You are here

Home

ATCC64974_67800-T1, ATCC64974_67800-T1 (mRNA) Aspergillus niger N402

Overview
NameATCC64974_67800-T1
Unique NameATCC64974_67800-T1
TypemRNA
OrganismAspergillus niger N402
Sequences
The following sequences are available for this feature:

mRNA from alignment at OGUI01000010.1:1568639..1569490+

Legend: exonpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>ATCC64974_67800-T1 ID=ATCC64974_67800-T1|Name=ATCC64974_67800-T1|organism=Aspergillus niger N402|type=mRNA|length=852bp|location=Sequence derived from alignment at OGUI01000010.1:1568639..1569490+ (Aspergillus niger N402)
ATGTCTCAATCAACCAACAACTTCATCTCCATCAACAAACTCACCAACAC
TCGCGTCCTCCTCATCGGCGGAACCTCAGGCATCGGCTTCGTCGTCGCCC
GCGCCGCCCTCGAACACGGCGCCAACATCATCCTCTCCAGCTCCAACCCG
GAGAGACTCGCCTCCGCTATATCCCGTCTGAAGACCCTCTACCCAGACCC
ATCCTTCACCTCCCGCATCACCGGCAAGGCATATGACCTAAGCGATGAAT
CTACCCTAGAGACCAATATCATCTCCTTACTCGACTACGCTACCTCTCCA
TCCATCTTCCCCAACACCACCACCAATACCGAAGGGAAAATCCTTCTAAA
CCACATATCCTACACCTCCGGCACACGCCCCTCCCGCGCCCCCATCACCC
CTACCTCCTCCCTCACGCCCCAAACCTATACATCCAGCCAAACCCTCCGC
GTCCTGGCCCCCCTCATGCTGGGCAAACATGCCAAGACCTACATGGTGGA
TTCGCATACCTCGTCGTTGACGTTCACGTCCGGCGTGTTGGCGAGTAAGC
CGGTGGTGGGGACGACGTTGAGTGCGATGGCGGGGAGTGCGCTGGGAGGG
CTGGTCAGGGGACTGGCGGTCGAGTTGGCGCCCATTAGGGCGAATGTTGT
GGCACCGGGGGCGGTGGAGACGGAGATTTTTGATGCTCTTGGGGGGCAGA
AGGACATGTATATGGAGATGTTTAGGAAGGGGACGGTCTTGGGGAGGGTT
GGAGCCCCGGAGGATGTGGCGGAGGCGTATTTGTGGTGTATGAAGGATGG
GTTTGTTACGGGGTTGTGGGTGGGGAGTGATGGGGGGGCTTTACTTAAGT
AG
back to top

Coding sequence (CDS) from alignment at OGUI01000010.1:1568639..1569490+

>ATCC64974_67800-T1 ID=ATCC64974_67800-T1|Name=ATCC64974_67800-T1|organism=Aspergillus niger N402|type=CDS|length=852bp|location=Sequence derived from alignment at OGUI01000010.1:1568639..1569490+ (Aspergillus niger N402)
ATGTCTCAATCAACCAACAACTTCATCTCCATCAACAAACTCACCAACAC
TCGCGTCCTCCTCATCGGCGGAACCTCAGGCATCGGCTTCGTCGTCGCCC
GCGCCGCCCTCGAACACGGCGCCAACATCATCCTCTCCAGCTCCAACCCG
GAGAGACTCGCCTCCGCTATATCCCGTCTGAAGACCCTCTACCCAGACCC
ATCCTTCACCTCCCGCATCACCGGCAAGGCATATGACCTAAGCGATGAAT
CTACCCTAGAGACCAATATCATCTCCTTACTCGACTACGCTACCTCTCCA
TCCATCTTCCCCAACACCACCACCAATACCGAAGGGAAAATCCTTCTAAA
CCACATATCCTACACCTCCGGCACACGCCCCTCCCGCGCCCCCATCACCC
CTACCTCCTCCCTCACGCCCCAAACCTATACATCCAGCCAAACCCTCCGC
GTCCTGGCCCCCCTCATGCTGGGCAAACATGCCAAGACCTACATGGTGGA
TTCGCATACCTCGTCGTTGACGTTCACGTCCGGCGTGTTGGCGAGTAAGC
CGGTGGTGGGGACGACGTTGAGTGCGATGGCGGGGAGTGCGCTGGGAGGG
CTGGTCAGGGGACTGGCGGTCGAGTTGGCGCCCATTAGGGCGAATGTTGT
GGCACCGGGGGCGGTGGAGACGGAGATTTTTGATGCTCTTGGGGGGCAGA
AGGACATGTATATGGAGATGTTTAGGAAGGGGACGGTCTTGGGGAGGGTT
GGAGCCCCGGAGGATGTGGCGGAGGCGTATTTGTGGTGTATGAAGGATGG
GTTTGTTACGGGGTTGTGGGTGGGGAGTGATGGGGGGGCTTTACTTAAGT
AG
back to top
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
ATCC64974_67800ATCC64974_67800Aspergillus niger N402gene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ATCC64974_67800-T1.exon1ATCC64974_67800-T1.exon1Aspergillus niger N402exon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ATCC64974_67800-T1.cdsATCC64974_67800-T1.cdsAspergillus niger N402CDS


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
ATCC64974_67800-T1ATCC64974_67800-T1-proteinAspergillus niger N402polypeptide


Properties
Property NameValue
NoteEggNog:ENOG41
DBxrefInterPro:IPR036291
DBxrefInterPro:IPR002347
DBxrefPFAM:PF13561
Producthypothetical protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger N402 whole genome analysis2021-11-01
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
OGUI01000010.1supercontigOGUI01000010.1:1568639..1569490 +
Powered by Drupal