You are here

Home

ATCC64974_70190-T1, ATCC64974_70190-T1 (mRNA) Aspergillus niger N402

Overview
NameATCC64974_70190-T1
Unique NameATCC64974_70190-T1
TypemRNA
OrganismAspergillus niger N402
Sequences
The following sequences are available for this feature:

mRNA from alignment at OGUI01000010.1:2341189..2342148+

Legend: exonpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>ATCC64974_70190-T1 ID=ATCC64974_70190-T1|Name=ATCC64974_70190-T1|organism=Aspergillus niger N402|type=mRNA|length=960bp|location=Sequence derived from alignment at OGUI01000010.1:2341189..2342148+ (Aspergillus niger N402)
ATGTCGATCTCTTCTCTTCGAGGCCTTCTTACCAACTACTCCCCCGTTTC
AGAGGAATTCACCCAACCCGATCTGGAAAAGGAGTTGCACGTTTCCCTTC
GAAATGGCGACGACAGCGAGTCCTCCTCATCCCGGTCAGTCTGCCGGGAA
AAAGCGGAGAAGAAGGAGTCCAAAATCGTTGACGGACGTATCGTCTCCGA
CGCTATCATCGGTCTCTCCGACGGCATGACGGTTCCATTTGCCCTGACCG
CAGGCTTATCTGCTCTGGGAGACACCAAGGTCGTGGTTTTTGGCGGCATG
GCCGAACTCATTGCAGGAGCCATCTCCATGGGATTGGGAGGCTACTTGGG
TGCGAAGAGCGAAGAGTGAGTAGTTTTCAAACTTCCCCAAGTATACAAAA
TTAGCAAAAGAAATATGCTGACCAGTTTTAGGGAGTCCTACCGCGCAACC
CTGAAGGAAACAAAGCAAGAGATTCTAACCGACCCCGCATCGGTGACTGA
GACGATCTCGGATGTCTTTGCGCCCTATGACCTCCCCGCAGAGCTGGTGG
GAGAGCTCACGCGACACCTCTCCTCATCCCCTAACCTCCCCTCCTTCCTC
ATGAACTTCCATCACACCGTCCAGGAACCCTCTGGCTCTCGTGCCTTCAT
CTGTGCCTTGACCATTGCATTGGGATACTTCATCGGTGGCTTCGTGCCAC
TCCTCCCCTACTTCTTCGTTGGGCCCCATGATGTACTCTCTGCCCTGCGC
TGGTCAATCGCCACGATGGCCGTTGCTTTGTTCTTGTTCGGTTACGGCAA
GACGTGCTTCGTCAGCGGATGGAAAGGATATCGGAACATCAGACGCGGTG
TCATTGGCGGCTTGCAGATGGTTCTAGTCGGAGGCGTTGCAGCAGGCTCT
GCAATGGGGCTGGTGAAGGGGTTCCAAATGCTGGCTGACTCTCATAGTCA
TGAGCATTAG
back to top

Coding sequence (CDS) from alignment at OGUI01000010.1:2341189..2342148+

>ATCC64974_70190-T1 ID=ATCC64974_70190-T1|Name=ATCC64974_70190-T1|organism=Aspergillus niger N402|type=CDS|length=1788bp|location=Sequence derived from alignment at OGUI01000010.1:2341189..2342148+ (Aspergillus niger N402)
ATGTCGATCTCTTCTCTTCGAGGCCTTCTTACCAACTACTCCCCCGTTTC
AGAGGAATTCACCCAACCCGATCTGGAAAAGGAGTTGCACGTTTCCCTTC
GAAATGGCGACGACAGCGAGTCCTCCTCATCCCGGTCAGTCTGCCGGGAA
AAAGCGGAGAAGAAGGAGTCCAAAATCGTTGACGGACGTATCGTCTCCGA
CGCTATCATCGGTCTCTCCGACGGCATGACGGTTCCATTTGCCCTGACCG
CAGGCTTATCTGCTCTGGGAGACACCAAGGTCGTGGTTTTTGGCGGCATG
GCCGAACTCATTGCAGGAGCCATCTCCATGGGATTGGGAGGCTACTTGGG
TGCGAAGAGCGAAGAGGAGTCCTACCGCGCAACCCTGAAGGAAACAAAGC
AAGAGATTCTAACCGACCCCGCATCGGTGACTGAGACGATCTCGGATGTC
TTTGCGCCCTATGACCTCCCCGCAGAGCTGGTGGGAGAGCTCACGCGACA
CCTCTCCTCATCCCCTAACCTCCCCTCCTTCCTCATGAACTTCCATCACA
CCGTCCAGGAACCCTCTGGCTCTCGTGCCTTCATCTGTGCCTTGACCATT
GCATTGGGATACTTCATCGGTGGCTTCGTGCCACTCCTCCCCTACTTCTT
CGTTGGGCCCCATGATGTACTCTCTGCCCTGCGCTGGTCAATCGCCACGA
TGGCCGTTGCTTTGTTCTTGTTCGGTTACGGCAAGACGTGCTTCGTCAGC
GGATGGAAAGGATATCGGAACATCAGACGCGGTGTCATTGGCGGCTTGCA
GATGGTTCTAGTCGGAGGCGTTGCAGCAGGCTCTGCAATGGGGCTGGTGA
AGGGGTTCCAAATGCTGGCTGACTCTCATAGTCATGAGCATTAGATGTCG
ATCTCTTCTCTTCGAGGCCTTCTTACCAACTACTCCCCCGTTTCAGAGGA
ATTCACCCAACCCGATCTGGAAAAGGAGTTGCACGTTTCCCTTCGAAATG
GCGACGACAGCGAGTCCTCCTCATCCCGGTCAGTCTGCCGGGAAAAAGCG
GAGAAGAAGGAGTCCAAAATCGTTGACGGACGTATCGTCTCCGACGCTAT
CATCGGTCTCTCCGACGGCATGACGGTTCCATTTGCCCTGACCGCAGGCT
TATCTGCTCTGGGAGACACCAAGGTCGTGGTTTTTGGCGGCATGGCCGAA
CTCATTGCAGGAGCCATCTCCATGGGATTGGGAGGCTACTTGGGTGCGAA
GAGCGAAGAGGAGTCCTACCGCGCAACCCTGAAGGAAACAAAGCAAGAGA
TTCTAACCGACCCCGCATCGGTGACTGAGACGATCTCGGATGTCTTTGCG
CCCTATGACCTCCCCGCAGAGCTGGTGGGAGAGCTCACGCGACACCTCTC
CTCATCCCCTAACCTCCCCTCCTTCCTCATGAACTTCCATCACACCGTCC
AGGAACCCTCTGGCTCTCGTGCCTTCATCTGTGCCTTGACCATTGCATTG
GGATACTTCATCGGTGGCTTCGTGCCACTCCTCCCCTACTTCTTCGTTGG
GCCCCATGATGTACTCTCTGCCCTGCGCTGGTCAATCGCCACGATGGCCG
TTGCTTTGTTCTTGTTCGGTTACGGCAAGACGTGCTTCGTCAGCGGATGG
AAAGGATATCGGAACATCAGACGCGGTGTCATTGGCGGCTTGCAGATGGT
TCTAGTCGGAGGCGTTGCAGCAGGCTCTGCAATGGGGCTGGTGAAGGGGT
TCCAAATGCTGGCTGACTCTCATAGTCATGAGCATTAG
back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Biological Process
TermDefinition
GO:0030026cellular manganese ion homeostasis
Vocabulary: Molecular Function
TermDefinition
GO:0005384manganese ion transmembrane transporter activity
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
ATCC64974_70190ATCC64974_70190Aspergillus niger N402gene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ATCC64974_70190-T1.exon1ATCC64974_70190-T1.exon1Aspergillus niger N402exon
ATCC64974_70190-T1.exon2ATCC64974_70190-T1.exon2Aspergillus niger N402exon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ATCC64974_70190-T1.cdsATCC64974_70190-T1.cdsAspergillus niger N402CDS


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
ATCC64974_70190-T1ATCC64974_70190-T1-proteinAspergillus niger N402polypeptide


Properties
Property NameValue
NoteEggNog:ENOG41
DBxrefInterPro:IPR008217
DBxrefPFAM:PF01988
Producthypothetical protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger N402 whole genome analysis2021-11-01
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
OGUI01000010.1supercontigOGUI01000010.1:2341189..2342148 +
Powered by Drupal