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ATCC64974_68890-T1, ATCC64974_68890-T1 (mRNA) Aspergillus niger N402

Overview
NameATCC64974_68890-T1
Unique NameATCC64974_68890-T1
TypemRNA
OrganismAspergillus niger N402
Sequences
The following sequences are available for this feature:

mRNA from alignment at OGUI01000010.1:1947677..1949222+

Legend: exonpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>ATCC64974_68890-T1 ID=ATCC64974_68890-T1|Name=ATCC64974_68890-T1|organism=Aspergillus niger N402|type=mRNA|length=1546bp|location=Sequence derived from alignment at OGUI01000010.1:1947677..1949222+ (Aspergillus niger N402)
ATGGTCAAGATCACAAGTTTCACCACGAGGGACGTGAGGTTTCCCGTAAG
TCGCGCACCTATCCTCTCAAGTTCACCCATGTATTTTGCATACCTGCTCA
CCAAATGACAGACCTCCCTCGATAAAACCGGCTCAGATGCCATGAACGCT
GCAGGCGACTACTCCTCCGCCTACTGCATCATCTACACTGACTCCGACTA
CACCGGCCACGGCATGGTACGCACATGACCAACCCTACCTCCACCTTCTC
AGAAACATTCACTAACAATCCTAGACCTTCACCATCGGCCGCGGCAATGA
AATCGTCTGCTCCGCCATCTCCCTCCTCGCTCCCCTCGTGGTCGGCAAAG
ACCTCGACGAACTTACCGCCGACTGGGGCAAGACCTGGCGCTACCTCGTC
TCCGACAGCCAACTGCGCTGGATCGGACCCGAGAAGGGTGTCATCCACCT
GGCCCTTGGTGCCGTCGTCAACGCTCTCTGGGATCTCTGGGCCAAGACCC
TGAACAAACCTGTCTGGCGCATTGTCGCGGACATGACCCCCGAGGAGTTT
GTTCGCTGCATTGACTTCCGCTACATCACGGACGCCATTACACCCGAGGA
GGCAATTGCCCTCCTCAAGGAGGTCGAGGCCGGCAAGCAGGACCGTATCA
AGGAAGCAGAGCAGAGCCAGGCTGTACCGGCCTATACTACCAGTGCGGGT
TGGCTGGGATACAGTGAGGAAAAGCTGAAAGTCCTTCTCAAGGAGAGCGT
CGAGCAGGGATACAAGCACTTTAAGCTGAAGGTTGGCGGAAACGTCGAGG
AAGACCGGAGGAGATTGGCTATTGCTCGTGAAGCTATTGGTTATGACAAG
GGCAACATTCTTATGGTTGATGCCAACCAGGTACCTACCTCCCCACTTCC
ATCCCTACCACCCACAATGCTAACACCTCATGTGAAAAAACAGGTCTGGT
CCGTCCCCGAAGCCATCACCTGGATGCAACAACTCGCCGAATTCAAGCCT
TGGTTCATCGAAGAGCCCACCTCCCCCGACGACATCCTCGGCCACGCCGC
CATCAAGAAGGCCCTCCAAGACACCCCCTACGGCCCCATCGGCGTCGCCA
CTGGCGAAATGTGCCAGAACCGCGTTGTCTTCAAGCAGCTCCTGCAGGCA
GGAGCCCTGACCGTCCTGCAAGCCGATGCCTGCCGTGTCGGCGGTGTCAA
TGAAGTTCTGGCCATCTTGCTGCTTGCGCGCAAGTTCGGCGTGCCGATCG
TGCCTCACTCCGGTGGTGTCGGGTTGCCTGAGTACACTCAGCATCTGAGC
ACGATCGACTACGTGGTGGTCAGTGGAAAGAAGAGTGTGTTGGAGTATGT
GGATCACTTGCACGAGCACTTCGTGCACCCGTCTAGTGTCAAGGATGGAT
ACTATGTTACTCCGATGGAGCCGGGGTATAGTGTTGAGATGAAGGCGGAG
AGCATGGATGCGTTTTCGTTCCCTGGTGAGGAGGGCAAGAGTTGGTGGAG
GTCGGAGGAGGCGAAGACCATTCTGGAGGGGCCCCGGATAGTATAG
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Coding sequence (CDS) from alignment at OGUI01000010.1:1947677..1949222+

>ATCC64974_68890-T1 ID=ATCC64974_68890-T1|Name=ATCC64974_68890-T1|organism=Aspergillus niger N402|type=CDS|length=5436bp|location=Sequence derived from alignment at OGUI01000010.1:1947677..1949222+ (Aspergillus niger N402)
ATGGTCAAGATCACAAGTTTCACCACGAGGGACGTGAGGTTTCCCACCTC
CCTCGATAAAACCGGCTCAGATGCCATGAACGCTGCAGGCGACTACTCCT
CCGCCTACTGCATCATCTACACTGACTCCGACTACACCGGCCACGGCATG
ACCTTCACCATCGGCCGCGGCAATGAAATCGTCTGCTCCGCCATCTCCCT
CCTCGCTCCCCTCGTGGTCGGCAAAGACCTCGACGAACTTACCGCCGACT
GGGGCAAGACCTGGCGCTACCTCGTCTCCGACAGCCAACTGCGCTGGATC
GGACCCGAGAAGGGTGTCATCCACCTGGCCCTTGGTGCCGTCGTCAACGC
TCTCTGGGATCTCTGGGCCAAGACCCTGAACAAACCTGTCTGGCGCATTG
TCGCGGACATGACCCCCGAGGAGTTTGTTCGCTGCATTGACTTCCGCTAC
ATCACGGACGCCATTACACCCGAGGAGGCAATTGCCCTCCTCAAGGAGGT
CGAGGCCGGCAAGCAGGACCGTATCAAGGAAGCAGAGCAGAGCCAGGCTG
TACCGGCCTATACTACCAGTGCGGGTTGGCTGGGATACAGTGAGGAAAAG
CTGAAAGTCCTTCTCAAGGAGAGCGTCGAGCAGGGATACAAGCACTTTAA
GCTGAAGGTTGGCGGAAACGTCGAGGAAGACCGGAGGAGATTGGCTATTG
CTCGTGAAGCTATTGGTTATGACAAGGGCAACATTCTTATGGTTGATGCC
AACCAGGTCTGGTCCGTCCCCGAAGCCATCACCTGGATGCAACAACTCGC
CGAATTCAAGCCTTGGTTCATCGAAGAGCCCACCTCCCCCGACGACATCC
TCGGCCACGCCGCCATCAAGAAGGCCCTCCAAGACACCCCCTACGGCCCC
ATCGGCGTCGCCACTGGCGAAATGTGCCAGAACCGCGTTGTCTTCAAGCA
GCTCCTGCAGGCAGGAGCCCTGACCGTCCTGCAAGCCGATGCCTGCCGTG
TCGGCGGTGTCAATGAAGTTCTGGCCATCTTGCTGCTTGCGCGCAAGTTC
GGCGTGCCGATCGTGCCTCACTCCGGTGGTGTCGGGTTGCCTGAGTACAC
TCAGCATCTGAGCACGATCGACTACGTGGTGGTCAGTGGAAAGAAGAGTG
TGTTGGAGTATGTGGATCACTTGCACGAGCACTTCGTGCACCCGTCTAGT
GTCAAGGATGGATACTATGTTACTCCGATGGAGCCGGGGTATAGTGTTGA
GATGAAGGCGGAGAGCATGGATGCGTTTTCGTTCCCTGGTGAGGAGGGCA
AGAGTTGGTGGAGGTCGGAGGAGGCGAAGACCATTCTGGAGGGGCCCCGG
ATAGTATAGATGGTCAAGATCACAAGTTTCACCACGAGGGACGTGAGGTT
TCCCACCTCCCTCGATAAAACCGGCTCAGATGCCATGAACGCTGCAGGCG
ACTACTCCTCCGCCTACTGCATCATCTACACTGACTCCGACTACACCGGC
CACGGCATGACCTTCACCATCGGCCGCGGCAATGAAATCGTCTGCTCCGC
CATCTCCCTCCTCGCTCCCCTCGTGGTCGGCAAAGACCTCGACGAACTTA
CCGCCGACTGGGGCAAGACCTGGCGCTACCTCGTCTCCGACAGCCAACTG
CGCTGGATCGGACCCGAGAAGGGTGTCATCCACCTGGCCCTTGGTGCCGT
CGTCAACGCTCTCTGGGATCTCTGGGCCAAGACCCTGAACAAACCTGTCT
GGCGCATTGTCGCGGACATGACCCCCGAGGAGTTTGTTCGCTGCATTGAC
TTCCGCTACATCACGGACGCCATTACACCCGAGGAGGCAATTGCCCTCCT
CAAGGAGGTCGAGGCCGGCAAGCAGGACCGTATCAAGGAAGCAGAGCAGA
GCCAGGCTGTACCGGCCTATACTACCAGTGCGGGTTGGCTGGGATACAGT
GAGGAAAAGCTGAAAGTCCTTCTCAAGGAGAGCGTCGAGCAGGGATACAA
GCACTTTAAGCTGAAGGTTGGCGGAAACGTCGAGGAAGACCGGAGGAGAT
TGGCTATTGCTCGTGAAGCTATTGGTTATGACAAGGGCAACATTCTTATG
GTTGATGCCAACCAGGTCTGGTCCGTCCCCGAAGCCATCACCTGGATGCA
ACAACTCGCCGAATTCAAGCCTTGGTTCATCGAAGAGCCCACCTCCCCCG
ACGACATCCTCGGCCACGCCGCCATCAAGAAGGCCCTCCAAGACACCCCC
TACGGCCCCATCGGCGTCGCCACTGGCGAAATGTGCCAGAACCGCGTTGT
CTTCAAGCAGCTCCTGCAGGCAGGAGCCCTGACCGTCCTGCAAGCCGATG
CCTGCCGTGTCGGCGGTGTCAATGAAGTTCTGGCCATCTTGCTGCTTGCG
CGCAAGTTCGGCGTGCCGATCGTGCCTCACTCCGGTGGTGTCGGGTTGCC
TGAGTACACTCAGCATCTGAGCACGATCGACTACGTGGTGGTCAGTGGAA
AGAAGAGTGTGTTGGAGTATGTGGATCACTTGCACGAGCACTTCGTGCAC
CCGTCTAGTGTCAAGGATGGATACTATGTTACTCCGATGGAGCCGGGGTA
TAGTGTTGAGATGAAGGCGGAGAGCATGGATGCGTTTTCGTTCCCTGGTG
AGGAGGGCAAGAGTTGGTGGAGGTCGGAGGAGGCGAAGACCATTCTGGAG
GGGCCCCGGATAGTATAGATGGTCAAGATCACAAGTTTCACCACGAGGGA
CGTGAGGTTTCCCACCTCCCTCGATAAAACCGGCTCAGATGCCATGAACG
CTGCAGGCGACTACTCCTCCGCCTACTGCATCATCTACACTGACTCCGAC
TACACCGGCCACGGCATGACCTTCACCATCGGCCGCGGCAATGAAATCGT
CTGCTCCGCCATCTCCCTCCTCGCTCCCCTCGTGGTCGGCAAAGACCTCG
ACGAACTTACCGCCGACTGGGGCAAGACCTGGCGCTACCTCGTCTCCGAC
AGCCAACTGCGCTGGATCGGACCCGAGAAGGGTGTCATCCACCTGGCCCT
TGGTGCCGTCGTCAACGCTCTCTGGGATCTCTGGGCCAAGACCCTGAACA
AACCTGTCTGGCGCATTGTCGCGGACATGACCCCCGAGGAGTTTGTTCGC
TGCATTGACTTCCGCTACATCACGGACGCCATTACACCCGAGGAGGCAAT
TGCCCTCCTCAAGGAGGTCGAGGCCGGCAAGCAGGACCGTATCAAGGAAG
CAGAGCAGAGCCAGGCTGTACCGGCCTATACTACCAGTGCGGGTTGGCTG
GGATACAGTGAGGAAAAGCTGAAAGTCCTTCTCAAGGAGAGCGTCGAGCA
GGGATACAAGCACTTTAAGCTGAAGGTTGGCGGAAACGTCGAGGAAGACC
GGAGGAGATTGGCTATTGCTCGTGAAGCTATTGGTTATGACAAGGGCAAC
ATTCTTATGGTTGATGCCAACCAGGTCTGGTCCGTCCCCGAAGCCATCAC
CTGGATGCAACAACTCGCCGAATTCAAGCCTTGGTTCATCGAAGAGCCCA
CCTCCCCCGACGACATCCTCGGCCACGCCGCCATCAAGAAGGCCCTCCAA
GACACCCCCTACGGCCCCATCGGCGTCGCCACTGGCGAAATGTGCCAGAA
CCGCGTTGTCTTCAAGCAGCTCCTGCAGGCAGGAGCCCTGACCGTCCTGC
AAGCCGATGCCTGCCGTGTCGGCGGTGTCAATGAAGTTCTGGCCATCTTG
CTGCTTGCGCGCAAGTTCGGCGTGCCGATCGTGCCTCACTCCGGTGGTGT
CGGGTTGCCTGAGTACACTCAGCATCTGAGCACGATCGACTACGTGGTGG
TCAGTGGAAAGAAGAGTGTGTTGGAGTATGTGGATCACTTGCACGAGCAC
TTCGTGCACCCGTCTAGTGTCAAGGATGGATACTATGTTACTCCGATGGA
GCCGGGGTATAGTGTTGAGATGAAGGCGGAGAGCATGGATGCGTTTTCGT
TCCCTGGTGAGGAGGGCAAGAGTTGGTGGAGGTCGGAGGAGGCGAAGACC
ATTCTGGAGGGGCCCCGGATAGTATAGATGGTCAAGATCACAAGTTTCAC
CACGAGGGACGTGAGGTTTCCCACCTCCCTCGATAAAACCGGCTCAGATG
CCATGAACGCTGCAGGCGACTACTCCTCCGCCTACTGCATCATCTACACT
GACTCCGACTACACCGGCCACGGCATGACCTTCACCATCGGCCGCGGCAA
TGAAATCGTCTGCTCCGCCATCTCCCTCCTCGCTCCCCTCGTGGTCGGCA
AAGACCTCGACGAACTTACCGCCGACTGGGGCAAGACCTGGCGCTACCTC
GTCTCCGACAGCCAACTGCGCTGGATCGGACCCGAGAAGGGTGTCATCCA
CCTGGCCCTTGGTGCCGTCGTCAACGCTCTCTGGGATCTCTGGGCCAAGA
CCCTGAACAAACCTGTCTGGCGCATTGTCGCGGACATGACCCCCGAGGAG
TTTGTTCGCTGCATTGACTTCCGCTACATCACGGACGCCATTACACCCGA
GGAGGCAATTGCCCTCCTCAAGGAGGTCGAGGCCGGCAAGCAGGACCGTA
TCAAGGAAGCAGAGCAGAGCCAGGCTGTACCGGCCTATACTACCAGTGCG
GGTTGGCTGGGATACAGTGAGGAAAAGCTGAAAGTCCTTCTCAAGGAGAG
CGTCGAGCAGGGATACAAGCACTTTAAGCTGAAGGTTGGCGGAAACGTCG
AGGAAGACCGGAGGAGATTGGCTATTGCTCGTGAAGCTATTGGTTATGAC
AAGGGCAACATTCTTATGGTTGATGCCAACCAGGTCTGGTCCGTCCCCGA
AGCCATCACCTGGATGCAACAACTCGCCGAATTCAAGCCTTGGTTCATCG
AAGAGCCCACCTCCCCCGACGACATCCTCGGCCACGCCGCCATCAAGAAG
GCCCTCCAAGACACCCCCTACGGCCCCATCGGCGTCGCCACTGGCGAAAT
GTGCCAGAACCGCGTTGTCTTCAAGCAGCTCCTGCAGGCAGGAGCCCTGA
CCGTCCTGCAAGCCGATGCCTGCCGTGTCGGCGGTGTCAATGAAGTTCTG
GCCATCTTGCTGCTTGCGCGCAAGTTCGGCGTGCCGATCGTGCCTCACTC
CGGTGGTGTCGGGTTGCCTGAGTACACTCAGCATCTGAGCACGATCGACT
ACGTGGTGGTCAGTGGAAAGAAGAGTGTGTTGGAGTATGTGGATCACTTG
CACGAGCACTTCGTGCACCCGTCTAGTGTCAAGGATGGATACTATGTTAC
TCCGATGGAGCCGGGGTATAGTGTTGAGATGAAGGCGGAGAGCATGGATG
CGTTTTCGTTCCCTGGTGAGGAGGGCAAGAGTTGGTGGAGGTCGGAGGAG
GCGAAGACCATTCTGGAGGGGCCCCGGATAGTATAG
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Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Molecular Function
TermDefinition
GO:0050023L-fuconate dehydratase activity
Vocabulary: Biological Process
TermDefinition
GO:0009063cellular amino acid catabolic process
GO:0016052carbohydrate catabolic process
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
LGD1ATCC64974_68890Aspergillus niger N402gene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ATCC64974_68890-T1.exon1ATCC64974_68890-T1.exon1Aspergillus niger N402exon
ATCC64974_68890-T1.exon2ATCC64974_68890-T1.exon2Aspergillus niger N402exon
ATCC64974_68890-T1.exon3ATCC64974_68890-T1.exon3Aspergillus niger N402exon
ATCC64974_68890-T1.exon4ATCC64974_68890-T1.exon4Aspergillus niger N402exon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ATCC64974_68890-T1.cdsATCC64974_68890-T1.cdsAspergillus niger N402CDS


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
ATCC64974_68890-T1ATCC64974_68890-T1-proteinAspergillus niger N402polypeptide


Properties
Property NameValue
DBxrefInterPro:IPR018110
DBxrefInterPro:IPR034610
DBxrefInterPro:IPR036849
DBxrefInterPro:IPR013341
DBxrefInterPro:IPR029065
DBxrefInterPro:IPR029017
DBxrefInterPro:IPR013342
DBxrefPFAM:PF02746
DBxrefPFAM:PF13378
ProductL-galactonate dehydratase
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger N402 whole genome analysis2021-11-01
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
OGUI01000010.1supercontigOGUI01000010.1:1947677..1949222 +
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