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ATCC64974_68250-T1, ATCC64974_68250-T1 (mRNA) Aspergillus niger N402

Overview
NameATCC64974_68250-T1
Unique NameATCC64974_68250-T1
TypemRNA
OrganismAspergillus niger N402
Sequences
The following sequences are available for this feature:

mRNA from alignment at OGUI01000010.1:1753592..1754481+

Legend: exonpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>ATCC64974_68250-T1 ID=ATCC64974_68250-T1|Name=ATCC64974_68250-T1|organism=Aspergillus niger N402|type=mRNA|length=890bp|location=Sequence derived from alignment at OGUI01000010.1:1753592..1754481+ (Aspergillus niger N402)
ATGTCCCTCCCACGTTTAACGCGCTCCCTGCGCGGGCCCCAGCTCAGCAA
AACCCTTCGCCACTCCCTCACCACCACAATCCGCTACCAATCCACCACTA
CCAACAACACCAAACCCGCCACCTCTACCTCCACAACATCAACATCAACA
CCACCCAAGCCCACCACTACCTCCTCTTCATCCTCCTCAACCTCCACCCC
CAAAACCAAAACCACCCCCACCCTCAAAGACCTCCTCGACACCCCACCAT
CCCCAGCAAACCCAACAGAAGACCGTATCGACTGGACGCGCTCCTTCCAC
GGGCTCAGCGCGACGCCCTTCCCCAAAGAATGCGCCGACATCCTCCTCGC
CCCGACCGACCCGGAAGAAGTCGAGATCAAGCCCGACGGCATCCTCTACC
TCCCCGAGATCAAGTACCGACGGATACTGAATAAGGCGTTCGGACCCGGT
GGATGGGGTCTGGTGCCTCGGAGTGAGAGCATTGTTACGCCCAAGATGGT
GACGAGGGAGTATGCGCTTGTTTGTAATGGGCGGTTAGTATTTCCCTATT
TCTCTTGGGGTGTGTGAGGGTGTGAGGTGTGTGGATGAATCAAGCTGACT
ACTTGTGTGTTGCGTCTAGGTTGGTTTCAGTTGCGCGCGGCGAACAGGAT
TACTTCTCTCCCGATGGAATCCCGACTGCTACGGAGGGATGTCGGTCGAA
TGCATTGGTGCGGTGTTGTAAGGATCTGGGGATTGCGAGCGAATTGTGGG
ATCCCAGGTGGATTCGGAAGTTCAAGGCGCAGTATACGCGGGAGGCGTTT
GTGGAGCACGTGGTGAATAAACGGAAGACGAAGATTTGGGTGAGGAAGGA
TGATACGGTTGGGTATCCGTGGAAGGAGACGAAGTTTTAG
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Coding sequence (CDS) from alignment at OGUI01000010.1:1753592..1754481+

>ATCC64974_68250-T1 ID=ATCC64974_68250-T1|Name=ATCC64974_68250-T1|organism=Aspergillus niger N402|type=CDS|length=1608bp|location=Sequence derived from alignment at OGUI01000010.1:1753592..1754481+ (Aspergillus niger N402)
ATGTCCCTCCCACGTTTAACGCGCTCCCTGCGCGGGCCCCAGCTCAGCAA
AACCCTTCGCCACTCCCTCACCACCACAATCCGCTACCAATCCACCACTA
CCAACAACACCAAACCCGCCACCTCTACCTCCACAACATCAACATCAACA
CCACCCAAGCCCACCACTACCTCCTCTTCATCCTCCTCAACCTCCACCCC
CAAAACCAAAACCACCCCCACCCTCAAAGACCTCCTCGACACCCCACCAT
CCCCAGCAAACCCAACAGAAGACCGTATCGACTGGACGCGCTCCTTCCAC
GGGCTCAGCGCGACGCCCTTCCCCAAAGAATGCGCCGACATCCTCCTCGC
CCCGACCGACCCGGAAGAAGTCGAGATCAAGCCCGACGGCATCCTCTACC
TCCCCGAGATCAAGTACCGACGGATACTGAATAAGGCGTTCGGACCCGGT
GGATGGGGTCTGGTGCCTCGGAGTGAGAGCATTGTTACGCCCAAGATGGT
GACGAGGGAGTATGCGCTTGTTTGTAATGGGCGGTTGGTTTCAGTTGCGC
GCGGCGAACAGGATTACTTCTCTCCCGATGGAATCCCGACTGCTACGGAG
GGATGTCGGTCGAATGCATTGGTGCGGTGTTGTAAGGATCTGGGGATTGC
GAGCGAATTGTGGGATCCCAGGTGGATTCGGAAGTTCAAGGCGCAGTATA
CGCGGGAGGCGTTTGTGGAGCACGTGGTGAATAAACGGAAGACGAAGATT
TGGGTGAGGAAGGATGATACGGTTGGGTATCCGTGGAAGGAGACGAAGTT
TTAGATGTCCCTCCCACGTTTAACGCGCTCCCTGCGCGGGCCCCAGCTCA
GCAAAACCCTTCGCCACTCCCTCACCACCACAATCCGCTACCAATCCACC
ACTACCAACAACACCAAACCCGCCACCTCTACCTCCACAACATCAACATC
AACACCACCCAAGCCCACCACTACCTCCTCTTCATCCTCCTCAACCTCCA
CCCCCAAAACCAAAACCACCCCCACCCTCAAAGACCTCCTCGACACCCCA
CCATCCCCAGCAAACCCAACAGAAGACCGTATCGACTGGACGCGCTCCTT
CCACGGGCTCAGCGCGACGCCCTTCCCCAAAGAATGCGCCGACATCCTCC
TCGCCCCGACCGACCCGGAAGAAGTCGAGATCAAGCCCGACGGCATCCTC
TACCTCCCCGAGATCAAGTACCGACGGATACTGAATAAGGCGTTCGGACC
CGGTGGATGGGGTCTGGTGCCTCGGAGTGAGAGCATTGTTACGCCCAAGA
TGGTGACGAGGGAGTATGCGCTTGTTTGTAATGGGCGGTTGGTTTCAGTT
GCGCGCGGCGAACAGGATTACTTCTCTCCCGATGGAATCCCGACTGCTAC
GGAGGGATGTCGGTCGAATGCATTGGTGCGGTGTTGTAAGGATCTGGGGA
TTGCGAGCGAATTGTGGGATCCCAGGTGGATTCGGAAGTTCAAGGCGCAG
TATACGCGGGAGGCGTTTGTGGAGCACGTGGTGAATAAACGGAAGACGAA
GATTTGGGTGAGGAAGGATGATACGGTTGGGTATCCGTGGAAGGAGACGA
AGTTTTAG
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Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Cellular Component
TermDefinition
GO:0000262mitochondrial chromosome
Vocabulary: Molecular Function
TermDefinition
GO:0003697single-stranded DNA binding
Vocabulary: Biological Process
TermDefinition
GO:0000002mitochondrial genome maintenance
GO:0006281DNA repair
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
ATCC64974_68250ATCC64974_68250Aspergillus niger N402gene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ATCC64974_68250-T1.exon1ATCC64974_68250-T1.exon1Aspergillus niger N402exon
ATCC64974_68250-T1.exon2ATCC64974_68250-T1.exon2Aspergillus niger N402exon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ATCC64974_68250-T1.cdsATCC64974_68250-T1.cdsAspergillus niger N402CDS


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
ATCC64974_68250-T1ATCC64974_68250-T1-proteinAspergillus niger N402polypeptide


Properties
Property NameValue
NoteEggNog:ENOG41
NoteBUSCO:EOG0926484N
DBxrefInterPro:IPR009446
DBxrefPFAM:PF06420
Producthypothetical protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger N402 whole genome analysis2021-11-01
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
OGUI01000010.1supercontigOGUI01000010.1:1753592..1754481 +
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