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ATCC64974_67540-T1, ATCC64974_67540-T1 (mRNA) Aspergillus niger N402

Overview
NameATCC64974_67540-T1
Unique NameATCC64974_67540-T1
TypemRNA
OrganismAspergillus niger N402
Sequences
The following sequences are available for this feature:

mRNA from alignment at OGUI01000010.1:1477295..1478002-

Legend: polypeptideCDSexon
Hold the cursor over a type above to highlight its positions in the sequence below.
>ATCC64974_67540-T1 ID=ATCC64974_67540-T1|Name=ATCC64974_67540-T1|organism=Aspergillus niger N402|type=mRNA|length=708bp|location=Sequence derived from alignment at OGUI01000010.1:1477295..1478002- (Aspergillus niger N402)
ATGTTTTTCCTTAAAGAAGAGGTCAAGGTCATCACCTTGCACCCGTCCTA
CTTCGGGCCCAACATGCGCGAGTATCTCATCAACCGGTTAAACGAGGAGG
AGGAAGGACGTTGTACGGGCGACCACTTCGTAATCTGTGTGATGGACATG
GTTGATATTGGCGAAGGACGGGTGCTCCCAGGCAGCGGACAGGCAGAATA
TACTATCAAGTATCGGGCAATCATCTGGAAGCCCTTCCGCGGAGAGACCG
TACGTCTTGGAGTTGCATTGAACAGGGCTGCATTTGATTCTGACCATAGC
CTTGTAGGTCGATGCGATTGTTACGTCTGTCAAGCCCACCGGTATATTTA
CTTTGGCCGGTCCATTGTCTGTTTTTATTGCACGGAAAGTATGTCAACGA
CCGAGTTTGAGTTGGATCACTTAGCCTTATCGGTTGCTAACGAGTTGGCA
AGAACATTCCTTCCGACATCAAGTGGGAACCAAACACAGTACCGCCGCAA
TACACGGACCATGCGGACCAAGTCATCGAGAAGGGGACCAGTTTACGGCT
TAAGATTCTTGGTGTGAAGCCCGACGTTGCGGCGATCAATGCCATTGGAA
CGATCAAGGAAGATTATCTCGGGTGAGTCTCCCAAACCTTTCTGGGAATT
GGTGTCCAACACAGATGTACTGACATTCTATTTTTCTTTCCTTTCCAGAC
CATTGTAA
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Coding sequence (CDS) from alignment at OGUI01000010.1:1477295..1478002-

>ATCC64974_67540-T1 ID=ATCC64974_67540-T1|Name=ATCC64974_67540-T1|organism=Aspergillus niger N402|type=CDS|length=2040bp|location=Sequence derived from alignment at OGUI01000010.1:1477295..1478002- (Aspergillus niger N402)
ACCATTGTAAAACATTCCTTCCGACATCAAGTGGGAACCAAACACAGTAC
CGCCGCAATACACGGACCATGCGGACCAAGTCATCGAGAAGGGGACCAGT
TTACGGCTTAAGATTCTTGGTGTGAAGCCCGACGTTGCGGCGATCAATGC
CATTGGAACGATCAAGGAAGATTATCTCGGGTCGATGCGATTGTTACGTC
TGTCAAGCCCACCGGTATATTTACTTTGGCCGGTCCATTGTCTGTTTTTA
TTGCACGGAAAATGTTTTTCCTTAAAGAAGAGGTCAAGGTCATCACCTTG
CACCCGTCCTACTTCGGGCCCAACATGCGCGAGTATCTCATCAACCGGTT
AAACGAGGAGGAGGAAGGACGTTGTACGGGCGACCACTTCGTAATCTGTG
TGATGGACATGGTTGATATTGGCGAAGGACGGGTGCTCCCAGGCAGCGGA
CAGGCAGAATATACTATCAAGTATCGGGCAATCATCTGGAAGCCCTTCCG
CGGAGAGACCACCATTGTAAAACATTCCTTCCGACATCAAGTGGGAACCA
AACACAGTACCGCCGCAATACACGGACCATGCGGACCAAGTCATCGAGAA
GGGGACCAGTTTACGGCTTAAGATTCTTGGTGTGAAGCCCGACGTTGCGG
CGATCAATGCCATTGGAACGATCAAGGAAGATTATCTCGGGTCGATGCGA
TTGTTACGTCTGTCAAGCCCACCGGTATATTTACTTTGGCCGGTCCATTG
TCTGTTTTTATTGCACGGAAAATGTTTTTCCTTAAAGAAGAGGTCAAGGT
CATCACCTTGCACCCGTCCTACTTCGGGCCCAACATGCGCGAGTATCTCA
TCAACCGGTTAAACGAGGAGGAGGAAGGACGTTGTACGGGCGACCACTTC
GTAATCTGTGTGATGGACATGGTTGATATTGGCGAAGGACGGGTGCTCCC
AGGCAGCGGACAGGCAGAATATACTATCAAGTATCGGGCAATCATCTGGA
AGCCCTTCCGCGGAGAGACCACCATTGTAAAACATTCCTTCCGACATCAA
GTGGGAACCAAACACAGTACCGCCGCAATACACGGACCATGCGGACCAAG
TCATCGAGAAGGGGACCAGTTTACGGCTTAAGATTCTTGGTGTGAAGCCC
GACGTTGCGGCGATCAATGCCATTGGAACGATCAAGGAAGATTATCTCGG
GTCGATGCGATTGTTACGTCTGTCAAGCCCACCGGTATATTTACTTTGGC
CGGTCCATTGTCTGTTTTTATTGCACGGAAAATGTTTTTCCTTAAAGAAG
AGGTCAAGGTCATCACCTTGCACCCGTCCTACTTCGGGCCCAACATGCGC
GAGTATCTCATCAACCGGTTAAACGAGGAGGAGGAAGGACGTTGTACGGG
CGACCACTTCGTAATCTGTGTGATGGACATGGTTGATATTGGCGAAGGAC
GGGTGCTCCCAGGCAGCGGACAGGCAGAATATACTATCAAGTATCGGGCA
ATCATCTGGAAGCCCTTCCGCGGAGAGACCACCATTGTAAAACATTCCTT
CCGACATCAAGTGGGAACCAAACACAGTACCGCCGCAATACACGGACCAT
GCGGACCAAGTCATCGAGAAGGGGACCAGTTTACGGCTTAAGATTCTTGG
TGTGAAGCCCGACGTTGCGGCGATCAATGCCATTGGAACGATCAAGGAAG
ATTATCTCGGGTCGATGCGATTGTTACGTCTGTCAAGCCCACCGGTATAT
TTACTTTGGCCGGTCCATTGTCTGTTTTTATTGCACGGAAAATGTTTTTC
CTTAAAGAAGAGGTCAAGGTCATCACCTTGCACCCGTCCTACTTCGGGCC
CAACATGCGCGAGTATCTCATCAACCGGTTAAACGAGGAGGAGGAAGGAC
GTTGTACGGGCGACCACTTCGTAATCTGTGTGATGGACATGGTTGATATT
GGCGAAGGACGGGTGCTCCCAGGCAGCGGACAGGCAGAATATACTATCAA
GTATCGGGCAATCATCTGGAAGCCCTTCCGCGGAGAGACC
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Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Molecular Function
TermDefinition
GO:0003676nucleic acid binding
GO:0003899DNA-directed 5'-3' RNA polymerase activity
Vocabulary: Biological Process
TermDefinition
GO:0006351transcription, DNA-templated
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
ATCC64974_67540ATCC64974_67540Aspergillus niger N402gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
ATCC64974_67540-T1ATCC64974_67540-T1-proteinAspergillus niger N402polypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ATCC64974_67540-T1.cdsATCC64974_67540-T1.cdsAspergillus niger N402CDS


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ATCC64974_67540-T1.exon4ATCC64974_67540-T1.exon4Aspergillus niger N402exon
ATCC64974_67540-T1.exon3ATCC64974_67540-T1.exon3Aspergillus niger N402exon
ATCC64974_67540-T1.exon2ATCC64974_67540-T1.exon2Aspergillus niger N402exon
ATCC64974_67540-T1.exon1ATCC64974_67540-T1.exon1Aspergillus niger N402exon


Properties
Property NameValue
NoteBUSCO:EOG09264RW6
DBxrefInterPro:IPR012340
DBxrefInterPro:IPR005576
DBxrefInterPro:IPR003029
DBxrefInterPro:IPR036898
DBxrefPFAM:PF03876
DBxrefPFAM:PF00575
Producthypothetical protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger N402 whole genome analysis2021-11-01
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
OGUI01000010.1supercontigOGUI01000010.1:1477295..1478002 -
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