGCCACCCCAGCAGGACGAGGTCCA
TGGAATTGAGTGCCGCGAGATTATTTCCCCAGAGCAAGTATCGGACTGGG
AAGCGCTCCGGGAGTACCAGCTGGCGCAGCGACTAGTGGAGTCAGCCGTA
ATGGAGGAGCTCCCGGTCGTCGGAGACATCCAGGTCGGTGCTCAGAAGCT
GGTGGGATCGGAAGGCAAGGAGATTGAGAAAGGACGCGTCGCGTGGGCCG
GAGAAGAGATCATCGAGGTCGTGGCCAAGCGCGAGAACGGGGAAGTGCAA
CAATTGTCGCGCGAGGACCTGAAAAAGCACGATCTGGACCCAGAGAAGCT
CGAAACGTTGAAGAAGCGTTTGGAGGAGTGGGCTAAGGGTAAGGACTGGA
CGCTGGAGGTTATCTCGGTCAACGGAGAACGTCAACTGCGCGGCCTCGTC
GACGATGATGAAGAGGAGGAAGACAACGGAGAGGGCTCCCAGGAAGAGAT
GGTCACGGATGCCGCCCCTTCCAAGGAGACGACTGAAGCTGAGGCGGCAG
GGCAGGAGCCACAACCACAGCACCCGGAAGAACAGCAGCCATTGGAGACC
GACGAAGCTGAGGAGGTAAGCAAGAAGAGGGTCAAGGATGAGTTGTAG
back to top
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
YOS9ATCC64974_66800Aspergillus niger N402gene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ATCC64974_66800-T1.exon1ATCC64974_66800-T1.exon1Aspergillus niger N402exon
ATCC64974_66800-T1.exon2ATCC64974_66800-T1.exon2Aspergillus niger N402exon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ATCC64974_66800-T1.cdsATCC64974_66800-T1.cdsAspergillus niger N402CDS


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
ATCC64974_66800-T1ATCC64974_66800-T1-proteinAspergillus niger N402polypeptide


Properties
Property NameValue
NoteSECRETED:SignalP(1-23)
NoteBUSCO:EOG09264C3V
DBxrefInterPro:IPR012913
DBxrefInterPro:IPR009011
DBxrefPFAM:PF07915
ProductProtein OS-9
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger N402 whole genome analysis2021-11-01
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
OGUI01000010.1supercontigOGUI01000010.1:1232859..1234440 +
Powered by Drupal