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ATCC64974_69730-T1, ATCC64974_69730-T1 (mRNA) Aspergillus niger N402

Overview
NameATCC64974_69730-T1
Unique NameATCC64974_69730-T1
TypemRNA
OrganismAspergillus niger N402
Sequences
The following sequences are available for this feature:

mRNA from alignment at OGUI01000010.1:2197559..2198549+

Legend: polypeptideexonCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>ATCC64974_69730-T1 ID=ATCC64974_69730-T1|Name=ATCC64974_69730-T1|organism=Aspergillus niger N402|type=mRNA|length=991bp|location=Sequence derived from alignment at OGUI01000010.1:2197559..2198549+ (Aspergillus niger N402)
ATGGCTCAACAACAGACTGATAATGTGATGCGAAGGTATGTTCCGCCAAT
GTTGTCGTCCCTGTGTTCGGTTTCCCACCTGAGGCCATCATGTTATCTAC
TGCCGATTTCTGGTTCCCGTTATCAGCCCACCCGCTGTCACTCGACCGGA
TTGCTCGTATAGAGGGGTGCGGGGGTGCAGCCAGCCCCCGATGCAACATC
CATGCTATGACGAATGGGGCCCTGAGCTGACCTGCATGTAGAAAGTTGGT
GATCATCGGGGATGGTGCCTGTGGGAAGACCAGTCTGCTGAGCGTCTTCA
CCCTGGGCTATTTTCCAACCGTAAGTCAACCCTCTTCTCCAATGCGCTGA
TCGATGGAGTTTCATTGGCTAACCGGTTTCTGATCTGTAGCACTATGTTC
GTACCTATCACCTCCTTCGCTGACTACCTAGCATGCATCTGACTGTCGCC
TATCAATCAGGTTCCGACGGTATTCGAAAACTATGTGACGGATTGCCGAG
TGGATGGCCGTTCGGTTCAATTGGCACTATGGGATACTGCTGGTCAGGAA
GATTACGAACGATTGCGTCCACTCGCCTATTCCAAGGCGCATGTGATCCT
CATTGGGTTCTCCGTGGACACGCCCGATTCGCTCGAGAACGTCAAACACA
AGGTTGTCTGACCATCTAGTCACTGTTGGACTACGCTGACTGGTTGCTTA
TAGTGGATTGAAGAAGCGAACGAACGATGTCCGGGTGTCCCCATCATCCT
TGTCGGGTTGAAGAAAGATCTGCGGGAAGATCCTCTGGCCGTCGAGGAGA
TGAGAAAGAAGTCGCTAAAGTTCGTGACGCCCAAAGAAGGAAGCGATATT
TCAACGCAGATCGGAGCCCGCAAGTATCTCGAATGTTCCTCGTTAACCGG
CGAGGGCGTCGACGATGTATTCGAGGCGGCCACGCGTGCCGCGCTTCTGA
CGTTCGACAAGCGAAAAAGCTCCTGTTGCATTGTGCTATAA
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Coding sequence (CDS) from alignment at OGUI01000010.1:2197559..2198549+

>ATCC64974_69730-T1 ID=ATCC64974_69730-T1|Name=ATCC64974_69730-T1|organism=Aspergillus niger N402|type=CDS|length=3000bp|location=Sequence derived from alignment at OGUI01000010.1:2197559..2198549+ (Aspergillus niger N402)
ATGGCTCAACAACAGACTGATAATGTGATGCGAAGAAAGTTGGTGATCAT
CGGGGATGGTGCCTGTGGGAAGACCAGTCTGCTGAGCGTCTTCACCCTGG
GCTATTTTCCAACCCACTATGTTCCGACGGTATTCGAAAACTATGTGACG
GATTGCCGAGTGGATGGCCGTTCGGTTCAATTGGCACTATGGGATACTGC
TGGTCAGGAAGATTACGAACGATTGCGTCCACTCGCCTATTCCAAGGCGC
ATGTGATCCTCATTGGGTTCTCCGTGGACACGCCCGATTCGCTCGAGAAC
GTCAAACACAAGTGGATTGAAGAAGCGAACGAACGATGTCCGGGTGTCCC
CATCATCCTTGTCGGGTTGAAGAAAGATCTGCGGGAAGATCCTCTGGCCG
TCGAGGAGATGAGAAAGAAGTCGCTAAAGTTCGTGACGCCCAAAGAAGGA
AGCGATATTTCAACGCAGATCGGAGCCCGCAAGTATCTCGAATGTTCCTC
GTTAACCGGCGAGGGCGTCGACGATGTATTCGAGGCGGCCACGCGTGCCG
CGCTTCTGACGTTCGACAAGCGAAAAAGCTCCTGTTGCATTGTGCTATAA
ATGGCTCAACAACAGACTGATAATGTGATGCGAAGAAAGTTGGTGATCAT
CGGGGATGGTGCCTGTGGGAAGACCAGTCTGCTGAGCGTCTTCACCCTGG
GCTATTTTCCAACCCACTATGTTCCGACGGTATTCGAAAACTATGTGACG
GATTGCCGAGTGGATGGCCGTTCGGTTCAATTGGCACTATGGGATACTGC
TGGTCAGGAAGATTACGAACGATTGCGTCCACTCGCCTATTCCAAGGCGC
ATGTGATCCTCATTGGGTTCTCCGTGGACACGCCCGATTCGCTCGAGAAC
GTCAAACACAAGTGGATTGAAGAAGCGAACGAACGATGTCCGGGTGTCCC
CATCATCCTTGTCGGGTTGAAGAAAGATCTGCGGGAAGATCCTCTGGCCG
TCGAGGAGATGAGAAAGAAGTCGCTAAAGTTCGTGACGCCCAAAGAAGGA
AGCGATATTTCAACGCAGATCGGAGCCCGCAAGTATCTCGAATGTTCCTC
GTTAACCGGCGAGGGCGTCGACGATGTATTCGAGGCGGCCACGCGTGCCG
CGCTTCTGACGTTCGACAAGCGAAAAAGCTCCTGTTGCATTGTGCTATAA
ATGGCTCAACAACAGACTGATAATGTGATGCGAAGAAAGTTGGTGATCAT
CGGGGATGGTGCCTGTGGGAAGACCAGTCTGCTGAGCGTCTTCACCCTGG
GCTATTTTCCAACCCACTATGTTCCGACGGTATTCGAAAACTATGTGACG
GATTGCCGAGTGGATGGCCGTTCGGTTCAATTGGCACTATGGGATACTGC
TGGTCAGGAAGATTACGAACGATTGCGTCCACTCGCCTATTCCAAGGCGC
ATGTGATCCTCATTGGGTTCTCCGTGGACACGCCCGATTCGCTCGAGAAC
GTCAAACACAAGTGGATTGAAGAAGCGAACGAACGATGTCCGGGTGTCCC
CATCATCCTTGTCGGGTTGAAGAAAGATCTGCGGGAAGATCCTCTGGCCG
TCGAGGAGATGAGAAAGAAGTCGCTAAAGTTCGTGACGCCCAAAGAAGGA
AGCGATATTTCAACGCAGATCGGAGCCCGCAAGTATCTCGAATGTTCCTC
GTTAACCGGCGAGGGCGTCGACGATGTATTCGAGGCGGCCACGCGTGCCG
CGCTTCTGACGTTCGACAAGCGAAAAAGCTCCTGTTGCATTGTGCTATAA
ATGGCTCAACAACAGACTGATAATGTGATGCGAAGAAAGTTGGTGATCAT
CGGGGATGGTGCCTGTGGGAAGACCAGTCTGCTGAGCGTCTTCACCCTGG
GCTATTTTCCAACCCACTATGTTCCGACGGTATTCGAAAACTATGTGACG
GATTGCCGAGTGGATGGCCGTTCGGTTCAATTGGCACTATGGGATACTGC
TGGTCAGGAAGATTACGAACGATTGCGTCCACTCGCCTATTCCAAGGCGC
ATGTGATCCTCATTGGGTTCTCCGTGGACACGCCCGATTCGCTCGAGAAC
GTCAAACACAAGTGGATTGAAGAAGCGAACGAACGATGTCCGGGTGTCCC
CATCATCCTTGTCGGGTTGAAGAAAGATCTGCGGGAAGATCCTCTGGCCG
TCGAGGAGATGAGAAAGAAGTCGCTAAAGTTCGTGACGCCCAAAGAAGGA
AGCGATATTTCAACGCAGATCGGAGCCCGCAAGTATCTCGAATGTTCCTC
GTTAACCGGCGAGGGCGTCGACGATGTATTCGAGGCGGCCACGCGTGCCG
CGCTTCTGACGTTCGACAAGCGAAAAAGCTCCTGTTGCATTGTGCTATAA
ATGGCTCAACAACAGACTGATAATGTGATGCGAAGAAAGTTGGTGATCAT
CGGGGATGGTGCCTGTGGGAAGACCAGTCTGCTGAGCGTCTTCACCCTGG
GCTATTTTCCAACCCACTATGTTCCGACGGTATTCGAAAACTATGTGACG
GATTGCCGAGTGGATGGCCGTTCGGTTCAATTGGCACTATGGGATACTGC
TGGTCAGGAAGATTACGAACGATTGCGTCCACTCGCCTATTCCAAGGCGC
ATGTGATCCTCATTGGGTTCTCCGTGGACACGCCCGATTCGCTCGAGAAC
GTCAAACACAAGTGGATTGAAGAAGCGAACGAACGATGTCCGGGTGTCCC
CATCATCCTTGTCGGGTTGAAGAAAGATCTGCGGGAAGATCCTCTGGCCG
TCGAGGAGATGAGAAAGAAGTCGCTAAAGTTCGTGACGCCCAAAGAAGGA
AGCGATATTTCAACGCAGATCGGAGCCCGCAAGTATCTCGAATGTTCCTC
GTTAACCGGCGAGGGCGTCGACGATGTATTCGAGGCGGCCACGCGTGCCG
CGCTTCTGACGTTCGACAAGCGAAAAAGCTCCTGTTGCATTGTGCTATAA
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Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Biological Process
TermDefinition
GO:0007264small GTPase mediated signal transduction
Vocabulary: Molecular Function
TermDefinition
GO:0003924GTPase activity
GO:0005525GTP binding
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
RHO2ATCC64974_69730Aspergillus niger N402gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
ATCC64974_69730-T1ATCC64974_69730-T1-proteinAspergillus niger N402polypeptide


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ATCC64974_69730-T1.exon1ATCC64974_69730-T1.exon1Aspergillus niger N402exon
ATCC64974_69730-T1.exon2ATCC64974_69730-T1.exon2Aspergillus niger N402exon
ATCC64974_69730-T1.exon3ATCC64974_69730-T1.exon3Aspergillus niger N402exon
ATCC64974_69730-T1.exon4ATCC64974_69730-T1.exon4Aspergillus niger N402exon
ATCC64974_69730-T1.exon5ATCC64974_69730-T1.exon5Aspergillus niger N402exon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ATCC64974_69730-T1.cdsATCC64974_69730-T1.cdsAspergillus niger N402CDS


Properties
Property NameValue
DBxrefInterPro:IPR027417
DBxrefInterPro:IPR003578
DBxrefInterPro:IPR001806
DBxrefInterPro:IPR005225
DBxrefPFAM:PF08477
DBxrefPFAM:PF00071
DBxrefPFAM:PF00025
ProductRho GTPase
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger N402 whole genome analysis2021-11-01
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
OGUI01000010.1supercontigOGUI01000010.1:2197559..2198549 +
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