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ATCC64974_67030-T1, ATCC64974_67030-T1 (mRNA) Aspergillus niger N402

Overview
NameATCC64974_67030-T1
Unique NameATCC64974_67030-T1
TypemRNA
OrganismAspergillus niger N402
Sequences
The following sequences are available for this feature:

mRNA from alignment at OGUI01000010.1:1321505..1322845+

Legend: exonpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>ATCC64974_67030-T1 ID=ATCC64974_67030-T1|Name=ATCC64974_67030-T1|organism=Aspergillus niger N402|type=mRNA|length=1341bp|location=Sequence derived from alignment at OGUI01000010.1:1321505..1322845+ (Aspergillus niger N402)
ATGAAGCACTACAAAGGAAACGAGTCCGGCGAAATCCCGGGCAAGATCCC
CAACACTTGGTGGGAAGGTGGCGCCATGTTCATGACACTCATGCAATACT
ATCACTACACGGGGGATTCCACCTACAACAAGGAAGTCATCCAGGGCATG
CAGTGGCAGGCGGGCGATTGTGACTACATGCCGGCGAACTGGAGTAGCTA
CATTGTGAGTTCCTCGCTTATGGCAGCCCCTTTCCCCTACTAATTGAGGA
TCTCAGGGAAATGACGATCAAATGTTCTGGGGCTTGGCCGCTATGACTGG
TGCTGAACTGAACTTTCCCGACTCTAGCGATGGGTACTCCTGGCTTTCTC
TAGCACAGGGTGTTTTCAACACCCAGGTCGCCCGCTGGGATAATTCTACC
TGCAACGGGGGTATGCGGTGGCAGATTTATACCTACGAATCCGGTTATAC
CATGAAGAACGCCATTTCCAACGGTGGTCTGTTTCAATTATCGGCTCGTC
TGGCGCGCTATACTAGCAACCAGACCTACTATGACTGGGCAGAGCGCATC
TGGGACTGGTCGGTCACGACGCCACTGTTGAGCAACTCAACCTGGAACGT
CGCAGACTCGACGTCAACCACAAACGACTGCAGCACCCAGGGCGATAACC
AGTGGAGCTATAACTACGGCGCCTACCTAGGAGGAGCCGCATACATGTAC
AATTACGTAGGTGGACCCACCGCATTGAGAGACGATCAACTCCTAACCTA
TCACAGACCAACGGTACCAGCACCAAATGGATGAACGCTGTCGATGGCCT
GTTGAATCGCACCTTGAACAAGTTCTTCCCCGCAAGCCACGGCGGTGAAA
TCCTGACGGAGATTCTATGCGAACCGACCGAGGTGTGCAACGACAACGAA
ATCATCTTCAAGGGCCTGGTGTCTGCCTGGCTCGCCTACACAGCCTTACT
GGTTCCATCCACCTACGATAGAATCCTGCCCAAGCTGCAGGGATCTGCCC
AGGGCGCTGCCGCAACTTGCACCGGTTATGGTAACAATACCTGCGGTGTG
CGATGGTGGAACAGTACTTGGGATGGCTGGAGCGGTCTCGAGGAACAGAT
GAGCGTTACCAGCGTCTTCTCGTCGAATATGATCGCCTTCTCCAACTCCT
CGGCTGCACCGTTGACCTCCAGCACGGGAGGCAACAGCACCAGCAATCCA
TCGGCCGGAACCGATGACAGCTCCGATGACAAGACGATCCTCAGCACGAT
TACCACGGGAGACCGTGCGGGAGCGGGCATCGTGACAGTTGTTTTTGCTG
GAGGATGGGTAGGGTTGATGGCATGGTTGATGCTCGGTTAA
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Coding sequence (CDS) from alignment at OGUI01000010.1:1321505..1322845+

>ATCC64974_67030-T1 ID=ATCC64974_67030-T1|Name=ATCC64974_67030-T1|organism=Aspergillus niger N402|type=CDS|length=3717bp|location=Sequence derived from alignment at OGUI01000010.1:1321505..1322845+ (Aspergillus niger N402)
ATGAAGCACTACAAAGGAAACGAGTCCGGCGAAATCCCGGGCAAGATCCC
CAACACTTGGTGGGAAGGTGGCGCCATGTTCATGACACTCATGCAATACT
ATCACTACACGGGGGATTCCACCTACAACAAGGAAGTCATCCAGGGCATG
CAGTGGCAGGCGGGCGATTGTGACTACATGCCGGCGAACTGGAGTAGCTA
CATTGGAAATGACGATCAAATGTTCTGGGGCTTGGCCGCTATGACTGGTG
CTGAACTGAACTTTCCCGACTCTAGCGATGGGTACTCCTGGCTTTCTCTA
GCACAGGGTGTTTTCAACACCCAGGTCGCCCGCTGGGATAATTCTACCTG
CAACGGGGGTATGCGGTGGCAGATTTATACCTACGAATCCGGTTATACCA
TGAAGAACGCCATTTCCAACGGTGGTCTGTTTCAATTATCGGCTCGTCTG
GCGCGCTATACTAGCAACCAGACCTACTATGACTGGGCAGAGCGCATCTG
GGACTGGTCGGTCACGACGCCACTGTTGAGCAACTCAACCTGGAACGTCG
CAGACTCGACGTCAACCACAAACGACTGCAGCACCCAGGGCGATAACCAG
TGGAGCTATAACTACGGCGCCTACCTAGGAGGAGCCGCATACATGTACAA
TTACACCAACGGTACCAGCACCAAATGGATGAACGCTGTCGATGGCCTGT
TGAATCGCACCTTGAACAAGTTCTTCCCCGCAAGCCACGGCGGTGAAATC
CTGACGGAGATTCTATGCGAACCGACCGAGGTGTGCAACGACAACGAAAT
CATCTTCAAGGGCCTGGTGTCTGCCTGGCTCGCCTACACAGCCTTACTGG
TTCCATCCACCTACGATAGAATCCTGCCCAAGCTGCAGGGATCTGCCCAG
GGCGCTGCCGCAACTTGCACCGGTTATGGTAACAATACCTGCGGTGTGCG
ATGGTGGAACAGTACTTGGGATGGCTGGAGCGGTCTCGAGGAACAGATGA
GCGTTACCAGCGTCTTCTCGTCGAATATGATCGCCTTCTCCAACTCCTCG
GCTGCACCGTTGACCTCCAGCACGGGAGGCAACAGCACCAGCAATCCATC
GGCCGGAACCGATGACAGCTCCGATGACAAGACGATCCTCAGCACGATTA
CCACGGGAGACCGTGCGGGAGCGGGCATCGTGACAGTTGTTTTTGCTGGA
GGATGGGTAGGGTTGATGGCATGGTTGATGCTCGGTTAAATGAAGCACTA
CAAAGGAAACGAGTCCGGCGAAATCCCGGGCAAGATCCCCAACACTTGGT
GGGAAGGTGGCGCCATGTTCATGACACTCATGCAATACTATCACTACACG
GGGGATTCCACCTACAACAAGGAAGTCATCCAGGGCATGCAGTGGCAGGC
GGGCGATTGTGACTACATGCCGGCGAACTGGAGTAGCTACATTGGAAATG
ACGATCAAATGTTCTGGGGCTTGGCCGCTATGACTGGTGCTGAACTGAAC
TTTCCCGACTCTAGCGATGGGTACTCCTGGCTTTCTCTAGCACAGGGTGT
TTTCAACACCCAGGTCGCCCGCTGGGATAATTCTACCTGCAACGGGGGTA
TGCGGTGGCAGATTTATACCTACGAATCCGGTTATACCATGAAGAACGCC
ATTTCCAACGGTGGTCTGTTTCAATTATCGGCTCGTCTGGCGCGCTATAC
TAGCAACCAGACCTACTATGACTGGGCAGAGCGCATCTGGGACTGGTCGG
TCACGACGCCACTGTTGAGCAACTCAACCTGGAACGTCGCAGACTCGACG
TCAACCACAAACGACTGCAGCACCCAGGGCGATAACCAGTGGAGCTATAA
CTACGGCGCCTACCTAGGAGGAGCCGCATACATGTACAATTACACCAACG
GTACCAGCACCAAATGGATGAACGCTGTCGATGGCCTGTTGAATCGCACC
TTGAACAAGTTCTTCCCCGCAAGCCACGGCGGTGAAATCCTGACGGAGAT
TCTATGCGAACCGACCGAGGTGTGCAACGACAACGAAATCATCTTCAAGG
GCCTGGTGTCTGCCTGGCTCGCCTACACAGCCTTACTGGTTCCATCCACC
TACGATAGAATCCTGCCCAAGCTGCAGGGATCTGCCCAGGGCGCTGCCGC
AACTTGCACCGGTTATGGTAACAATACCTGCGGTGTGCGATGGTGGAACA
GTACTTGGGATGGCTGGAGCGGTCTCGAGGAACAGATGAGCGTTACCAGC
GTCTTCTCGTCGAATATGATCGCCTTCTCCAACTCCTCGGCTGCACCGTT
GACCTCCAGCACGGGAGGCAACAGCACCAGCAATCCATCGGCCGGAACCG
ATGACAGCTCCGATGACAAGACGATCCTCAGCACGATTACCACGGGAGAC
CGTGCGGGAGCGGGCATCGTGACAGTTGTTTTTGCTGGAGGATGGGTAGG
GTTGATGGCATGGTTGATGCTCGGTTAAATGAAGCACTACAAAGGAAACG
AGTCCGGCGAAATCCCGGGCAAGATCCCCAACACTTGGTGGGAAGGTGGC
GCCATGTTCATGACACTCATGCAATACTATCACTACACGGGGGATTCCAC
CTACAACAAGGAAGTCATCCAGGGCATGCAGTGGCAGGCGGGCGATTGTG
ACTACATGCCGGCGAACTGGAGTAGCTACATTGGAAATGACGATCAAATG
TTCTGGGGCTTGGCCGCTATGACTGGTGCTGAACTGAACTTTCCCGACTC
TAGCGATGGGTACTCCTGGCTTTCTCTAGCACAGGGTGTTTTCAACACCC
AGGTCGCCCGCTGGGATAATTCTACCTGCAACGGGGGTATGCGGTGGCAG
ATTTATACCTACGAATCCGGTTATACCATGAAGAACGCCATTTCCAACGG
TGGTCTGTTTCAATTATCGGCTCGTCTGGCGCGCTATACTAGCAACCAGA
CCTACTATGACTGGGCAGAGCGCATCTGGGACTGGTCGGTCACGACGCCA
CTGTTGAGCAACTCAACCTGGAACGTCGCAGACTCGACGTCAACCACAAA
CGACTGCAGCACCCAGGGCGATAACCAGTGGAGCTATAACTACGGCGCCT
ACCTAGGAGGAGCCGCATACATGTACAATTACACCAACGGTACCAGCACC
AAATGGATGAACGCTGTCGATGGCCTGTTGAATCGCACCTTGAACAAGTT
CTTCCCCGCAAGCCACGGCGGTGAAATCCTGACGGAGATTCTATGCGAAC
CGACCGAGGTGTGCAACGACAACGAAATCATCTTCAAGGGCCTGGTGTCT
GCCTGGCTCGCCTACACAGCCTTACTGGTTCCATCCACCTACGATAGAAT
CCTGCCCAAGCTGCAGGGATCTGCCCAGGGCGCTGCCGCAACTTGCACCG
GTTATGGTAACAATACCTGCGGTGTGCGATGGTGGAACAGTACTTGGGAT
GGCTGGAGCGGTCTCGAGGAACAGATGAGCGTTACCAGCGTCTTCTCGTC
GAATATGATCGCCTTCTCCAACTCCTCGGCTGCACCGTTGACCTCCAGCA
CGGGAGGCAACAGCACCAGCAATCCATCGGCCGGAACCGATGACAGCTCC
GATGACAAGACGATCCTCAGCACGATTACCACGGGAGACCGTGCGGGAGC
GGGCATCGTGACAGTTGTTTTTGCTGGAGGATGGGTAGGGTTGATGGCAT
GGTTGATGCTCGGTTAA
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Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Molecular Function
TermDefinition
GO:0003824catalytic activity
GO:0008496mannan endo-1,6-alpha-mannosidase activity
Vocabulary: Biological Process
TermDefinition
GO:0016052carbohydrate catabolic process
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
ATCC64974_67030ATCC64974_67030Aspergillus niger N402gene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ATCC64974_67030-T1.exon1ATCC64974_67030-T1.exon1Aspergillus niger N402exon
ATCC64974_67030-T1.exon2ATCC64974_67030-T1.exon2Aspergillus niger N402exon
ATCC64974_67030-T1.exon3ATCC64974_67030-T1.exon3Aspergillus niger N402exon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ATCC64974_67030-T1.cdsATCC64974_67030-T1.cdsAspergillus niger N402CDS


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
ATCC64974_67030-T1ATCC64974_67030-T1-proteinAspergillus niger N402polypeptide


Properties
Property NameValue
NoteCAZy:GH76
DBxrefInterPro:IPR008928
DBxrefInterPro:IPR014480
DBxrefInterPro:IPR005198
DBxrefPFAM:PF03663
Producthypothetical protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger N402 whole genome analysis2021-11-01
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
OGUI01000010.1supercontigOGUI01000010.1:1321505..1322845 +
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