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ATCC64974_69010-T1, ATCC64974_69010-T1 (mRNA) Aspergillus niger N402

Overview
NameATCC64974_69010-T1
Unique NameATCC64974_69010-T1
TypemRNA
OrganismAspergillus niger N402
Sequences
The following sequences are available for this feature:

mRNA from alignment at OGUI01000010.1:1975296..1976732+

Legend: exonpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>ATCC64974_69010-T1 ID=ATCC64974_69010-T1|Name=ATCC64974_69010-T1|organism=Aspergillus niger N402|type=mRNA|length=1437bp|location=Sequence derived from alignment at OGUI01000010.1:1975296..1976732+ (Aspergillus niger N402)
ATGTCGAAGCTTGGAAAGTAAGCGGAAACTCCCCACCCCCAAAAAACCAG
GGCCACGAAGCGACAAAAAAGAAGAAAAAGAAAGAAAGAAAATCTGACCA
GGACCTTTTTCCACTTTCCAGCCGCGCCGACTGGGCCGACGACGAGGAGT
TCGACGACCCCTCCGCTCTCCCCCCGCAGCAAATCACGACCAACAAAGAT
GGCACGAAGACGATCGTCTCCTACCGATTCAACGACGAAGGCAAGAAGGT
GAAGGTGACCCGCCGGATCAAAACGACCGTTGTGCGCGAACATGTCAACC
CGCAGGTCGCGGAGCGGAGGTCCTGGGCCAAGTTCGGTCTGGAGAAGGGC
AACGCGCCCGGACCTTCGTTCGATACGACCTCCGTGGGTGAGAACATTGT
TTTCCGGCCCAGCGTCAACTGGAAGCTTCAGGCGGCTGAGGCGGAGAAGA
ACGGTGGCGAGAAGGGCAGTGTGAAGGATCAGCTGAAGGACAAGAAGGTC
AAGTGTCGTATTTGCAGTGGCGAGCACTTTACTGCTCGCTGTCCCTTCAA
GGATACTATGGCTCCTGTCGACGAGCCCACTGCTGGTGGAGAGGCTGGTG
ATGAGGATTCTCCGGCTGCTGGCGCTTTGGGTGCTGGTACTTCTAGCTAC
GTGCCCCCTCATCTGCGGAAGGGTGCTGCTGGTGGCGGAGAGAGAATGGC
TGGCAAGTATGAGAAGGATGATTTGGCGACTCTGAGAGTTACGAACGTGA
GTTTTCCCATCCCCTCCTTGTTTTGATTTACTGTTCTGTGTTTGGCTATT
TGCTGGTCTCCCCGGAGGGGTTGGGGGAGGGGTCGAGGGACAGGGGATGC
TAGTTTTCCTCTTTCTGTCTCTTTCTCTCCTCCTTTCCCTTGCCTGCTCT
GCCCTCCCTTTGCCCTCTAAACACTCCTATTGGTGTCGTTCAGAGGGAGA
AAGAAAGAGGCAGCAGCCCTTTCGGGCAGACACATGGATGTCATGAGAAC
AGCAATCAGCTTCCTCTAATTTCCTTGCTTCTATTGCATTTGCTTCCCAC
GGACACATCACTGACTGACAATAAACCCAAACAGGTGAGCGAGTTGGCAG
AGGAAGGAGAACTGCGGGATCTGTTCGAACGCTTCGGTCGTGTCACCAGA
GTCTTCCTTGCCAGAGACAGAGAAACCCAGAGAGCCAAGGGCTTCGCTTT
CATCAGCTTTGCGGATCGGAGCGATGCTGCACGTGCTTGCGAGAAGATGG
ATGGCTGTAAGTTATCCCTCCCGGTTACGTTTCCATTTTTCGTCATATTC
TGTTTTGTTTTTTTCCGCCATCGTTGCAATGTCAGCAGCAAAGCAAGTTA
TCGGAATCGCAACTAACATTTCCTCTTCATCTAGTCGGTTACCGTCACCT
TATCCTGCGCGTCGAATTCGCCAAGCGTGCCACTTAG
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Coding sequence (CDS) from alignment at OGUI01000010.1:1975296..1976732+

>ATCC64974_69010-T1 ID=ATCC64974_69010-T1|Name=ATCC64974_69010-T1|organism=Aspergillus niger N402|type=CDS|length=3468bp|location=Sequence derived from alignment at OGUI01000010.1:1975296..1976732+ (Aspergillus niger N402)
ATGTCGAAGCTTGGAAACCGCGCCGACTGGGCCGACGACGAGGAGTTCGA
CGACCCCTCCGCTCTCCCCCCGCAGCAAATCACGACCAACAAAGATGGCA
CGAAGACGATCGTCTCCTACCGATTCAACGACGAAGGCAAGAAGGTGAAG
GTGACCCGCCGGATCAAAACGACCGTTGTGCGCGAACATGTCAACCCGCA
GGTCGCGGAGCGGAGGTCCTGGGCCAAGTTCGGTCTGGAGAAGGGCAACG
CGCCCGGACCTTCGTTCGATACGACCTCCGTGGGTGAGAACATTGTTTTC
CGGCCCAGCGTCAACTGGAAGCTTCAGGCGGCTGAGGCGGAGAAGAACGG
TGGCGAGAAGGGCAGTGTGAAGGATCAGCTGAAGGACAAGAAGGTCAAGT
GTCGTATTTGCAGTGGCGAGCACTTTACTGCTCGCTGTCCCTTCAAGGAT
ACTATGGCTCCTGTCGACGAGCCCACTGCTGGTGGAGAGGCTGGTGATGA
GGATTCTCCGGCTGCTGGCGCTTTGGGTGCTGGTACTTCTAGCTACGTGC
CCCCTCATCTGCGGAAGGGTGCTGCTGGTGGCGGAGAGAGAATGGCTGGC
AAGTATGAGAAGGATGATTTGGCGACTCTGAGAGTTACGAACGTGAGCGA
GTTGGCAGAGGAAGGAGAACTGCGGGATCTGTTCGAACGCTTCGGTCGTG
TCACCAGAGTCTTCCTTGCCAGAGACAGAGAAACCCAGAGAGCCAAGGGC
TTCGCTTTCATCAGCTTTGCGGATCGGAGCGATGCTGCACGTGCTTGCGA
GAAGATGGATGGCTTCGGTTACCGTCACCTTATCCTGCGCGTCGAATTCG
CCAAGCGTGCCACTTAGATGTCGAAGCTTGGAAACCGCGCCGACTGGGCC
GACGACGAGGAGTTCGACGACCCCTCCGCTCTCCCCCCGCAGCAAATCAC
GACCAACAAAGATGGCACGAAGACGATCGTCTCCTACCGATTCAACGACG
AAGGCAAGAAGGTGAAGGTGACCCGCCGGATCAAAACGACCGTTGTGCGC
GAACATGTCAACCCGCAGGTCGCGGAGCGGAGGTCCTGGGCCAAGTTCGG
TCTGGAGAAGGGCAACGCGCCCGGACCTTCGTTCGATACGACCTCCGTGG
GTGAGAACATTGTTTTCCGGCCCAGCGTCAACTGGAAGCTTCAGGCGGCT
GAGGCGGAGAAGAACGGTGGCGAGAAGGGCAGTGTGAAGGATCAGCTGAA
GGACAAGAAGGTCAAGTGTCGTATTTGCAGTGGCGAGCACTTTACTGCTC
GCTGTCCCTTCAAGGATACTATGGCTCCTGTCGACGAGCCCACTGCTGGT
GGAGAGGCTGGTGATGAGGATTCTCCGGCTGCTGGCGCTTTGGGTGCTGG
TACTTCTAGCTACGTGCCCCCTCATCTGCGGAAGGGTGCTGCTGGTGGCG
GAGAGAGAATGGCTGGCAAGTATGAGAAGGATGATTTGGCGACTCTGAGA
GTTACGAACGTGAGCGAGTTGGCAGAGGAAGGAGAACTGCGGGATCTGTT
CGAACGCTTCGGTCGTGTCACCAGAGTCTTCCTTGCCAGAGACAGAGAAA
CCCAGAGAGCCAAGGGCTTCGCTTTCATCAGCTTTGCGGATCGGAGCGAT
GCTGCACGTGCTTGCGAGAAGATGGATGGCTTCGGTTACCGTCACCTTAT
CCTGCGCGTCGAATTCGCCAAGCGTGCCACTTAGATGTCGAAGCTTGGAA
ACCGCGCCGACTGGGCCGACGACGAGGAGTTCGACGACCCCTCCGCTCTC
CCCCCGCAGCAAATCACGACCAACAAAGATGGCACGAAGACGATCGTCTC
CTACCGATTCAACGACGAAGGCAAGAAGGTGAAGGTGACCCGCCGGATCA
AAACGACCGTTGTGCGCGAACATGTCAACCCGCAGGTCGCGGAGCGGAGG
TCCTGGGCCAAGTTCGGTCTGGAGAAGGGCAACGCGCCCGGACCTTCGTT
CGATACGACCTCCGTGGGTGAGAACATTGTTTTCCGGCCCAGCGTCAACT
GGAAGCTTCAGGCGGCTGAGGCGGAGAAGAACGGTGGCGAGAAGGGCAGT
GTGAAGGATCAGCTGAAGGACAAGAAGGTCAAGTGTCGTATTTGCAGTGG
CGAGCACTTTACTGCTCGCTGTCCCTTCAAGGATACTATGGCTCCTGTCG
ACGAGCCCACTGCTGGTGGAGAGGCTGGTGATGAGGATTCTCCGGCTGCT
GGCGCTTTGGGTGCTGGTACTTCTAGCTACGTGCCCCCTCATCTGCGGAA
GGGTGCTGCTGGTGGCGGAGAGAGAATGGCTGGCAAGTATGAGAAGGATG
ATTTGGCGACTCTGAGAGTTACGAACGTGAGCGAGTTGGCAGAGGAAGGA
GAACTGCGGGATCTGTTCGAACGCTTCGGTCGTGTCACCAGAGTCTTCCT
TGCCAGAGACAGAGAAACCCAGAGAGCCAAGGGCTTCGCTTTCATCAGCT
TTGCGGATCGGAGCGATGCTGCACGTGCTTGCGAGAAGATGGATGGCTTC
GGTTACCGTCACCTTATCCTGCGCGTCGAATTCGCCAAGCGTGCCACTTA
GATGTCGAAGCTTGGAAACCGCGCCGACTGGGCCGACGACGAGGAGTTCG
ACGACCCCTCCGCTCTCCCCCCGCAGCAAATCACGACCAACAAAGATGGC
ACGAAGACGATCGTCTCCTACCGATTCAACGACGAAGGCAAGAAGGTGAA
GGTGACCCGCCGGATCAAAACGACCGTTGTGCGCGAACATGTCAACCCGC
AGGTCGCGGAGCGGAGGTCCTGGGCCAAGTTCGGTCTGGAGAAGGGCAAC
GCGCCCGGACCTTCGTTCGATACGACCTCCGTGGGTGAGAACATTGTTTT
CCGGCCCAGCGTCAACTGGAAGCTTCAGGCGGCTGAGGCGGAGAAGAACG
GTGGCGAGAAGGGCAGTGTGAAGGATCAGCTGAAGGACAAGAAGGTCAAG
TGTCGTATTTGCAGTGGCGAGCACTTTACTGCTCGCTGTCCCTTCAAGGA
TACTATGGCTCCTGTCGACGAGCCCACTGCTGGTGGAGAGGCTGGTGATG
AGGATTCTCCGGCTGCTGGCGCTTTGGGTGCTGGTACTTCTAGCTACGTG
CCCCCTCATCTGCGGAAGGGTGCTGCTGGTGGCGGAGAGAGAATGGCTGG
CAAGTATGAGAAGGATGATTTGGCGACTCTGAGAGTTACGAACGTGAGCG
AGTTGGCAGAGGAAGGAGAACTGCGGGATCTGTTCGAACGCTTCGGTCGT
GTCACCAGAGTCTTCCTTGCCAGAGACAGAGAAACCCAGAGAGCCAAGGG
CTTCGCTTTCATCAGCTTTGCGGATCGGAGCGATGCTGCACGTGCTTGCG
AGAAGATGGATGGCTTCGGTTACCGTCACCTTATCCTGCGCGTCGAATTC
GCCAAGCGTGCCACTTAG
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Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Cellular Component
TermDefinition
GO:0005737cytoplasm
GO:0005852eukaryotic translation initiation factor 3 complex
Vocabulary: Molecular Function
TermDefinition
GO:0003743translation initiation factor activity
GO:0003676nucleic acid binding
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
TIF35ATCC64974_69010Aspergillus niger N402gene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ATCC64974_69010-T1.exon1ATCC64974_69010-T1.exon1Aspergillus niger N402exon
ATCC64974_69010-T1.exon2ATCC64974_69010-T1.exon2Aspergillus niger N402exon
ATCC64974_69010-T1.exon3ATCC64974_69010-T1.exon3Aspergillus niger N402exon
ATCC64974_69010-T1.exon4ATCC64974_69010-T1.exon4Aspergillus niger N402exon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ATCC64974_69010-T1.cdsATCC64974_69010-T1.cdsAspergillus niger N402CDS


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
ATCC64974_69010-T1ATCC64974_69010-T1-proteinAspergillus niger N402polypeptide


Properties
Property NameValue
NoteBUSCO:EOG0926489S
DBxrefInterPro:IPR035979
DBxrefInterPro:IPR034240
DBxrefInterPro:IPR017334
DBxrefInterPro:IPR024675
DBxrefInterPro:IPR012677
DBxrefInterPro:IPR000504
DBxrefPFAM:PF00076
DBxrefPFAM:PF12353
Producttranslation initiation factor eIF3 subunit g
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger N402 whole genome analysis2021-11-01
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
OGUI01000010.1supercontigOGUI01000010.1:1975296..1976732 +
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