You are here

Home

ATCC64974_67370-T1, ATCC64974_67370-T1 (mRNA) Aspergillus niger N402

Overview
NameATCC64974_67370-T1
Unique NameATCC64974_67370-T1
TypemRNA
OrganismAspergillus niger N402
Sequences
The following sequences are available for this feature:

mRNA from alignment at OGUI01000010.1:1423707..1424368-

Legend: polypeptideCDSexon
Hold the cursor over a type above to highlight its positions in the sequence below.
>ATCC64974_67370-T1 ID=ATCC64974_67370-T1|Name=ATCC64974_67370-T1|organism=Aspergillus niger N402|type=mRNA|length=662bp|location=Sequence derived from alignment at OGUI01000010.1:1423707..1424368- (Aspergillus niger N402)
ATGTCCCTAATCACACCACCCCCCATCACCATCGTACGTTACTCTCCTCC
TTCCCCACATCCATTCCAAGAAAAAATAAGAAAACAAAAATCTAACCCGC
ACAGGAAGACCTCCATGCTTTCCAAGCAAAACACTTCCCGGGAAGCATCA
TCGCCCACCAGACACCACAACCGCAAGCAGTGACCAACACCAACCTCCCC
GAAGAATACACCTCACATGACTACGAAGAACAATACGACTGGAATGAAGA
ATATGAAGAAGAAGATGAAGATCTAGGCTACTACCCCGACGGCGTGAAAC
GCACACTCACGGACGAACAAATCCGCATTTTCAGACATAGTGAGATCCAT
GCCTTGAGGAGGGAGAAGGAGTTGCGTGAGGAGGAGGAGGCGGATGCTGC
TGCTTCCGCTGCTGCTGCTGAAGCTGAAGCGGCTGCAGAGCATGCGGTAG
ATGCAGGTGCGGATGTAGGCGCAGATGCGAACGCAAAGACAGATGCTGCT
GGTACGGAACAAGCGAGCAAGTCTCGGGTAGAAGGGGAAGATACAGATGT
GAAGATGGATTATGGGGATGGGGGTGTTTCAAATACAACTTCGACTTCGA
ACCAGACTTCTAGGCCTGTGCCGCAGTTTACAGGCAGGAGGATCATTTCG
TATGATGATTGA
back to top

Coding sequence (CDS) from alignment at OGUI01000010.1:1423707..1424368-

>ATCC64974_67370-T1 ID=ATCC64974_67370-T1|Name=ATCC64974_67370-T1|organism=Aspergillus niger N402|type=CDS|length=1182bp|location=Sequence derived from alignment at OGUI01000010.1:1423707..1424368- (Aspergillus niger N402)
GAAGACCTCCATGCTTTCCAAGCAAAACACTTCCCGGGAAGCATCATCGC
CCACCAGACACCACAACCGCAAGCAGTGACCAACACCAACCTCCCCGAAG
AATACACCTCACATGACTACGAAGAACAATACGACTGGAATGAAGAATAT
GAAGAAGAAGATGAAGATCTAGGCTACTACCCCGACGGCGTGAAACGCAC
ACTCACGGACGAACAAATCCGCATTTTCAGACATAGTGAGATCCATGCCT
TGAGGAGGGAGAAGGAGTTGCGTGAGGAGGAGGAGGCGGATGCTGCTGCT
TCCGCTGCTGCTGCTGAAGCTGAAGCGGCTGCAGAGCATGCGGTAGATGC
AGGTGCGGATGTAGGCGCAGATGCGAACGCAAAGACAGATGCTGCTGGTA
CGGAACAAGCGAGCAAGTCTCGGGTAGAAGGGGAAGATACAGATGTGAAG
ATGGATTATGGGGATGGGGGTGTTTCAAATACAACTTCGACTTCGAACCA
GACTTCTAGGCCTGTGCCGCAGTTTACAGGCAGGAGGATCATTTCGTATG
ATGATTGAATGTCCCTAATCACACCACCCCCCATCACCATCGAAGACCTC
CATGCTTTCCAAGCAAAACACTTCCCGGGAAGCATCATCGCCCACCAGAC
ACCACAACCGCAAGCAGTGACCAACACCAACCTCCCCGAAGAATACACCT
CACATGACTACGAAGAACAATACGACTGGAATGAAGAATATGAAGAAGAA
GATGAAGATCTAGGCTACTACCCCGACGGCGTGAAACGCACACTCACGGA
CGAACAAATCCGCATTTTCAGACATAGTGAGATCCATGCCTTGAGGAGGG
AGAAGGAGTTGCGTGAGGAGGAGGAGGCGGATGCTGCTGCTTCCGCTGCT
GCTGCTGAAGCTGAAGCGGCTGCAGAGCATGCGGTAGATGCAGGTGCGGA
TGTAGGCGCAGATGCGAACGCAAAGACAGATGCTGCTGGTACGGAACAAG
CGAGCAAGTCTCGGGTAGAAGGGGAAGATACAGATGTGAAGATGGATTAT
GGGGATGGGGGTGTTTCAAATACAACTTCGACTTCGAACCAGACTTCTAG
GCCTGTGCCGCAGTTTACAGGCAGGAGGATCATTTCGTATGATGATTGAA
TGTCCCTAATCACACCACCCCCCATCACCATC
back to top
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
ATCC64974_67370ATCC64974_67370Aspergillus niger N402gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
ATCC64974_67370-T1ATCC64974_67370-T1-proteinAspergillus niger N402polypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ATCC64974_67370-T1.cdsATCC64974_67370-T1.cdsAspergillus niger N402CDS


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ATCC64974_67370-T1.exon2ATCC64974_67370-T1.exon2Aspergillus niger N402exon
ATCC64974_67370-T1.exon1ATCC64974_67370-T1.exon1Aspergillus niger N402exon


Properties
Property NameValue
NoteEggNog:ENOG41
DBxrefInterPro:IPR024526
DBxrefPFAM:PF12720
Producthypothetical protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger N402 whole genome analysis2021-11-01
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
OGUI01000010.1supercontigOGUI01000010.1:1423707..1424368 -
Powered by Drupal