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ATCC64974_67840-T1, ATCC64974_67840-T1 (mRNA) Aspergillus niger N402

Overview
NameATCC64974_67840-T1
Unique NameATCC64974_67840-T1
TypemRNA
OrganismAspergillus niger N402
Sequences
The following sequences are available for this feature:

mRNA from alignment at OGUI01000010.1:1584844..1586010-

Legend: polypeptideCDSexon
Hold the cursor over a type above to highlight its positions in the sequence below.
>ATCC64974_67840-T1 ID=ATCC64974_67840-T1|Name=ATCC64974_67840-T1|organism=Aspergillus niger N402|type=mRNA|length=1167bp|location=Sequence derived from alignment at OGUI01000010.1:1584844..1586010- (Aspergillus niger N402)
ATGCCTTCTGCCAAGCCTTTGTTCTGCCTTGCGACCCTGGCCGGTGCCGC
TCTGGCTGCTCCTGCGCCTTCCCGCGTCTCCGACTTCACCAAGCGGTCCA
CCTGCACCTTCACTGATGCGGCCACCGCCTCCGAGAGCAAGACCTCTTGC
TCCGACATCGTCCTCAAGGACATCACCGTCCCTGCCGGTGAGACCCTTAA
CCTGAAGGACCTCAACGACGGCACCACCGTAAGCGTCCCCTCCCAGCCCT
AGCAGCAGCCCCAATCCTAACAGGCATTCCAGGTCACCTTCGAGGGAACC
ACCACCTGGGAGTACGAGGAGTGGGATGGACCCCTTCTCCGTATCTCCGG
TAAGGACATCACCGTGACCCAGTCCTCCGACGCCGTCCTCGACGGCAACG
GCGCCAAGTGGTGGGACGGTGAGGGAACCAACGGCGGCAAGACCAAGCCC
AAGTTCTTCTACGCCCACGACCTCGACGACTCCAAGATCTCCGGTCTTTA
CATCAAAAACACCCCCGTCCAGGCCATCTCCGTCGAGTCGGACAACCTCG
TGATCGAGGACGTCACCATCGACAACAGCGACGGTGACTCCGAGGGCGGT
CACAACACCGACGGTTTCGACATCAGCGAGAGTACCTACATCACCATCAC
CGGCGCCACCGTCAAGAACCAGGACGACTGCGTCGCCATCAACTCTGGTG
AGAACATCTACTTCTCCGGCGGTACCTGCTCTGGCGGTCACGGTCTCTCC
ATCGGCTCCGTCGGTGGCCGCGATGACAACACCGTCAAGAACGTCACTTT
CATCGACTCGACTGTCTCCGACTCTGAGAACGGTGTTCGCATCAAGACCG
TCTACGACGCTACCGGTACTGTCGAGGACATCACCTACTCCAACATCCAG
CTCTCCGGTATCTCCGACTACGGTATCGTCATTGAGCAGGACTACGAGAA
CGGTGACCCCACTGGTACTCCCTCCAACGGTGTTACCATCTCCGACGTCA
CCCTCGAGGACATCACTGGCTCGGTTGACTCCGACGCTGTCGAGATCTAC
ATCCTTTGCGGTGATGGCAGCTGCTCTGACTGGACCATGTCTGGCATTGA
CATCACCGGCGGTGAGACCAGCAGCGATTGCGAGAACGTTCCCTCTGGTG
CTTCTTGCGATCAGTAA
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Coding sequence (CDS) from alignment at OGUI01000010.1:1584844..1586010-

>ATCC64974_67840-T1 ID=ATCC64974_67840-T1|Name=ATCC64974_67840-T1|organism=Aspergillus niger N402|type=CDS|length=2226bp|location=Sequence derived from alignment at OGUI01000010.1:1584844..1586010- (Aspergillus niger N402)
GTCACCTTCGAGGGAACCACCACCTGGGAGTACGAGGAGTGGGATGGACC
CCTTCTCCGTATCTCCGGTAAGGACATCACCGTGACCCAGTCCTCCGACG
CCGTCCTCGACGGCAACGGCGCCAAGTGGTGGGACGGTGAGGGAACCAAC
GGCGGCAAGACCAAGCCCAAGTTCTTCTACGCCCACGACCTCGACGACTC
CAAGATCTCCGGTCTTTACATCAAAAACACCCCCGTCCAGGCCATCTCCG
TCGAGTCGGACAACCTCGTGATCGAGGACGTCACCATCGACAACAGCGAC
GGTGACTCCGAGGGCGGTCACAACACCGACGGTTTCGACATCAGCGAGAG
TACCTACATCACCATCACCGGCGCCACCGTCAAGAACCAGGACGACTGCG
TCGCCATCAACTCTGGTGAGAACATCTACTTCTCCGGCGGTACCTGCTCT
GGCGGTCACGGTCTCTCCATCGGCTCCGTCGGTGGCCGCGATGACAACAC
CGTCAAGAACGTCACTTTCATCGACTCGACTGTCTCCGACTCTGAGAACG
GTGTTCGCATCAAGACCGTCTACGACGCTACCGGTACTGTCGAGGACATC
ACCTACTCCAACATCCAGCTCTCCGGTATCTCCGACTACGGTATCGTCAT
TGAGCAGGACTACGAGAACGGTGACCCCACTGGTACTCCCTCCAACGGTG
TTACCATCTCCGACGTCACCCTCGAGGACATCACTGGCTCGGTTGACTCC
GACGCTGTCGAGATCTACATCCTTTGCGGTGATGGCAGCTGCTCTGACTG
GACCATGTCTGGCATTGACATCACCGGCGGTGAGACCAGCAGCGATTGCG
AGAACGTTCCCTCTGGTGCTTCTTGCGATCAGTAAATGCCTTCTGCCAAG
CCTTTGTTCTGCCTTGCGACCCTGGCCGGTGCCGCTCTGGCTGCTCCTGC
GCCTTCCCGCGTCTCCGACTTCACCAAGCGGTCCACCTGCACCTTCACTG
ATGCGGCCACCGCCTCCGAGAGCAAGACCTCTTGCTCCGACATCGTCCTC
AAGGACATCACCGTCCCTGCCGGTGAGACCCTTAACCTGAAGGACCTCAA
CGACGGCACCACCGTCACCTTCGAGGGAACCACCACCTGGGAGTACGAGG
AGTGGGATGGACCCCTTCTCCGTATCTCCGGTAAGGACATCACCGTGACC
CAGTCCTCCGACGCCGTCCTCGACGGCAACGGCGCCAAGTGGTGGGACGG
TGAGGGAACCAACGGCGGCAAGACCAAGCCCAAGTTCTTCTACGCCCACG
ACCTCGACGACTCCAAGATCTCCGGTCTTTACATCAAAAACACCCCCGTC
CAGGCCATCTCCGTCGAGTCGGACAACCTCGTGATCGAGGACGTCACCAT
CGACAACAGCGACGGTGACTCCGAGGGCGGTCACAACACCGACGGTTTCG
ACATCAGCGAGAGTACCTACATCACCATCACCGGCGCCACCGTCAAGAAC
CAGGACGACTGCGTCGCCATCAACTCTGGTGAGAACATCTACTTCTCCGG
CGGTACCTGCTCTGGCGGTCACGGTCTCTCCATCGGCTCCGTCGGTGGCC
GCGATGACAACACCGTCAAGAACGTCACTTTCATCGACTCGACTGTCTCC
GACTCTGAGAACGGTGTTCGCATCAAGACCGTCTACGACGCTACCGGTAC
TGTCGAGGACATCACCTACTCCAACATCCAGCTCTCCGGTATCTCCGACT
ACGGTATCGTCATTGAGCAGGACTACGAGAACGGTGACCCCACTGGTACT
CCCTCCAACGGTGTTACCATCTCCGACGTCACCCTCGAGGACATCACTGG
CTCGGTTGACTCCGACGCTGTCGAGATCTACATCCTTTGCGGTGATGGCA
GCTGCTCTGACTGGACCATGTCTGGCATTGACATCACCGGCGGTGAGACC
AGCAGCGATTGCGAGAACGTTCCCTCTGGTGCTTCTTGCGATCAGTAAAT
GCCTTCTGCCAAGCCTTTGTTCTGCCTTGCGACCCTGGCCGGTGCCGCTC
TGGCTGCTCCTGCGCCTTCCCGCGTCTCCGACTTCACCAAGCGGTCCACC
TGCACCTTCACTGATGCGGCCACCGCCTCCGAGAGCAAGACCTCTTGCTC
CGACATCGTCCTCAAGGACATCACCGTCCCTGCCGGTGAGACCCTTAACC
TGAAGGACCTCAACGACGGCACCACC
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Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Molecular Function
TermDefinition
GO:0004650polygalacturonase activity
Vocabulary: Biological Process
TermDefinition
GO:0005975carbohydrate metabolic process
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
ATCC64974_67840ATCC64974_67840Aspergillus niger N402gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
ATCC64974_67840-T1ATCC64974_67840-T1-proteinAspergillus niger N402polypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ATCC64974_67840-T1.cdsATCC64974_67840-T1.cdsAspergillus niger N402CDS


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ATCC64974_67840-T1.exon2ATCC64974_67840-T1.exon2Aspergillus niger N402exon
ATCC64974_67840-T1.exon1ATCC64974_67840-T1.exon1Aspergillus niger N402exon


Properties
Property NameValue
NoteSECRETED:SignalP(1-19)
NoteCAZy:GH28
DBxrefInterPro:IPR011050
DBxrefInterPro:IPR000743
DBxrefInterPro:IPR012334
DBxrefInterPro:IPR006626
DBxrefPFAM:PF00295
Producthypothetical protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger N402 whole genome analysis2021-11-01
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
OGUI01000010.1supercontigOGUI01000010.1:1584844..1586010 -
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