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ATCC64974_70300-T1, ATCC64974_70300-T1 (mRNA) Aspergillus niger N402

Overview
NameATCC64974_70300-T1
Unique NameATCC64974_70300-T1
TypemRNA
OrganismAspergillus niger N402
Sequences
The following sequences are available for this feature:

mRNA from alignment at OGUI01000010.1:2375802..2378150-

Legend: CDSpolypeptideexon
Hold the cursor over a type above to highlight its positions in the sequence below.
>ATCC64974_70300-T1 ID=ATCC64974_70300-T1|Name=ATCC64974_70300-T1|organism=Aspergillus niger N402|type=mRNA|length=2349bp|location=Sequence derived from alignment at OGUI01000010.1:2375802..2378150- (Aspergillus niger N402)
ATGGATTCCACAGCGGATTTTGGCTCGTTACAGCAACGGGTGCAGTCGTC
CCTGATGCAGGTGACGCGCACTGCCGGTCAACTTTCAGCCGAAGATCTCG
ATTTCCATCGCACCTCTAACGCAGAGGTTTCTGATTCCCTGGACGAGCAG
AGCAACCGACTCTTGTCGCTCACTTCTTCTATTTTGAAAGCCGCCACCGC
CGGAACCGATGTTTCTGCACCGACCTTAGACGACGAAGATTCCCTCGAAG
ATAATTGGCGCGGCGTCGTGGATGTCATCGATGCGCTATTGGAAAAGGCC
GACGCATGCTTGGATGAATTCACCGGTGTTATTAAGAAATTGAGCCCGTC
GCAACAGGATCAAGCTGCCGCTGCCGCTGCGAAGGCTTCGAAGAAGCAAC
CCGCTAAATTCCCGACCATTTACGACTACGGCCCGTCGAAGATCCCGAAG
CCGCAATTGCTGTTCGAACGCAAGGCCGATAACACCGATACCGCGCCTTT
CAAGCCTTTGCTTAAGACGAAGCCTCATGCCGTTGTTCCGCTGAAAGACT
CGTTAAAGTTGTCCGATTCCGCTGTCGGATATGTCAACCCGTACGAGAAG
GAGATTCGTGCCGCAAAGTTCCCCACTTCTTCCTACAGCGTGTCGCCGCC
TGTGGATTATCAGCCGTGGGAGTCGACAAAGGCGACTTTTGTGGATACTC
TGGAGGGAGTGAAGGAGATGTTGGAGGAACTTAAGGCCGCGAAGGAGATC
GCGATTGATTTGGAGCATCACGATGTGCACTCGTATCAGGGTCTTGTCTC
CTTGATGCAGATCAGCACTCGGGATAAGGATTGGGTTGTTGATACGCTTA
AGCCGTGGAGGGAGGAGCTGCAAGTTCTTAACGAAGTGTTCACGGATCCC
AACATCTTGAAGGTGCTTCACGGTTCCTCGATGGATATTATCTGGCTTCA
GCGCGACTTGGGGCTGTACGTCGTTGGCATGTTCGATACATACCATGCTG
CTTGCGCGTTGAACTACCCCAAGCGCAGTTTGAAGTTCCTGCTGCAGAAG
TTTGTCAACTTCGAAGCCGATAAACGTTACCAGATGGCCGACTGGCGCAT
TCGACCGATCCCGGAAGGCATGTTCGATTACGCTCGTTCGGATACTCACT
ACCTTCTTCACATCTACGACCACATTCGCAACGAACTTGTCGAAAACTCC
CTCCCCGACAACAACCTTATCGACTACGTCCTGGAGCAGTCTAAGAAGGA
AGCTCTGCAAGTATATGAGCGTCCTGTTTACGATGCTGCTACTGGTCAAG
GACCGGGTGGTTGGTACGACCTCCTTTCTCGCAATTCGGTCGTGGTCAAC
AGGGAACAGTTTGCCGTATTCAAAGCAGTACATCAGTGGCGTGACGAGGT
TGCTAGAGAGGAAGACGAGGGCGTGCAATGCGTGTTCCCGAAACACGTTC
TCTTCAGGGTTGCTCACACTATGCCGCTCGACTTGGGCACCCTGTTCCGG
ACATTGTCACCTGTGACACCAATTGTCCAAAACCGCGCTGTAGACCTTTT
GGAAGTCATCAAGAAGGCTAAGGATGAGGGCGCTGATGGCCCTGAATGGC
GTGACGTCTACGTCAAGCCAACCAGGGGTACACCGGCCGCGCCGGCGACA
CAGCCAGTCGATGTCCCGTCCCCGACCCCAGCAGACGAGGCCAATCTCCC
CACTGTTTCTCGCTACGAGGTCTCCCAATTCTGGGGTTCCGTGTTGGAGT
CACAAGAACCTCCCACGGTCCCTGCATACTCCGCCGTTGCTTCAGCCGAA
GCTCTCCGTCTCTCCCTCCCCCTTCCGCCTATGCCTAAAACCGTCTCCGA
AGCCCGCGAAAAGCTCGCACCCGCTCAACCTCAAACCCCGAAACCCGCTA
CCTCTGCACCCGCCGTTAAGGAAGAGAAGAAAGAGGACGAGAACAAGTAC
TTCACCGTCAAGGAAATGGGTGGACCACGTAAGCGCAAGGCCGCCCCCGC
AGAGACGGCCGAGCAATTGCAGTCCGCCTCATCGGATTTCGACACCACTG
ACGCCAGTTCCTCGTTGGACACTGAAGATAAGCCATCCAAGAAACAGCGC
CGCAAGGAGAAGAAGAACAAGCCCGCAGCACAACCCGAGACAGCTGCCGA
GGAGGACGGAGAAGAGGAGGAAGAGGAGGCTCCCTTCAACTACGAGTCCG
CTGCCTCTGTATTCAATGCCAACCCCAAGGCTACTTCGGGACTCCCGTCC
AGGCGTCGTTATAATCCCTATGCTAAGGTGCTCGATGCCCCGTCGGGAGT
GCGGAAGCAGAAACGCGAGACTGCCGGAAAGGCGTTTACGTTCCGGTGA
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Coding sequence (CDS) from alignment at OGUI01000010.1:2375802..2378150-

>ATCC64974_70300-T1 ID=ATCC64974_70300-T1|Name=ATCC64974_70300-T1|organism=Aspergillus niger N402|type=CDS|length=2349bp|location=Sequence derived from alignment at OGUI01000010.1:2375802..2378150- (Aspergillus niger N402)
ATGGATTCCACAGCGGATTTTGGCTCGTTACAGCAACGGGTGCAGTCGTC
CCTGATGCAGGTGACGCGCACTGCCGGTCAACTTTCAGCCGAAGATCTCG
ATTTCCATCGCACCTCTAACGCAGAGGTTTCTGATTCCCTGGACGAGCAG
AGCAACCGACTCTTGTCGCTCACTTCTTCTATTTTGAAAGCCGCCACCGC
CGGAACCGATGTTTCTGCACCGACCTTAGACGACGAAGATTCCCTCGAAG
ATAATTGGCGCGGCGTCGTGGATGTCATCGATGCGCTATTGGAAAAGGCC
GACGCATGCTTGGATGAATTCACCGGTGTTATTAAGAAATTGAGCCCGTC
GCAACAGGATCAAGCTGCCGCTGCCGCTGCGAAGGCTTCGAAGAAGCAAC
CCGCTAAATTCCCGACCATTTACGACTACGGCCCGTCGAAGATCCCGAAG
CCGCAATTGCTGTTCGAACGCAAGGCCGATAACACCGATACCGCGCCTTT
CAAGCCTTTGCTTAAGACGAAGCCTCATGCCGTTGTTCCGCTGAAAGACT
CGTTAAAGTTGTCCGATTCCGCTGTCGGATATGTCAACCCGTACGAGAAG
GAGATTCGTGCCGCAAAGTTCCCCACTTCTTCCTACAGCGTGTCGCCGCC
TGTGGATTATCAGCCGTGGGAGTCGACAAAGGCGACTTTTGTGGATACTC
TGGAGGGAGTGAAGGAGATGTTGGAGGAACTTAAGGCCGCGAAGGAGATC
GCGATTGATTTGGAGCATCACGATGTGCACTCGTATCAGGGTCTTGTCTC
CTTGATGCAGATCAGCACTCGGGATAAGGATTGGGTTGTTGATACGCTTA
AGCCGTGGAGGGAGGAGCTGCAAGTTCTTAACGAAGTGTTCACGGATCCC
AACATCTTGAAGGTGCTTCACGGTTCCTCGATGGATATTATCTGGCTTCA
GCGCGACTTGGGGCTGTACGTCGTTGGCATGTTCGATACATACCATGCTG
CTTGCGCGTTGAACTACCCCAAGCGCAGTTTGAAGTTCCTGCTGCAGAAG
TTTGTCAACTTCGAAGCCGATAAACGTTACCAGATGGCCGACTGGCGCAT
TCGACCGATCCCGGAAGGCATGTTCGATTACGCTCGTTCGGATACTCACT
ACCTTCTTCACATCTACGACCACATTCGCAACGAACTTGTCGAAAACTCC
CTCCCCGACAACAACCTTATCGACTACGTCCTGGAGCAGTCTAAGAAGGA
AGCTCTGCAAGTATATGAGCGTCCTGTTTACGATGCTGCTACTGGTCAAG
GACCGGGTGGTTGGTACGACCTCCTTTCTCGCAATTCGGTCGTGGTCAAC
AGGGAACAGTTTGCCGTATTCAAAGCAGTACATCAGTGGCGTGACGAGGT
TGCTAGAGAGGAAGACGAGGGCGTGCAATGCGTGTTCCCGAAACACGTTC
TCTTCAGGGTTGCTCACACTATGCCGCTCGACTTGGGCACCCTGTTCCGG
ACATTGTCACCTGTGACACCAATTGTCCAAAACCGCGCTGTAGACCTTTT
GGAAGTCATCAAGAAGGCTAAGGATGAGGGCGCTGATGGCCCTGAATGGC
GTGACGTCTACGTCAAGCCAACCAGGGGTACACCGGCCGCGCCGGCGACA
CAGCCAGTCGATGTCCCGTCCCCGACCCCAGCAGACGAGGCCAATCTCCC
CACTGTTTCTCGCTACGAGGTCTCCCAATTCTGGGGTTCCGTGTTGGAGT
CACAAGAACCTCCCACGGTCCCTGCATACTCCGCCGTTGCTTCAGCCGAA
GCTCTCCGTCTCTCCCTCCCCCTTCCGCCTATGCCTAAAACCGTCTCCGA
AGCCCGCGAAAAGCTCGCACCCGCTCAACCTCAAACCCCGAAACCCGCTA
CCTCTGCACCCGCCGTTAAGGAAGAGAAGAAAGAGGACGAGAACAAGTAC
TTCACCGTCAAGGAAATGGGTGGACCACGTAAGCGCAAGGCCGCCCCCGC
AGAGACGGCCGAGCAATTGCAGTCCGCCTCATCGGATTTCGACACCACTG
ACGCCAGTTCCTCGTTGGACACTGAAGATAAGCCATCCAAGAAACAGCGC
CGCAAGGAGAAGAAGAACAAGCCCGCAGCACAACCCGAGACAGCTGCCGA
GGAGGACGGAGAAGAGGAGGAAGAGGAGGCTCCCTTCAACTACGAGTCCG
CTGCCTCTGTATTCAATGCCAACCCCAAGGCTACTTCGGGACTCCCGTCC
AGGCGTCGTTATAATCCCTATGCTAAGGTGCTCGATGCCCCGTCGGGAGT
GCGGAAGCAGAAACGCGAGACTGCCGGAAAGGCGTTTACGTTCCGGTGA
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Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Cellular Component
TermDefinition
GO:0000176nuclear exosome (RNase complex)
Vocabulary: Biological Process
TermDefinition
GO:0044237cellular metabolic process
GO:0006396RNA processing
GO:0006139nucleobase-containing compound metabolic process
Vocabulary: Molecular Function
TermDefinition
GO:0000166nucleotide binding
GO:0003824catalytic activity
GO:00084083'-5' exonuclease activity
GO:0003676nucleic acid binding
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
ATCC64974_70300ATCC64974_70300Aspergillus niger N402gene


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ATCC64974_70300-T1.cdsATCC64974_70300-T1.cdsAspergillus niger N402CDS


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ATCC64974_70300-T1.exon1ATCC64974_70300-T1.exon1Aspergillus niger N402exon


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
ATCC64974_70300-T1ATCC64974_70300-T1-proteinAspergillus niger N402polypeptide


Properties
Property NameValue
NoteBUSCO:EOG0926158Y
DBxrefInterPro:IPR012337
DBxrefInterPro:IPR010997
DBxrefInterPro:IPR012588
DBxrefInterPro:IPR002562
DBxrefInterPro:IPR002121
DBxrefPFAM:PF08066
DBxrefPFAM:PF00570
DBxrefPFAM:PF01612
Producthypothetical protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger N402 whole genome analysis2021-11-01
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
OGUI01000010.1supercontigOGUI01000010.1:2375802..2378150 -
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