You are here

Home

ATCC64974_67160-T1, ATCC64974_67160-T1 (mRNA) Aspergillus niger N402

Overview
NameATCC64974_67160-T1
Unique NameATCC64974_67160-T1
TypemRNA
OrganismAspergillus niger N402
Sequences
The following sequences are available for this feature:

mRNA from alignment at OGUI01000010.1:1353881..1355649+

Legend: exonpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>ATCC64974_67160-T1 ID=ATCC64974_67160-T1|Name=ATCC64974_67160-T1|organism=Aspergillus niger N402|type=mRNA|length=1769bp|location=Sequence derived from alignment at OGUI01000010.1:1353881..1355649+ (Aspergillus niger N402)
ATGGTTTCTCCACGGACACTATTCACGGCCAGCCGCGTGCAAACATGGAC
CTACCTGCTTGGCGTGTGTCCATTCTCGATCGCATTCCTGGTCTTCATCA
ACTCGTCCATCTCATTTGTCGTCACGGAATTAATTGGACTCCGTAATGGA
GAAGGTGATGCGGTCGGAACCTTGGGCTTTGCCGACGAACTGCTGGCCCT
GGTTGCCTGCCCCTTGTGGGGAGTGCTGTCGGATCGCATCGGCGTCCGTC
ATGTAAGCGCTCATCCGTTGTTGCTACTTTCCCGCCCCAAAGGCCAGTTC
ACTTGTAAATTTTCTCATACATTGTATCTTTTACACAGGTCTGCACTACC
GGCTATGCTATCGTGGCTCTTGCCTTGGTACTCTTCGTCCAGGCAAAAAA
TGTCTACCCCCAGTTACTCCTGGGAAGACTGTTGTTCAGTCTTGGAGGCG
CCGCAGTATCAACGATGGTCACGGCGGTTCTTCCAGCCGTAGCCGGCTCA
CACTCGTCGTCACAGCATAAATCTACATCAGACTCTCGGACGAGTACGAG
CTCATCCTCCCGACTGGCTGGATTTGTAGGCATGTGTGCCGGATGTGGTG
CGCTCGTTGCTCTCGTTGTCTTCCTCCCCCTTCCAGCTCGGTTCCAGCAA
TGGGGTCTCTCACCAGCAGAAGCTATCCAGCGCAGCTACTATCTCGTGGC
TGCGGTATCTCTAGTTATCAGTATCCTCTGTTTCTTTGGGCTGAGGAACC
TCCCCGGAGAAGAGGGCAAATCATGGAGCGTGTTATGGTCCGCACGCCGG
CGCGGGACGCCGGATAGCGGCGAGGCGTGTTCGTATGCTCGCAAATTCCA
GTTGCCTTATCTCGAGCAGCTGGGCATTGCGTTCGCCTTGGGGTTCCGGA
ATTCAGATATATTTCTGGGTTACTTGGGCGGTTTCGTGGCGCGTGCGTCG
TCCGTGGGGATCTCGCTGTTCATCCCGCTCGCTGTTAACCACTATTATCG
CATGTCGGGGCTGTGCGGGAGCCAAGATGGCGAGGCTGAGAACCCTGGCG
ACTTAAAGAAATCATGCCATAAAGCCTACGTGCTCGCTTCGATTTTAACA
GGGGTCTCTCAGCTAGTCGCGCTGCTTGCAGCGCCAGCCTTCGGCTATCT
GTCGGAGCGATCGCGGCGCCGTCACGTGCCGCTTTTGGCAGCTTGCTTTG
CAGGCTTTGTGGGCTATACCACCTTTGCCTTGCTACCGAGTCCGGAATTC
AATGGGGAGTATGGCAGCCCCGGTGTATTTGTAGTGATGGGCCTGGTTGG
TATCAGCCAGATTGGAGCGATTGTCTGCAGTTTATCAGTACTGAGCAGCG
GCATTCTCAGTTTGAGCGAGGTAGGTAGGATGGACGACCAGTTATGGAGT
ACCCCGAGTGAACCCAGCGAGGATGAGGGTGAGGATGAGGATGAAAATGA
GAACAACAATGAGAACAACCCAGTCGACGACGAGGAAGAGGAGCACGGAG
AAGACCGACCTCTCATGACCCATCGTCCCGGCCGGAAAGAGCGGCACCTT
TCGCACTTGAAGGGATCAATTGCTGGGGTGTATTCCCTGTACGGTGGAGC
GGGTATCCTGCTCTTGACCAAGCTGGGTGGGCTCTTGTTCGATGTGCTGT
CGTCGGGAGCACCGTTCTACATCATGGCTGGGTTCAATGGGGCATTGCTG
CTGGCAGGCCTGGTGAGTGGATTCATTGGGCACTCAAGATCCGCTGGACC
AGCTGGGTTCGGTGTGTAG
back to top

Coding sequence (CDS) from alignment at OGUI01000010.1:1353881..1355649+

>ATCC64974_67160-T1 ID=ATCC64974_67160-T1|Name=ATCC64974_67160-T1|organism=Aspergillus niger N402|type=CDS|length=3366bp|location=Sequence derived from alignment at OGUI01000010.1:1353881..1355649+ (Aspergillus niger N402)
ATGGTTTCTCCACGGACACTATTCACGGCCAGCCGCGTGCAAACATGGAC
CTACCTGCTTGGCGTGTGTCCATTCTCGATCGCATTCCTGGTCTTCATCA
ACTCGTCCATCTCATTTGTCGTCACGGAATTAATTGGACTCCGTAATGGA
GAAGGTGATGCGGTCGGAACCTTGGGCTTTGCCGACGAACTGCTGGCCCT
GGTTGCCTGCCCCTTGTGGGGAGTGCTGTCGGATCGCATCGGCGTCCGTC
ATGTCTGCACTACCGGCTATGCTATCGTGGCTCTTGCCTTGGTACTCTTC
GTCCAGGCAAAAAATGTCTACCCCCAGTTACTCCTGGGAAGACTGTTGTT
CAGTCTTGGAGGCGCCGCAGTATCAACGATGGTCACGGCGGTTCTTCCAG
CCGTAGCCGGCTCACACTCGTCGTCACAGCATAAATCTACATCAGACTCT
CGGACGAGTACGAGCTCATCCTCCCGACTGGCTGGATTTGTAGGCATGTG
TGCCGGATGTGGTGCGCTCGTTGCTCTCGTTGTCTTCCTCCCCCTTCCAG
CTCGGTTCCAGCAATGGGGTCTCTCACCAGCAGAAGCTATCCAGCGCAGC
TACTATCTCGTGGCTGCGGTATCTCTAGTTATCAGTATCCTCTGTTTCTT
TGGGCTGAGGAACCTCCCCGGAGAAGAGGGCAAATCATGGAGCGTGTTAT
GGTCCGCACGCCGGCGCGGGACGCCGGATAGCGGCGAGGCGTGTTCGTAT
GCTCGCAAATTCCAGTTGCCTTATCTCGAGCAGCTGGGCATTGCGTTCGC
CTTGGGGTTCCGGAATTCAGATATATTTCTGGGTTACTTGGGCGGTTTCG
TGGCGCGTGCGTCGTCCGTGGGGATCTCGCTGTTCATCCCGCTCGCTGTT
AACCACTATTATCGCATGTCGGGGCTGTGCGGGAGCCAAGATGGCGAGGC
TGAGAACCCTGGCGACTTAAAGAAATCATGCCATAAAGCCTACGTGCTCG
CTTCGATTTTAACAGGGGTCTCTCAGCTAGTCGCGCTGCTTGCAGCGCCA
GCCTTCGGCTATCTGTCGGAGCGATCGCGGCGCCGTCACGTGCCGCTTTT
GGCAGCTTGCTTTGCAGGCTTTGTGGGCTATACCACCTTTGCCTTGCTAC
CGAGTCCGGAATTCAATGGGGAGTATGGCAGCCCCGGTGTATTTGTAGTG
ATGGGCCTGGTTGGTATCAGCCAGATTGGAGCGATTGTCTGCAGTTTATC
AGTACTGAGCAGCGGCATTCTCAGTTTGAGCGAGGTAGGTAGGATGGACG
ACCAGTTATGGAGTACCCCGAGTGAACCCAGCGAGGATGAGGGTGAGGAT
GAGGATGAAAATGAGAACAACAATGAGAACAACCCAGTCGACGACGAGGA
AGAGGAGCACGGAGAAGACCGACCTCTCATGACCCATCGTCCCGGCCGGA
AAGAGCGGCACCTTTCGCACTTGAAGGGATCAATTGCTGGGGTGTATTCC
CTGTACGGTGGAGCGGGTATCCTGCTCTTGACCAAGCTGGGTGGGCTCTT
GTTCGATGTGCTGTCGTCGGGAGCACCGTTCTACATCATGGCTGGGTTCA
ATGGGGCATTGCTGCTGGCAGGCCTGGTGAGTGGATTCATTGGGCACTCA
AGATCCGCTGGACCAGCTGGGTTCGGTGTGTAGATGGTTTCTCCACGGAC
ACTATTCACGGCCAGCCGCGTGCAAACATGGACCTACCTGCTTGGCGTGT
GTCCATTCTCGATCGCATTCCTGGTCTTCATCAACTCGTCCATCTCATTT
GTCGTCACGGAATTAATTGGACTCCGTAATGGAGAAGGTGATGCGGTCGG
AACCTTGGGCTTTGCCGACGAACTGCTGGCCCTGGTTGCCTGCCCCTTGT
GGGGAGTGCTGTCGGATCGCATCGGCGTCCGTCATGTCTGCACTACCGGC
TATGCTATCGTGGCTCTTGCCTTGGTACTCTTCGTCCAGGCAAAAAATGT
CTACCCCCAGTTACTCCTGGGAAGACTGTTGTTCAGTCTTGGAGGCGCCG
CAGTATCAACGATGGTCACGGCGGTTCTTCCAGCCGTAGCCGGCTCACAC
TCGTCGTCACAGCATAAATCTACATCAGACTCTCGGACGAGTACGAGCTC
ATCCTCCCGACTGGCTGGATTTGTAGGCATGTGTGCCGGATGTGGTGCGC
TCGTTGCTCTCGTTGTCTTCCTCCCCCTTCCAGCTCGGTTCCAGCAATGG
GGTCTCTCACCAGCAGAAGCTATCCAGCGCAGCTACTATCTCGTGGCTGC
GGTATCTCTAGTTATCAGTATCCTCTGTTTCTTTGGGCTGAGGAACCTCC
CCGGAGAAGAGGGCAAATCATGGAGCGTGTTATGGTCCGCACGCCGGCGC
GGGACGCCGGATAGCGGCGAGGCGTGTTCGTATGCTCGCAAATTCCAGTT
GCCTTATCTCGAGCAGCTGGGCATTGCGTTCGCCTTGGGGTTCCGGAATT
CAGATATATTTCTGGGTTACTTGGGCGGTTTCGTGGCGCGTGCGTCGTCC
GTGGGGATCTCGCTGTTCATCCCGCTCGCTGTTAACCACTATTATCGCAT
GTCGGGGCTGTGCGGGAGCCAAGATGGCGAGGCTGAGAACCCTGGCGACT
TAAAGAAATCATGCCATAAAGCCTACGTGCTCGCTTCGATTTTAACAGGG
GTCTCTCAGCTAGTCGCGCTGCTTGCAGCGCCAGCCTTCGGCTATCTGTC
GGAGCGATCGCGGCGCCGTCACGTGCCGCTTTTGGCAGCTTGCTTTGCAG
GCTTTGTGGGCTATACCACCTTTGCCTTGCTACCGAGTCCGGAATTCAAT
GGGGAGTATGGCAGCCCCGGTGTATTTGTAGTGATGGGCCTGGTTGGTAT
CAGCCAGATTGGAGCGATTGTCTGCAGTTTATCAGTACTGAGCAGCGGCA
TTCTCAGTTTGAGCGAGGTAGGTAGGATGGACGACCAGTTATGGAGTACC
CCGAGTGAACCCAGCGAGGATGAGGGTGAGGATGAGGATGAAAATGAGAA
CAACAATGAGAACAACCCAGTCGACGACGAGGAAGAGGAGCACGGAGAAG
ACCGACCTCTCATGACCCATCGTCCCGGCCGGAAAGAGCGGCACCTTTCG
CACTTGAAGGGATCAATTGCTGGGGTGTATTCCCTGTACGGTGGAGCGGG
TATCCTGCTCTTGACCAAGCTGGGTGGGCTCTTGTTCGATGTGCTGTCGT
CGGGAGCACCGTTCTACATCATGGCTGGGTTCAATGGGGCATTGCTGCTG
GCAGGCCTGGTGAGTGGATTCATTGGGCACTCAAGATCCGCTGGACCAGC
TGGGTTCGGTGTGTAG
back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Cellular Component
TermDefinition
GO:0005887integral component of plasma membrane
Vocabulary: Biological Process
TermDefinition
GO:0055085transmembrane transport
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
ATCC64974_67160ATCC64974_67160Aspergillus niger N402gene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ATCC64974_67160-T1.exon1ATCC64974_67160-T1.exon1Aspergillus niger N402exon
ATCC64974_67160-T1.exon2ATCC64974_67160-T1.exon2Aspergillus niger N402exon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ATCC64974_67160-T1.cdsATCC64974_67160-T1.cdsAspergillus niger N402CDS


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
ATCC64974_67160-T1ATCC64974_67160-T1-proteinAspergillus niger N402polypeptide


Properties
Property NameValue
NoteEggNog:ENOG41
DBxrefInterPro:IPR036259
DBxrefInterPro:IPR011701
DBxrefPFAM:PF07690
Producthypothetical protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger N402 whole genome analysis2021-11-01
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
OGUI01000010.1supercontigOGUI01000010.1:1353881..1355649 +
Powered by Drupal