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ATCC64974_6800-T1, ATCC64974_6800-T1 (mRNA) Aspergillus niger N402

Overview
NameATCC64974_6800-T1
Unique NameATCC64974_6800-T1
TypemRNA
OrganismAspergillus niger N402
Sequences
The following sequences are available for this feature:

mRNA from alignment at OGUI01000001.1:2042269..2043394+

Legend: exonpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>ATCC64974_6800-T1 ID=ATCC64974_6800-T1|Name=ATCC64974_6800-T1|organism=Aspergillus niger N402|type=mRNA|length=1126bp|location=Sequence derived from alignment at OGUI01000001.1:2042269..2043394+ (Aspergillus niger N402)
ATGTATCAACTCCTATCAGTTGCCTCGGTTCCTCTGCTGGCCAGCCTCGT
GCATGGCTATGCTGACCCCGGAGCATGCTCGGGTGTTTGTACCACCCATG
ACCCCGGTTTGATCCGGAGAGAGTCGGACGGTACATACTTCCTCTTCTCT
ACAGGAAACAAAATCTCCTACGTCTCTGCATCATCCATCGAAGGACCATG
GACCAGCGTTGGGTCTATGCTGCCGGATGGATCGTCCATCGACCTCGATG
GCAACGATGATCTTTGGGTAACTATGTCCCACTGCAAACATGATTGGCCT
GTCTGACACTAGCCCAGGCCCCGGATGTCTCCTATGTAGATGGTCTCTAT
TATGTATACTACGCTGTGTCGACCTTTGGATCCCAAGATTCCGCCATCGG
ACTTGCAACGTCCGAGACGATGGAATATGGCTCTTGGACGGATCATGGCT
CCACTGGCATTGCGTCTTCCTCAGCCAAGATTTATAATGCGATCGACCCC
AACCTGATCTACGCCGATGGCACCTACTACATCAACTTTGGGTCGTTCTG
GGATGACATTTACCAAGTCCCGATGAAGTCGACCCCAACGGCAGCTGCCT
CTTCCTCCTACAATCTTGCGTATGACCCGTCGGGTACCCATGCGGAGGAG
GGTTCCTATATGTTTCAGTACGGTGACTACTACTACCTCTTTTACTCGGC
AGGTATCTGCTGTGGATACGATACATCCATGCCCGCTTCCGGAGAGGAGT
ATCATATCAAGGTCTGCCGTTCGACTTCGCCCACGGGTGATTTCGTAAGT
ATATCCGACATTTAGAGAAAATACTAAGTAGGGAAAGCTAACCTGGTGCT
AAGGTTGACTCCGACGGTACGGCGTGCACGGATGGCGGGGGCACGATGGT
GCTCGAAAGCCATGGAGAAGTCTATGGCCCTGGCGGACAGTAAGTGATTC
TGCAGCTGCCCCACCGATATTTATGCTTATCATGTTTTAGGGGTGTGTAT
GACGATCCCAACCTTGGTCCGGTTCTTTACTACCACTACATGAACACCAC
GATTGGATACGCGGATTCTGACGCGCAGTTTGGGTGGAACACGATCGACT
TCTCTAGCGGATGGCCGGTTGTATAA
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Coding sequence (CDS) from alignment at OGUI01000001.1:2042269..2043394+

>ATCC64974_6800-T1 ID=ATCC64974_6800-T1|Name=ATCC64974_6800-T1|organism=Aspergillus niger N402|type=CDS|length=3864bp|location=Sequence derived from alignment at OGUI01000001.1:2042269..2043394+ (Aspergillus niger N402)
ATGTATCAACTCCTATCAGTTGCCTCGGTTCCTCTGCTGGCCAGCCTCGT
GCATGGCTATGCTGACCCCGGAGCATGCTCGGGTGTTTGTACCACCCATG
ACCCCGGTTTGATCCGGAGAGAGTCGGACGGTACATACTTCCTCTTCTCT
ACAGGAAACAAAATCTCCTACGTCTCTGCATCATCCATCGAAGGACCATG
GACCAGCGTTGGGTCTATGCTGCCGGATGGATCGTCCATCGACCTCGATG
GCAACGATGATCTTTGGGCCCCGGATGTCTCCTATGTAGATGGTCTCTAT
TATGTATACTACGCTGTGTCGACCTTTGGATCCCAAGATTCCGCCATCGG
ACTTGCAACGTCCGAGACGATGGAATATGGCTCTTGGACGGATCATGGCT
CCACTGGCATTGCGTCTTCCTCAGCCAAGATTTATAATGCGATCGACCCC
AACCTGATCTACGCCGATGGCACCTACTACATCAACTTTGGGTCGTTCTG
GGATGACATTTACCAAGTCCCGATGAAGTCGACCCCAACGGCAGCTGCCT
CTTCCTCCTACAATCTTGCGTATGACCCGTCGGGTACCCATGCGGAGGAG
GGTTCCTATATGTTTCAGTACGGTGACTACTACTACCTCTTTTACTCGGC
AGGTATCTGCTGTGGATACGATACATCCATGCCCGCTTCCGGAGAGGAGT
ATCATATCAAGGTCTGCCGTTCGACTTCGCCCACGGGTGATTTCGTTGAC
TCCGACGGTACGGCGTGCACGGATGGCGGGGGCACGATGGTGCTCGAAAG
CCATGGAGAAGTCTATGGCCCTGGCGGACAGGGTGTGTATGACGATCCCA
ACCTTGGTCCGGTTCTTTACTACCACTACATGAACACCACGATTGGATAC
GCGGATTCTGACGCGCAGTTTGGGTGGAACACGATCGACTTCTCTAGCGG
ATGGCCGGTTGTATAAATGTATCAACTCCTATCAGTTGCCTCGGTTCCTC
TGCTGGCCAGCCTCGTGCATGGCTATGCTGACCCCGGAGCATGCTCGGGT
GTTTGTACCACCCATGACCCCGGTTTGATCCGGAGAGAGTCGGACGGTAC
ATACTTCCTCTTCTCTACAGGAAACAAAATCTCCTACGTCTCTGCATCAT
CCATCGAAGGACCATGGACCAGCGTTGGGTCTATGCTGCCGGATGGATCG
TCCATCGACCTCGATGGCAACGATGATCTTTGGGCCCCGGATGTCTCCTA
TGTAGATGGTCTCTATTATGTATACTACGCTGTGTCGACCTTTGGATCCC
AAGATTCCGCCATCGGACTTGCAACGTCCGAGACGATGGAATATGGCTCT
TGGACGGATCATGGCTCCACTGGCATTGCGTCTTCCTCAGCCAAGATTTA
TAATGCGATCGACCCCAACCTGATCTACGCCGATGGCACCTACTACATCA
ACTTTGGGTCGTTCTGGGATGACATTTACCAAGTCCCGATGAAGTCGACC
CCAACGGCAGCTGCCTCTTCCTCCTACAATCTTGCGTATGACCCGTCGGG
TACCCATGCGGAGGAGGGTTCCTATATGTTTCAGTACGGTGACTACTACT
ACCTCTTTTACTCGGCAGGTATCTGCTGTGGATACGATACATCCATGCCC
GCTTCCGGAGAGGAGTATCATATCAAGGTCTGCCGTTCGACTTCGCCCAC
GGGTGATTTCGTTGACTCCGACGGTACGGCGTGCACGGATGGCGGGGGCA
CGATGGTGCTCGAAAGCCATGGAGAAGTCTATGGCCCTGGCGGACAGGGT
GTGTATGACGATCCCAACCTTGGTCCGGTTCTTTACTACCACTACATGAA
CACCACGATTGGATACGCGGATTCTGACGCGCAGTTTGGGTGGAACACGA
TCGACTTCTCTAGCGGATGGCCGGTTGTATAAATGTATCAACTCCTATCA
GTTGCCTCGGTTCCTCTGCTGGCCAGCCTCGTGCATGGCTATGCTGACCC
CGGAGCATGCTCGGGTGTTTGTACCACCCATGACCCCGGTTTGATCCGGA
GAGAGTCGGACGGTACATACTTCCTCTTCTCTACAGGAAACAAAATCTCC
TACGTCTCTGCATCATCCATCGAAGGACCATGGACCAGCGTTGGGTCTAT
GCTGCCGGATGGATCGTCCATCGACCTCGATGGCAACGATGATCTTTGGG
CCCCGGATGTCTCCTATGTAGATGGTCTCTATTATGTATACTACGCTGTG
TCGACCTTTGGATCCCAAGATTCCGCCATCGGACTTGCAACGTCCGAGAC
GATGGAATATGGCTCTTGGACGGATCATGGCTCCACTGGCATTGCGTCTT
CCTCAGCCAAGATTTATAATGCGATCGACCCCAACCTGATCTACGCCGAT
GGCACCTACTACATCAACTTTGGGTCGTTCTGGGATGACATTTACCAAGT
CCCGATGAAGTCGACCCCAACGGCAGCTGCCTCTTCCTCCTACAATCTTG
CGTATGACCCGTCGGGTACCCATGCGGAGGAGGGTTCCTATATGTTTCAG
TACGGTGACTACTACTACCTCTTTTACTCGGCAGGTATCTGCTGTGGATA
CGATACATCCATGCCCGCTTCCGGAGAGGAGTATCATATCAAGGTCTGCC
GTTCGACTTCGCCCACGGGTGATTTCGTTGACTCCGACGGTACGGCGTGC
ACGGATGGCGGGGGCACGATGGTGCTCGAAAGCCATGGAGAAGTCTATGG
CCCTGGCGGACAGGGTGTGTATGACGATCCCAACCTTGGTCCGGTTCTTT
ACTACCACTACATGAACACCACGATTGGATACGCGGATTCTGACGCGCAG
TTTGGGTGGAACACGATCGACTTCTCTAGCGGATGGCCGGTTGTATAAAT
GTATCAACTCCTATCAGTTGCCTCGGTTCCTCTGCTGGCCAGCCTCGTGC
ATGGCTATGCTGACCCCGGAGCATGCTCGGGTGTTTGTACCACCCATGAC
CCCGGTTTGATCCGGAGAGAGTCGGACGGTACATACTTCCTCTTCTCTAC
AGGAAACAAAATCTCCTACGTCTCTGCATCATCCATCGAAGGACCATGGA
CCAGCGTTGGGTCTATGCTGCCGGATGGATCGTCCATCGACCTCGATGGC
AACGATGATCTTTGGGCCCCGGATGTCTCCTATGTAGATGGTCTCTATTA
TGTATACTACGCTGTGTCGACCTTTGGATCCCAAGATTCCGCCATCGGAC
TTGCAACGTCCGAGACGATGGAATATGGCTCTTGGACGGATCATGGCTCC
ACTGGCATTGCGTCTTCCTCAGCCAAGATTTATAATGCGATCGACCCCAA
CCTGATCTACGCCGATGGCACCTACTACATCAACTTTGGGTCGTTCTGGG
ATGACATTTACCAAGTCCCGATGAAGTCGACCCCAACGGCAGCTGCCTCT
TCCTCCTACAATCTTGCGTATGACCCGTCGGGTACCCATGCGGAGGAGGG
TTCCTATATGTTTCAGTACGGTGACTACTACTACCTCTTTTACTCGGCAG
GTATCTGCTGTGGATACGATACATCCATGCCCGCTTCCGGAGAGGAGTAT
CATATCAAGGTCTGCCGTTCGACTTCGCCCACGGGTGATTTCGTTGACTC
CGACGGTACGGCGTGCACGGATGGCGGGGGCACGATGGTGCTCGAAAGCC
ATGGAGAAGTCTATGGCCCTGGCGGACAGGGTGTGTATGACGATCCCAAC
CTTGGTCCGGTTCTTTACTACCACTACATGAACACCACGATTGGATACGC
GGATTCTGACGCGCAGTTTGGGTGGAACACGATCGACTTCTCTAGCGGAT
GGCCGGTTGTATAA
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Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Biological Process
TermDefinition
GO:0005975carbohydrate metabolic process
Vocabulary: Molecular Function
TermDefinition
GO:0004553hydrolase activity, hydrolyzing O-glycosyl compounds
GO:0046558arabinan endo-1,5-alpha-L-arabinosidase activity
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
ATCC64974_6800ATCC64974_6800Aspergillus niger N402gene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ATCC64974_6800-T1.exon1ATCC64974_6800-T1.exon1Aspergillus niger N402exon
ATCC64974_6800-T1.exon2ATCC64974_6800-T1.exon2Aspergillus niger N402exon
ATCC64974_6800-T1.exon3ATCC64974_6800-T1.exon3Aspergillus niger N402exon
ATCC64974_6800-T1.exon4ATCC64974_6800-T1.exon4Aspergillus niger N402exon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ATCC64974_6800-T1.cdsATCC64974_6800-T1.cdsAspergillus niger N402CDS


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
ATCC64974_6800-T1ATCC64974_6800-T1-proteinAspergillus niger N402polypeptide


Properties
Property NameValue
NoteSECRETED:SignalP(1-19)
NoteCAZy:GH43_8
NoteCAZy:GH43_30
NoteCAZy:GH43_7
NoteCAZy:GH43_4
NoteCAZy:GH43_3
NoteCAZy:GH43
NoteCAZy:GH43_5
NoteCAZy:GH43_6
DBxrefInterPro:IPR006710
DBxrefInterPro:IPR016840
DBxrefInterPro:IPR023296
DBxrefPFAM:PF04616
Producthypothetical protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger N402 whole genome analysis2021-11-01
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
OGUI01000001.1supercontigOGUI01000001.1:2042269..2043394 +
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