|
Sequences
The following sequences are available for this feature:
mRNA from alignment at OGUI01000010.1:1321505..1322845+ Legend: exonpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >ATCC64974_67030-T1 ID=ATCC64974_67030-T1|Name=ATCC64974_67030-T1|organism=Aspergillus niger N402|type=mRNA|length=1341bp|location=Sequence derived from alignment at OGUI01000010.1:1321505..1322845+ (Aspergillus niger N402) ATGAAGCACTACAAAGGAAACGAGTCCGGCGAAATCCCGGGCAAGATCCC
CAACACTTGGTGGGAAGGTGGCGCCATGTTCATGACACTCATGCAATACT
ATCACTACACGGGGGATTCCACCTACAACAAGGAAGTCATCCAGGGCATG
CAGTGGCAGGCGGGCGATTGTGACTACATGCCGGCGAACTGGAGTAGCTA
CATTGTGAGTTCCTCGCTTATGGCAGCCCCTTTCCCCTACTAATTGAGGA
TCTCAGGGAAATGACGATCAAATGTTCTGGGGCTTGGCCGCTATGACTGG
TGCTGAACTGAACTTTCCCGACTCTAGCGATGGGTACTCCTGGCTTTCTC
TAGCACAGGGTGTTTTCAACACCCAGGTCGCCCGCTGGGATAATTCTACC
TGCAACGGGGGTATGCGGTGGCAGATTTATACCTACGAATCCGGTTATAC
CATGAAGAACGCCATTTCCAACGGTGGTCTGTTTCAATTATCGGCTCGTC
TGGCGCGCTATACTAGCAACCAGACCTACTATGACTGGGCAGAGCGCATC
TGGGACTGGTCGGTCACGACGCCACTGTTGAGCAACTCAACCTGGAACGT
CGCAGACTCGACGTCAACCACAAACGACTGCAGCACCCAGGGCGATAACC
AGTGGAGCTATAACTACGGCGCCTACCTAGGAGGAGCCGCATACATGTAC
AATTACGTAGGTGGACCCACCGCATTGAGAGACGATCAACTCCTAACCTA
TCACAGACCAACGGTACCAGCACCAAATGGATGAACGCTGTCGATGGCCT
GTTGAATCGCACCTTGAACAAGTTCTTCCCCGCAAGCCACGGCGGTGAAA
TCCTGACGGAGATTCTATGCGAACCGACCGAGGTGTGCAACGACAACGAA
ATCATCTTCAAGGGCCTGGTGTCTGCCTGGCTCGCCTACACAGCCTTACT
GGTTCCATCCACCTACGATAGAATCCTGCCCAAGCTGCAGGGATCTGCCC
AGGGCGCTGCCGCAACTTGCACCGGTTATGGTAACAATACCTGCGGTGTG
CGATGGTGGAACAGTACTTGGGATGGCTGGAGCGGTCTCGAGGAACAGAT
GAGCGTTACCAGCGTCTTCTCGTCGAATATGATCGCCTTCTCCAACTCCT
CGGCTGCACCGTTGACCTCCAGCACGGGAGGCAACAGCACCAGCAATCCA
TCGGCCGGAACCGATGACAGCTCCGATGACAAGACGATCCTCAGCACGAT
TACCACGGGAGACCGTGCGGGAGCGGGCATCGTGACAGTTGTTTTTGCTG
GAGGATGGGTAGGGTTGATGGCATGGTTGATGCTCGGTTAA back to topCoding sequence (CDS) from alignment at OGUI01000010.1:1321505..1322845+ >ATCC64974_67030-T1 ID=ATCC64974_67030-T1|Name=ATCC64974_67030-T1|organism=Aspergillus niger N402|type=CDS|length=3717bp|location=Sequence derived from alignment at OGUI01000010.1:1321505..1322845+ (Aspergillus niger N402) ATGAAGCACTACAAAGGAAACGAGTCCGGCGAAATCCCGGGCAAGATCCC CAACACTTGGTGGGAAGGTGGCGCCATGTTCATGACACTCATGCAATACT ATCACTACACGGGGGATTCCACCTACAACAAGGAAGTCATCCAGGGCATG CAGTGGCAGGCGGGCGATTGTGACTACATGCCGGCGAACTGGAGTAGCTA CATTGGAAATGACGATCAAATGTTCTGGGGCTTGGCCGCTATGACTGGTG CTGAACTGAACTTTCCCGACTCTAGCGATGGGTACTCCTGGCTTTCTCTA GCACAGGGTGTTTTCAACACCCAGGTCGCCCGCTGGGATAATTCTACCTG CAACGGGGGTATGCGGTGGCAGATTTATACCTACGAATCCGGTTATACCA TGAAGAACGCCATTTCCAACGGTGGTCTGTTTCAATTATCGGCTCGTCTG GCGCGCTATACTAGCAACCAGACCTACTATGACTGGGCAGAGCGCATCTG GGACTGGTCGGTCACGACGCCACTGTTGAGCAACTCAACCTGGAACGTCG CAGACTCGACGTCAACCACAAACGACTGCAGCACCCAGGGCGATAACCAG TGGAGCTATAACTACGGCGCCTACCTAGGAGGAGCCGCATACATGTACAA TTACACCAACGGTACCAGCACCAAATGGATGAACGCTGTCGATGGCCTGT TGAATCGCACCTTGAACAAGTTCTTCCCCGCAAGCCACGGCGGTGAAATC CTGACGGAGATTCTATGCGAACCGACCGAGGTGTGCAACGACAACGAAAT CATCTTCAAGGGCCTGGTGTCTGCCTGGCTCGCCTACACAGCCTTACTGG TTCCATCCACCTACGATAGAATCCTGCCCAAGCTGCAGGGATCTGCCCAG GGCGCTGCCGCAACTTGCACCGGTTATGGTAACAATACCTGCGGTGTGCG ATGGTGGAACAGTACTTGGGATGGCTGGAGCGGTCTCGAGGAACAGATGA GCGTTACCAGCGTCTTCTCGTCGAATATGATCGCCTTCTCCAACTCCTCG GCTGCACCGTTGACCTCCAGCACGGGAGGCAACAGCACCAGCAATCCATC GGCCGGAACCGATGACAGCTCCGATGACAAGACGATCCTCAGCACGATTA CCACGGGAGACCGTGCGGGAGCGGGCATCGTGACAGTTGTTTTTGCTGGA GGATGGGTAGGGTTGATGGCATGGTTGATGCTCGGTTAAATGAAGCACTA CAAAGGAAACGAGTCCGGCGAAATCCCGGGCAAGATCCCCAACACTTGGT GGGAAGGTGGCGCCATGTTCATGACACTCATGCAATACTATCACTACACG GGGGATTCCACCTACAACAAGGAAGTCATCCAGGGCATGCAGTGGCAGGC GGGCGATTGTGACTACATGCCGGCGAACTGGAGTAGCTACATTGGAAATG ACGATCAAATGTTCTGGGGCTTGGCCGCTATGACTGGTGCTGAACTGAAC TTTCCCGACTCTAGCGATGGGTACTCCTGGCTTTCTCTAGCACAGGGTGT TTTCAACACCCAGGTCGCCCGCTGGGATAATTCTACCTGCAACGGGGGTA TGCGGTGGCAGATTTATACCTACGAATCCGGTTATACCATGAAGAACGCC ATTTCCAACGGTGGTCTGTTTCAATTATCGGCTCGTCTGGCGCGCTATAC TAGCAACCAGACCTACTATGACTGGGCAGAGCGCATCTGGGACTGGTCGG TCACGACGCCACTGTTGAGCAACTCAACCTGGAACGTCGCAGACTCGACG TCAACCACAAACGACTGCAGCACCCAGGGCGATAACCAGTGGAGCTATAA CTACGGCGCCTACCTAGGAGGAGCCGCATACATGTACAATTACACCAACG GTACCAGCACCAAATGGATGAACGCTGTCGATGGCCTGTTGAATCGCACC TTGAACAAGTTCTTCCCCGCAAGCCACGGCGGTGAAATCCTGACGGAGAT TCTATGCGAACCGACCGAGGTGTGCAACGACAACGAAATCATCTTCAAGG GCCTGGTGTCTGCCTGGCTCGCCTACACAGCCTTACTGGTTCCATCCACC TACGATAGAATCCTGCCCAAGCTGCAGGGATCTGCCCAGGGCGCTGCCGC AACTTGCACCGGTTATGGTAACAATACCTGCGGTGTGCGATGGTGGAACA GTACTTGGGATGGCTGGAGCGGTCTCGAGGAACAGATGAGCGTTACCAGC GTCTTCTCGTCGAATATGATCGCCTTCTCCAACTCCTCGGCTGCACCGTT GACCTCCAGCACGGGAGGCAACAGCACCAGCAATCCATCGGCCGGAACCG ATGACAGCTCCGATGACAAGACGATCCTCAGCACGATTACCACGGGAGAC CGTGCGGGAGCGGGCATCGTGACAGTTGTTTTTGCTGGAGGATGGGTAGG GTTGATGGCATGGTTGATGCTCGGTTAAATGAAGCACTACAAAGGAAACG AGTCCGGCGAAATCCCGGGCAAGATCCCCAACACTTGGTGGGAAGGTGGC GCCATGTTCATGACACTCATGCAATACTATCACTACACGGGGGATTCCAC CTACAACAAGGAAGTCATCCAGGGCATGCAGTGGCAGGCGGGCGATTGTG ACTACATGCCGGCGAACTGGAGTAGCTACATTGGAAATGACGATCAAATG TTCTGGGGCTTGGCCGCTATGACTGGTGCTGAACTGAACTTTCCCGACTC TAGCGATGGGTACTCCTGGCTTTCTCTAGCACAGGGTGTTTTCAACACCC AGGTCGCCCGCTGGGATAATTCTACCTGCAACGGGGGTATGCGGTGGCAG ATTTATACCTACGAATCCGGTTATACCATGAAGAACGCCATTTCCAACGG TGGTCTGTTTCAATTATCGGCTCGTCTGGCGCGCTATACTAGCAACCAGA CCTACTATGACTGGGCAGAGCGCATCTGGGACTGGTCGGTCACGACGCCA CTGTTGAGCAACTCAACCTGGAACGTCGCAGACTCGACGTCAACCACAAA CGACTGCAGCACCCAGGGCGATAACCAGTGGAGCTATAACTACGGCGCCT ACCTAGGAGGAGCCGCATACATGTACAATTACACCAACGGTACCAGCACC AAATGGATGAACGCTGTCGATGGCCTGTTGAATCGCACCTTGAACAAGTT CTTCCCCGCAAGCCACGGCGGTGAAATCCTGACGGAGATTCTATGCGAAC CGACCGAGGTGTGCAACGACAACGAAATCATCTTCAAGGGCCTGGTGTCT GCCTGGCTCGCCTACACAGCCTTACTGGTTCCATCCACCTACGATAGAAT CCTGCCCAAGCTGCAGGGATCTGCCCAGGGCGCTGCCGCAACTTGCACCG GTTATGGTAACAATACCTGCGGTGTGCGATGGTGGAACAGTACTTGGGAT GGCTGGAGCGGTCTCGAGGAACAGATGAGCGTTACCAGCGTCTTCTCGTC GAATATGATCGCCTTCTCCAACTCCTCGGCTGCACCGTTGACCTCCAGCA CGGGAGGCAACAGCACCAGCAATCCATCGGCCGGAACCGATGACAGCTCC GATGACAAGACGATCCTCAGCACGATTACCACGGGAGACCGTGCGGGAGC GGGCATCGTGACAGTTGTTTTTGCTGGAGGATGGGTAGGGTTGATGGCAT GGTTGATGCTCGGTTAA back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Molecular Function
Term | Definition |
GO:0003824 | catalytic activity |
GO:0008496 | mannan endo-1,6-alpha-mannosidase activity |
Vocabulary: Biological Process
Term | Definition |
GO:0016052 | carbohydrate catabolic process |
Relationships
This mRNA is a part of the following gene feature(s):
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Feature Name | Unique Name | Species | Type |
ATCC64974_67030-T1 | ATCC64974_67030-T1-protein | Aspergillus niger N402 | polypeptide |
Properties
Property Name | Value |
Note | CAZy:GH76 |
DBxref | InterPro:IPR008928 |
DBxref | InterPro:IPR014480 |
DBxref | InterPro:IPR005198 |
DBxref | PFAM:PF03663 |
Product | hypothetical protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
Aligned Feature | Feature Type | Alignment Location |
OGUI01000010.1 | supercontig | OGUI01000010.1:1321505..1322845 + |
|