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ATCC64974_69940-T1, ATCC64974_69940-T1 (mRNA) Aspergillus niger N402

Overview
NameATCC64974_69940-T1
Unique NameATCC64974_69940-T1
TypemRNA
OrganismAspergillus niger N402
Sequences
The following sequences are available for this feature:

mRNA from alignment at OGUI01000010.1:2253808..2256109+

Legend: exonpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>ATCC64974_69940-T1 ID=ATCC64974_69940-T1|Name=ATCC64974_69940-T1|organism=Aspergillus niger N402|type=mRNA|length=2302bp|location=Sequence derived from alignment at OGUI01000010.1:2253808..2256109+ (Aspergillus niger N402)
ATGTCGCAGGATACAGGATTGTTCAGCATCAGGCGCACCCGCGAGGTATG
TGCCTTGCTTCCTTCTGGCCTACCCCTCTTGTACAATACTAATCTAGCTG
TCTCAGTCTATGGCGATGGGTAGCCAAAATTACTCCGCTCTTCCGCAACC
CTCCTCGGCCTTGAAGCGCACCAGCTCCATTGGGTACCAGAATCCTCCTT
TCACCTCTCAGCACACGCGTATGTCGCTTCTCAACTCCGCCAGTCGCCCC
CAACAGCCCAACTTTCAGCGTTCTTCTTCTGGTGGAGGCTTTGGTGCCGA
TGCCGGTCTCTCATCAGTCAGACGCTCCGTCTCCAGTAATATGTTCCATG
GTCCTAGTGTCGGGCGCCCAAGCTTTGCTCCCGGGCCGATGTCGTCGCAA
AGCACAGCAGGGTCGCAAGGATTGCAACGGAGGAGTAGTGTCTTTTCACG
ACCATCTGTGGGTGGCGCCATGGGTCATCATTCTTTCTTCACTCAAGTCC
CGTCAGTTGCTGGTGTCCCCAGGGACCCACGGCCACTCAGGGACAGGTCT
TTCCAAGCTCGTATTGGACAAGAGCTCTTGGAATATCTGACGCATAACAA
TTTTGAGCTTGAGATGAAGCATTCACTGGGGCAGAACACCTTACGGTCTC
CTACTCAAAAAGATTTCAACTACATCTTCCAGTGGCTGTATCATCGCATT
GATCCCGGGTACAAGTTTCAGAAGAGCATGGATGCGGAGGTACCACCTAT
TCTCAAGCAACTACGTTACCCCTACGAAAAGGGTATCACTAAGTCGCAGA
TTGCGGCTGTGGGAGGCCAGAACTGGCCGACATTCCTCGGTATGCTGCAT
TGGTTGATGCAACTCGCTCAGATGATGGATCGATATTTGCTCGGGGAATA
CGATGAAGCTTGCGCAGAGATGGGAGTCGATGTATCCGGCGACCGGATTA
TCTTCCGTTTCCTTACAAGTGCCTACCATGACTGGCTGCAAGGCGGGGAA
GATGAGGATGACGCAACAGCAGAGAAGAGACTAGTACCTCACGTCGAAAT
GATGGCCCAGGAGTTTGAAAGAGGAAATGAAAAATATGTTCAAGAGATGG
AGTCTTTGGAAGCCGAAAACCGAGCGCTACGTGACCAGATTGAAGAGATG
GAGAAGAACGCTCCGGACATGGCCAAGCTAGACAAGCACTTCAGGATTTT
GGAGGACGACAAGAGGAAGTTTGAGGACTACAACCAGAATGTCCAGGGCA
AGATCGAGAAATATGAGACCCGTATCAAATTCCTGGATGACGAGCTTAAG
AAGACGGAGGATGACCTGCAAGCCGCCGAAGAGGAGCGGGCTGGGCTTCA
GGCCAGTGTTGACCAACAAGGCCTGACAATCCAGGATATTGACCGTATGA
ACACGGAACGTGAACGCCTGCAGAGGAATCTTGACGATACGGTCAATCGG
TTGGAAGAAACGCACGCGCGGGTCATGGCAAAGGAGGCCGAGGCTAGTAG
AAAACTCGAAGATTTAGAGGAGATCGTCAAGGTCTACAACACGCTCGGAT
ACCAGAATAGTTTGATTCCTTCGTCAGCTGTCAATGCCAAGGGCGACGAT
TACGAACTCAGTCTCAACGTCAACGAGAGCAATTTCTCCGCCTCTCAGGT
CGGTGGTCTAGCGAACCGAATCTCTACCGATGGAGATCGACTATTGGCGG
ACCCGTTCACTGGCTATCACCCAGCACACTTGCTCAACCTCGATCTCCGC
GGCATCGTGCGCAGCAATCTACAGGCTCTCCGGAAGGAGATCAACGAGCG
CCGGAAGCGTGCCATTGATGATGACTTGGAACGACGCAATCTCTTGGACA
ACATCAAGGAAGCAATGGACGAGAAGCGAAGCGAGGTTGAGGCTTTGGAG
CATAAGGCACGTGCCGCTGAAGAGGAATTCGAGCGGCTCAAGGAGGTCAC
CACAACGCAGAAGCTTGCTTCGGATGCACAGATTGAAAAGATGGAGAAGG
AGCTGGCCAAGATGCGAGCCACGTTGGGCGAAAGCGTCCAACTGATGGAG
CAGCGCGAGATGAATACTAACATTGAGTATGAACAATTGACTCTCCGCGC
AAATGCGTTGCGTGAGGAGCTACACACCAATGTGGAGAGCATGCTGAACG
ATGTCATCCGTTTCAAGGTCCATATTCAAAAAGGTCTGGAAGACTACGAG
AGCTTTGTTGTCGACGAGGTCGAGCAGGAATTGGGTGGTGACATGCAGTT
TGCAGATGAGGACATTGAAATGGGAGTTGAAGAGGAAGAGGAGGAGCTTT
GA
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Coding sequence (CDS) from alignment at OGUI01000010.1:2253808..2256109+

>ATCC64974_69940-T1 ID=ATCC64974_69940-T1|Name=ATCC64974_69940-T1|organism=Aspergillus niger N402|type=CDS|length=4482bp|location=Sequence derived from alignment at OGUI01000010.1:2253808..2256109+ (Aspergillus niger N402)
ATGTCGCAGGATACAGGATTGTTCAGCATCAGGCGCACCCGCGAGTCTAT
GGCGATGGGTAGCCAAAATTACTCCGCTCTTCCGCAACCCTCCTCGGCCT
TGAAGCGCACCAGCTCCATTGGGTACCAGAATCCTCCTTTCACCTCTCAG
CACACGCGTATGTCGCTTCTCAACTCCGCCAGTCGCCCCCAACAGCCCAA
CTTTCAGCGTTCTTCTTCTGGTGGAGGCTTTGGTGCCGATGCCGGTCTCT
CATCAGTCAGACGCTCCGTCTCCAGTAATATGTTCCATGGTCCTAGTGTC
GGGCGCCCAAGCTTTGCTCCCGGGCCGATGTCGTCGCAAAGCACAGCAGG
GTCGCAAGGATTGCAACGGAGGAGTAGTGTCTTTTCACGACCATCTGTGG
GTGGCGCCATGGGTCATCATTCTTTCTTCACTCAAGTCCCGTCAGTTGCT
GGTGTCCCCAGGGACCCACGGCCACTCAGGGACAGGTCTTTCCAAGCTCG
TATTGGACAAGAGCTCTTGGAATATCTGACGCATAACAATTTTGAGCTTG
AGATGAAGCATTCACTGGGGCAGAACACCTTACGGTCTCCTACTCAAAAA
GATTTCAACTACATCTTCCAGTGGCTGTATCATCGCATTGATCCCGGGTA
CAAGTTTCAGAAGAGCATGGATGCGGAGGTACCACCTATTCTCAAGCAAC
TACGTTACCCCTACGAAAAGGGTATCACTAAGTCGCAGATTGCGGCTGTG
GGAGGCCAGAACTGGCCGACATTCCTCGGTATGCTGCATTGGTTGATGCA
ACTCGCTCAGATGATGGATCGATATTTGCTCGGGGAATACGATGAAGCTT
GCGCAGAGATGGGAGTCGATGTATCCGGCGACCGGATTATCTTCCGTTTC
CTTACAAGTGCCTACCATGACTGGCTGCAAGGCGGGGAAGATGAGGATGA
CGCAACAGCAGAGAAGAGACTAGTACCTCACGTCGAAATGATGGCCCAGG
AGTTTGAAAGAGGAAATGAAAAATATGTTCAAGAGATGGAGTCTTTGGAA
GCCGAAAACCGAGCGCTACGTGACCAGATTGAAGAGATGGAGAAGAACGC
TCCGGACATGGCCAAGCTAGACAAGCACTTCAGGATTTTGGAGGACGACA
AGAGGAAGTTTGAGGACTACAACCAGAATGTCCAGGGCAAGATCGAGAAA
TATGAGACCCGTATCAAATTCCTGGATGACGAGCTTAAGAAGACGGAGGA
TGACCTGCAAGCCGCCGAAGAGGAGCGGGCTGGGCTTCAGGCCAGTGTTG
ACCAACAAGGCCTGACAATCCAGGATATTGACCGTATGAACACGGAACGT
GAACGCCTGCAGAGGAATCTTGACGATACGGTCAATCGGTTGGAAGAAAC
GCACGCGCGGGTCATGGCAAAGGAGGCCGAGGCTAGTAGAAAACTCGAAG
ATTTAGAGGAGATCGTCAAGGTCTACAACACGCTCGGATACCAGAATAGT
TTGATTCCTTCGTCAGCTGTCAATGCCAAGGGCGACGATTACGAACTCAG
TCTCAACGTCAACGAGAGCAATTTCTCCGCCTCTCAGGTCGGTGGTCTAG
CGAACCGAATCTCTACCGATGGAGATCGACTATTGGCGGACCCGTTCACT
GGCTATCACCCAGCACACTTGCTCAACCTCGATCTCCGCGGCATCGTGCG
CAGCAATCTACAGGCTCTCCGGAAGGAGATCAACGAGCGCCGGAAGCGTG
CCATTGATGATGACTTGGAACGACGCAATCTCTTGGACAACATCAAGGAA
GCAATGGACGAGAAGCGAAGCGAGGTTGAGGCTTTGGAGCATAAGGCACG
TGCCGCTGAAGAGGAATTCGAGCGGCTCAAGGAGGTCACCACAACGCAGA
AGCTTGCTTCGGATGCACAGATTGAAAAGATGGAGAAGGAGCTGGCCAAG
ATGCGAGCCACGTTGGGCGAAAGCGTCCAACTGATGGAGCAGCGCGAGAT
GAATACTAACATTGAGTATGAACAATTGACTCTCCGCGCAAATGCGTTGC
GTGAGGAGCTACACACCAATGTGGAGAGCATGCTGAACGATGTCATCCGT
TTCAAGGTCCATATTCAAAAAGGTCTGGAAGACTACGAGAGCTTTGTTGT
CGACGAGGTCGAGCAGGAATTGGGTGGTGACATGCAGTTTGCAGATGAGG
ACATTGAAATGGGAGTTGAAGAGGAAGAGGAGGAGCTTTGAATGTCGCAG
GATACAGGATTGTTCAGCATCAGGCGCACCCGCGAGTCTATGGCGATGGG
TAGCCAAAATTACTCCGCTCTTCCGCAACCCTCCTCGGCCTTGAAGCGCA
CCAGCTCCATTGGGTACCAGAATCCTCCTTTCACCTCTCAGCACACGCGT
ATGTCGCTTCTCAACTCCGCCAGTCGCCCCCAACAGCCCAACTTTCAGCG
TTCTTCTTCTGGTGGAGGCTTTGGTGCCGATGCCGGTCTCTCATCAGTCA
GACGCTCCGTCTCCAGTAATATGTTCCATGGTCCTAGTGTCGGGCGCCCA
AGCTTTGCTCCCGGGCCGATGTCGTCGCAAAGCACAGCAGGGTCGCAAGG
ATTGCAACGGAGGAGTAGTGTCTTTTCACGACCATCTGTGGGTGGCGCCA
TGGGTCATCATTCTTTCTTCACTCAAGTCCCGTCAGTTGCTGGTGTCCCC
AGGGACCCACGGCCACTCAGGGACAGGTCTTTCCAAGCTCGTATTGGACA
AGAGCTCTTGGAATATCTGACGCATAACAATTTTGAGCTTGAGATGAAGC
ATTCACTGGGGCAGAACACCTTACGGTCTCCTACTCAAAAAGATTTCAAC
TACATCTTCCAGTGGCTGTATCATCGCATTGATCCCGGGTACAAGTTTCA
GAAGAGCATGGATGCGGAGGTACCACCTATTCTCAAGCAACTACGTTACC
CCTACGAAAAGGGTATCACTAAGTCGCAGATTGCGGCTGTGGGAGGCCAG
AACTGGCCGACATTCCTCGGTATGCTGCATTGGTTGATGCAACTCGCTCA
GATGATGGATCGATATTTGCTCGGGGAATACGATGAAGCTTGCGCAGAGA
TGGGAGTCGATGTATCCGGCGACCGGATTATCTTCCGTTTCCTTACAAGT
GCCTACCATGACTGGCTGCAAGGCGGGGAAGATGAGGATGACGCAACAGC
AGAGAAGAGACTAGTACCTCACGTCGAAATGATGGCCCAGGAGTTTGAAA
GAGGAAATGAAAAATATGTTCAAGAGATGGAGTCTTTGGAAGCCGAAAAC
CGAGCGCTACGTGACCAGATTGAAGAGATGGAGAAGAACGCTCCGGACAT
GGCCAAGCTAGACAAGCACTTCAGGATTTTGGAGGACGACAAGAGGAAGT
TTGAGGACTACAACCAGAATGTCCAGGGCAAGATCGAGAAATATGAGACC
CGTATCAAATTCCTGGATGACGAGCTTAAGAAGACGGAGGATGACCTGCA
AGCCGCCGAAGAGGAGCGGGCTGGGCTTCAGGCCAGTGTTGACCAACAAG
GCCTGACAATCCAGGATATTGACCGTATGAACACGGAACGTGAACGCCTG
CAGAGGAATCTTGACGATACGGTCAATCGGTTGGAAGAAACGCACGCGCG
GGTCATGGCAAAGGAGGCCGAGGCTAGTAGAAAACTCGAAGATTTAGAGG
AGATCGTCAAGGTCTACAACACGCTCGGATACCAGAATAGTTTGATTCCT
TCGTCAGCTGTCAATGCCAAGGGCGACGATTACGAACTCAGTCTCAACGT
CAACGAGAGCAATTTCTCCGCCTCTCAGGTCGGTGGTCTAGCGAACCGAA
TCTCTACCGATGGAGATCGACTATTGGCGGACCCGTTCACTGGCTATCAC
CCAGCACACTTGCTCAACCTCGATCTCCGCGGCATCGTGCGCAGCAATCT
ACAGGCTCTCCGGAAGGAGATCAACGAGCGCCGGAAGCGTGCCATTGATG
ATGACTTGGAACGACGCAATCTCTTGGACAACATCAAGGAAGCAATGGAC
GAGAAGCGAAGCGAGGTTGAGGCTTTGGAGCATAAGGCACGTGCCGCTGA
AGAGGAATTCGAGCGGCTCAAGGAGGTCACCACAACGCAGAAGCTTGCTT
CGGATGCACAGATTGAAAAGATGGAGAAGGAGCTGGCCAAGATGCGAGCC
ACGTTGGGCGAAAGCGTCCAACTGATGGAGCAGCGCGAGATGAATACTAA
CATTGAGTATGAACAATTGACTCTCCGCGCAAATGCGTTGCGTGAGGAGC
TACACACCAATGTGGAGAGCATGCTGAACGATGTCATCCGTTTCAAGGTC
CATATTCAAAAAGGTCTGGAAGACTACGAGAGCTTTGTTGTCGACGAGGT
CGAGCAGGAATTGGGTGGTGACATGCAGTTTGCAGATGAGGACATTGAAA
TGGGAGTTGAAGAGGAAGAGGAGGAGCTTTGA
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Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Cellular Component
TermDefinition
GO:0031262Ndc80 complex
Vocabulary: Biological Process
TermDefinition
GO:0051315attachment of mitotic spindle microtubules to kinetochore
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
NDC80ATCC64974_69940Aspergillus niger N402gene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ATCC64974_69940-T1.exon1ATCC64974_69940-T1.exon1Aspergillus niger N402exon
ATCC64974_69940-T1.exon2ATCC64974_69940-T1.exon2Aspergillus niger N402exon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ATCC64974_69940-T1.cdsATCC64974_69940-T1.cdsAspergillus niger N402CDS


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
ATCC64974_69940-T1ATCC64974_69940-T1-proteinAspergillus niger N402polypeptide


Properties
Property NameValue
NoteBUSCO:EOG092619RJ
DBxrefInterPro:IPR038273
DBxrefInterPro:IPR005550
DBxrefPFAM:PF03801
Productkinetochore-associated Ndc80 complex subunit ndc80
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger N402 whole genome analysis2021-11-01
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
OGUI01000010.1supercontigOGUI01000010.1:2253808..2256109 +
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