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ATCC64974_66910-T1, ATCC64974_66910-T1 (mRNA) Aspergillus niger N402

Overview
NameATCC64974_66910-T1
Unique NameATCC64974_66910-T1
TypemRNA
OrganismAspergillus niger N402
Sequences
The following sequences are available for this feature:

mRNA from alignment at OGUI01000010.1:1286636..1287853-

Legend: CDSpolypeptideexon
Hold the cursor over a type above to highlight its positions in the sequence below.
>ATCC64974_66910-T1 ID=ATCC64974_66910-T1|Name=ATCC64974_66910-T1|organism=Aspergillus niger N402|type=mRNA|length=1218bp|location=Sequence derived from alignment at OGUI01000010.1:1286636..1287853- (Aspergillus niger N402)
ATGGCGTCAACGTCTCAACCCCCTCTCCGGTTCACTTCCCACAAGAACTT
TGTGTACCGTCTCGTCTTCGCTACGTTGACCGGCCGCACGATTCAGATCT
CCCAGATTCGTCCTTCGTCGCCTACGAATCCCGGTCTCGCTCCTCATGAA
ATCTCGTTCCTTCGTCTTCTGGAGTCCATTACCAATGGCTCCCAGATGGA
GATCTCGTACACCGGTACTATCCTTGTTTATAAGCCCGGCCTCATTACAG
GCAGTTCGCCAGGTGTGGCCACGAGCAGCGGAGGCGTCATCCGGCACGAG
CTCCCAGCAGGGTGCAATCGTGGCGTGAGTTATTATCTGCTGCCGCTCTG
CCTTTTGGCACCCTTTTCCAAGGCTCCCATCAAGGTCCTCTTTACTGGTC
CAGGTGTGATTACCTCGTCCACCCCGACTGGTGACATGTCCGTGGACAGT
GTGCGAACCGCCATTCTCCCTCTCTACAACCAATTTGGAATCTTTAACAA
CATCGAGCTGCGTATCCTACGGCGATCGAACCCTGGACCCAATGGCAGAG
GCGGTGGTGGAGAAGTCCAGCTAGTATTTGGCCACCAGCTCCGGCTGCCG
AAGACCCTGCACCTCATGAACGCCGGTCGCATCAAGAAGGTCCGCGGTGT
GGCCTACTCTGTCGGTGTTTCCGCATCCAATAACGCACGAATGATCGAAA
CCGCCCGTGGTGTTTTGAACCCACTCGTCCCTGACACCTATGTCTTCTCT
GATGTGTCGTCGGCGCCGCTCGTACCTGCTCCCGAGAAGAGCAACCCTTC
CGCGAAAAAGAAGATTGGCCTTGGATTTGGACTCTCGTTGGTTGCAGAGT
CATCTACTGGCTGCCTGTTCTCCGCCGATGTGGCGTCGCCTCCCGCAGGC
GGCGAGGCGCCTGAAGACATTGGGAAGCGATGTGCTTACCAGCTACTTGA
GGCCGTTTCGAAGGGAGGTTGCGTTGCCCCTGCAGCTGTTCCGACCATGC
TGGGTCTGATGACGATGGGATCGGAGGATGTTGGACGAATCCAGGTTGGT
CGGGAGGTGATCGCCGAGGAGAGCACCATCCAGCTGGCCAGGGACCTGAC
CAAGTTCGGTGCTCCGGGTTGGGGTCTGAGAGACGCGAGTGGTGAGAATG
AGAATGGGGATGTGATCATCAGCGTGGTTGGCCGCGGCATTGGCAACGTT
GGCCGTAAGGTTGCTTGA
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Coding sequence (CDS) from alignment at OGUI01000010.1:1286636..1287853-

>ATCC64974_66910-T1 ID=ATCC64974_66910-T1|Name=ATCC64974_66910-T1|organism=Aspergillus niger N402|type=CDS|length=1218bp|location=Sequence derived from alignment at OGUI01000010.1:1286636..1287853- (Aspergillus niger N402)
ATGGCGTCAACGTCTCAACCCCCTCTCCGGTTCACTTCCCACAAGAACTT
TGTGTACCGTCTCGTCTTCGCTACGTTGACCGGCCGCACGATTCAGATCT
CCCAGATTCGTCCTTCGTCGCCTACGAATCCCGGTCTCGCTCCTCATGAA
ATCTCGTTCCTTCGTCTTCTGGAGTCCATTACCAATGGCTCCCAGATGGA
GATCTCGTACACCGGTACTATCCTTGTTTATAAGCCCGGCCTCATTACAG
GCAGTTCGCCAGGTGTGGCCACGAGCAGCGGAGGCGTCATCCGGCACGAG
CTCCCAGCAGGGTGCAATCGTGGCGTGAGTTATTATCTGCTGCCGCTCTG
CCTTTTGGCACCCTTTTCCAAGGCTCCCATCAAGGTCCTCTTTACTGGTC
CAGGTGTGATTACCTCGTCCACCCCGACTGGTGACATGTCCGTGGACAGT
GTGCGAACCGCCATTCTCCCTCTCTACAACCAATTTGGAATCTTTAACAA
CATCGAGCTGCGTATCCTACGGCGATCGAACCCTGGACCCAATGGCAGAG
GCGGTGGTGGAGAAGTCCAGCTAGTATTTGGCCACCAGCTCCGGCTGCCG
AAGACCCTGCACCTCATGAACGCCGGTCGCATCAAGAAGGTCCGCGGTGT
GGCCTACTCTGTCGGTGTTTCCGCATCCAATAACGCACGAATGATCGAAA
CCGCCCGTGGTGTTTTGAACCCACTCGTCCCTGACACCTATGTCTTCTCT
GATGTGTCGTCGGCGCCGCTCGTACCTGCTCCCGAGAAGAGCAACCCTTC
CGCGAAAAAGAAGATTGGCCTTGGATTTGGACTCTCGTTGGTTGCAGAGT
CATCTACTGGCTGCCTGTTCTCCGCCGATGTGGCGTCGCCTCCCGCAGGC
GGCGAGGCGCCTGAAGACATTGGGAAGCGATGTGCTTACCAGCTACTTGA
GGCCGTTTCGAAGGGAGGTTGCGTTGCCCCTGCAGCTGTTCCGACCATGC
TGGGTCTGATGACGATGGGATCGGAGGATGTTGGACGAATCCAGGTTGGT
CGGGAGGTGATCGCCGAGGAGAGCACCATCCAGCTGGCCAGGGACCTGAC
CAAGTTCGGTGCTCCGGGTTGGGGTCTGAGAGACGCGAGTGGTGAGAATG
AGAATGGGGATGTGATCATCAGCGTGGTTGGCCGCGGCATTGGCAACGTT
GGCCGTAAGGTTGCTTGA
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Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Cellular Component
TermDefinition
GO:0005730nucleolus
Vocabulary: Molecular Function
TermDefinition
GO:0003824catalytic activity
Vocabulary: Biological Process
TermDefinition
GO:0042254ribosome biogenesis
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
ATCC64974_66910ATCC64974_66910Aspergillus niger N402gene


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ATCC64974_66910-T1.cdsATCC64974_66910-T1.cdsAspergillus niger N402CDS


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ATCC64974_66910-T1.exon1ATCC64974_66910-T1.exon1Aspergillus niger N402exon


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
ATCC64974_66910-T1ATCC64974_66910-T1-proteinAspergillus niger N402polypeptide


Properties
Property NameValue
NoteBUSCO:EOG0926307V
DBxrefInterPro:IPR013792
DBxrefInterPro:IPR013791
DBxrefInterPro:IPR036553
DBxrefInterPro:IPR016443
DBxrefInterPro:IPR023797
DBxrefInterPro:IPR037136
DBxrefPFAM:PF05189
DBxrefPFAM:PF01137
Producthypothetical protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger N402 whole genome analysis2021-11-01
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
OGUI01000010.1supercontigOGUI01000010.1:1286636..1287853 -
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