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Sequences
The following sequences are available for this feature:
mRNA from alignment at OGUI01000010.1:2125370..2126513+ Legend: exonpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >ATCC64974_69490-T1 ID=ATCC64974_69490-T1|Name=ATCC64974_69490-T1|organism=Aspergillus niger N402|type=mRNA|length=1144bp|location=Sequence derived from alignment at OGUI01000010.1:2125370..2126513+ (Aspergillus niger N402) ATGCTGGCCGAAACCGAAAACCCCGTCAGCAACGGAGATCCACCGAAGCT
CCGGGCTGCTTGTGAAAATTGCAGACAGTCGAAGGTGAAATGTAACCTAT
CTGGGAAGGACACCTGCATTCGCTGTATGCGTCATGGGCTGCCCTGTCGG
TATCGCGTCGCCAATCGTTCTGGGAAGCCAAAAGGGAGCAAGAATCGGGC
CACGCTGCGAAAACTTGGGCAGTTGCAAGACGAGAAGAAGCCTACAATAC
CCGCCAACGGATGGGTAGAATCGGTAGCCAAAGGACAACCGCCTCGTGTG
AGCTATGATACTGACAACGGGGTCGACGCAACGGTGCGTTTCATCTGTGC
TCGTTAAGGGTAATATCTAATGGTTATAGAGTACGCAAAGCACGAGCCCA
GCCAGTCAGTCCAGAAGCCCTGATAGCCACGGGGCAAATATGACTGACAC
GACGTTGCTGACCGATCCAACCATGGAGTATCCGTCAATAGGGGAGACGT
TGGCCCCTATGTTCAATCCCTCCATGTCACCACCATTCCTTCCCAAAGAG
TTCATCTCCCGGGGCTTCACCGGCTGTCCGCTCGCCGTCCACATCCCCAA
CCCATTACAGCCCTGTGAATGCACCAACGCACTCCTATACAACGTAAATC
AGATCCGGACCATGCTGGCAGACAGCATGCATCTACGGCTGGACCAGATT
TTACAGGGCATCAAGATCGCATTGACCGTGTGTCGGAACTTTCTCCGATG
TCCCAATTGCCACAAGGACCACACAAACCTACTGTATTCAGTATCCATAC
TGGATATCACACTCCAGCTCTTCGAGTATTGGACATCGTATGAGCTCTCA
TCCGCGCCGGCTGGCGGCCACAACATGATCGTCCCCTACGGCGACTACGA
GATGGGCCCGGACGAGACGCGCCGGATCCGCCGGTACCTCATCCGAGGAC
GGGCCCTGCAGTGCCGAGAGGTACTGGGACTGCTCAAGGACGCAGTTGAA
ATGAGCCGACATCTGAGTCCCGAGCTGCGGGAGCTCAATGGGACGGACGG
ATTGGAGGTGGAATGGTTCCAGCAGATGCTGGGGGGGTATGATACGATGG
TTGAGACGATTTTACGAGCGATGTCGGATAATCTGTGCACGTAG back to topCoding sequence (CDS) from alignment at OGUI01000010.1:2125370..2126513+ >ATCC64974_69490-T1 ID=ATCC64974_69490-T1|Name=ATCC64974_69490-T1|organism=Aspergillus niger N402|type=CDS|length=2196bp|location=Sequence derived from alignment at OGUI01000010.1:2125370..2126513+ (Aspergillus niger N402) ATGCTGGCCGAAACCGAAAACCCCGTCAGCAACGGAGATCCACCGAAGCT CCGGGCTGCTTGTGAAAATTGCAGACAGTCGAAGGTGAAATGTAACCTAT CTGGGAAGGACACCTGCATTCGCTGTATGCGTCATGGGCTGCCCTGTCGG TATCGCGTCGCCAATCGTTCTGGGAAGCCAAAAGGGAGCAAGAATCGGGC CACGCTGCGAAAACTTGGGCAGTTGCAAGACGAGAAGAAGCCTACAATAC CCGCCAACGGATGGGTAGAATCGGTAGCCAAAGGACAACCGCCTCGTGTG AGCTATGATACTGACAACGGGGTCGACGCAACGAGTACGCAAAGCACGAG CCCAGCCAGTCAGTCCAGAAGCCCTGATAGCCACGGGGCAAATATGACTG ACACGACGTTGCTGACCGATCCAACCATGGAGTATCCGTCAATAGGGGAG ACGTTGGCCCCTATGTTCAATCCCTCCATGTCACCACCATTCCTTCCCAA AGAGTTCATCTCCCGGGGCTTCACCGGCTGTCCGCTCGCCGTCCACATCC CCAACCCATTACAGCCCTGTGAATGCACCAACGCACTCCTATACAACGTA AATCAGATCCGGACCATGCTGGCAGACAGCATGCATCTACGGCTGGACCA GATTTTACAGGGCATCAAGATCGCATTGACCGTGTGTCGGAACTTTCTCC GATGTCCCAATTGCCACAAGGACCACACAAACCTACTGTATTCAGTATCC ATACTGGATATCACACTCCAGCTCTTCGAGTATTGGACATCGTATGAGCT CTCATCCGCGCCGGCTGGCGGCCACAACATGATCGTCCCCTACGGCGACT ACGAGATGGGCCCGGACGAGACGCGCCGGATCCGCCGGTACCTCATCCGA GGACGGGCCCTGCAGTGCCGAGAGGTACTGGGACTGCTCAAGGACGCAGT TGAAATGAGCCGACATCTGAGTCCCGAGCTGCGGGAGCTCAATGGGACGG ACGGATTGGAGGTGGAATGGTTCCAGCAGATGCTGGGGGGGTATGATACG ATGGTTGAGACGATTTTACGAGCGATGTCGGATAATCTGTGCACGTAGAT GCTGGCCGAAACCGAAAACCCCGTCAGCAACGGAGATCCACCGAAGCTCC GGGCTGCTTGTGAAAATTGCAGACAGTCGAAGGTGAAATGTAACCTATCT GGGAAGGACACCTGCATTCGCTGTATGCGTCATGGGCTGCCCTGTCGGTA TCGCGTCGCCAATCGTTCTGGGAAGCCAAAAGGGAGCAAGAATCGGGCCA CGCTGCGAAAACTTGGGCAGTTGCAAGACGAGAAGAAGCCTACAATACCC GCCAACGGATGGGTAGAATCGGTAGCCAAAGGACAACCGCCTCGTGTGAG CTATGATACTGACAACGGGGTCGACGCAACGAGTACGCAAAGCACGAGCC CAGCCAGTCAGTCCAGAAGCCCTGATAGCCACGGGGCAAATATGACTGAC ACGACGTTGCTGACCGATCCAACCATGGAGTATCCGTCAATAGGGGAGAC GTTGGCCCCTATGTTCAATCCCTCCATGTCACCACCATTCCTTCCCAAAG AGTTCATCTCCCGGGGCTTCACCGGCTGTCCGCTCGCCGTCCACATCCCC AACCCATTACAGCCCTGTGAATGCACCAACGCACTCCTATACAACGTAAA TCAGATCCGGACCATGCTGGCAGACAGCATGCATCTACGGCTGGACCAGA TTTTACAGGGCATCAAGATCGCATTGACCGTGTGTCGGAACTTTCTCCGA TGTCCCAATTGCCACAAGGACCACACAAACCTACTGTATTCAGTATCCAT ACTGGATATCACACTCCAGCTCTTCGAGTATTGGACATCGTATGAGCTCT CATCCGCGCCGGCTGGCGGCCACAACATGATCGTCCCCTACGGCGACTAC GAGATGGGCCCGGACGAGACGCGCCGGATCCGCCGGTACCTCATCCGAGG ACGGGCCCTGCAGTGCCGAGAGGTACTGGGACTGCTCAAGGACGCAGTTG AAATGAGCCGACATCTGAGTCCCGAGCTGCGGGAGCTCAATGGGACGGAC GGATTGGAGGTGGAATGGTTCCAGCAGATGCTGGGGGGGTATGATACGAT GGTTGAGACGATTTTACGAGCGATGTCGGATAATCTGTGCACGTAG back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Cellular Component
Term | Definition |
GO:0005634 | nucleus |
Vocabulary: Biological Process
Term | Definition |
GO:0006355 | regulation of transcription, DNA-templated |
Vocabulary: Molecular Function
Term | Definition |
GO:0008270 | zinc ion binding |
GO:0000981 | DNA-binding transcription factor activity, RNA polymerase II-specific |
Relationships
This mRNA is a part of the following gene feature(s):
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Feature Name | Unique Name | Species | Type |
ATCC64974_69490-T1 | ATCC64974_69490-T1-protein | Aspergillus niger N402 | polypeptide |
Properties
Property Name | Value |
DBxref | InterPro:IPR036864 |
DBxref | InterPro:IPR001138 |
DBxref | PFAM:PF00172 |
Product | hypothetical protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
Aligned Feature | Feature Type | Alignment Location |
OGUI01000010.1 | supercontig | OGUI01000010.1:2125370..2126513 + |
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