You are here

Home

ATCC64974_71640-T1, ATCC64974_71640-T1 (mRNA) Aspergillus niger N402

Overview
NameATCC64974_71640-T1
Unique NameATCC64974_71640-T1
TypemRNA
OrganismAspergillus niger N402
Sequences
The following sequences are available for this feature:

mRNA from alignment at OGUI01000011.1:68760..70174+

Legend: exonpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>ATCC64974_71640-T1 ID=ATCC64974_71640-T1|Name=ATCC64974_71640-T1|organism=Aspergillus niger N402|type=mRNA|length=1415bp|location=Sequence derived from alignment at OGUI01000011.1:68760..70174+ (Aspergillus niger N402)
ATGTTGATGAAGCAGTTCCGGTCATCAACCACTTTTGCAGTTTTGGTGGT
CTGTGTGGCAGTCTTCACTGATATCTTTCTCTATGGACTAGTCGTACCCA
TGCTTCCCTTTGCCCTCGCCGAGCGTGTGGGCCTCACTGATGCCGATATT
CAGCATTGGAATTCCATCTTACTTGCCAGCTACGGGGCGTCCATCATGCT
GGGGTCATGTGAGCTATTCATTATTAGCCGGACTGACCCTTACCACAGAC
ACCTCCTTACTCATTCATGGTTACAGTGCTTTTTGGATGGATGGGCGATC
GAACCCGCACGAAGCAGCTACCATTTTTGCTCGGGGTCGGGGTTATGGGA
GGTGCGACACTGCTCTTCTCACTTACCAGATCATTGGCCGTGATCCTTCT
CGCTCGAATCCTGCAGGGCTGTTCGACTGCCATAGTATTTACAATTGGAT
TTAGTCTAATGCTGGACACAGTTGGGGAGCAACACATTGGACGTGCCATC
GGCTTTACGAGCATGAGCCTCAGCGTTGGTTTATTCGCAGGACCCATCGT
GGGTGGTTTTTTGTACGACCTGGCTGGATACTTCGCTGTCTTTGTCCCAG
CCTTTGTGCTTGTCGTACTGGAGTTTGTCCTTCGGGTGCTTCTCATCAGG
CCGTCGCTGAAAACTGATAACAAGCGAAACCTCACCGAGGAGGAGAGACG
TCCATTGATGACGGATGCCGCGGGAACTCCCACCACAGTGTCGCCAAGGA
AGCCTGCACTTTTATACTTGCTATGCATGCCTAGGTTCATTACCGCGATG
ACGGGAATGTTCATGCTGAACTCGTTCATGACTGCCTTGGAGGCTGTGCT
ACCTGTGTATCTCCCTCAAGTTTTCCCTTACCGGTCGACGGAGATCGCCA
TTGTATTTCTGTCCAATACACTGCCCATGATTTGCTCTCCAATCGGCGGA
GCTGTGGTAGATCGCATGGGTCCGTTCTGGCCGGCGGTCCTCGGATTTAC
CTTGATTACCCCTAGCATGATGTTACTGTCGCTGGTCCGTGAGCCGGAAA
TGATCATGTCTGTGCTGCTTCGACTGTTCTTGTTCCTGTTCGGCTGTGGG
GTATCTCTTGCCATGCCTGCCATGATGACAGAAATTACACTAGCCAAAGA
CGACATGGAGGATGGATATCCGGGAATCTTTGGAGATGGAGGCGCCTCTT
CACAGGCTTACGGTCTGAGTAATGCTGCGTTTGCTGCAGGGACACTGGTT
GGGCCTTTGTATGCTGGATATATTCGAGAGAGTGTGAGTTGGAGTGCAAT
GGTTATTTCCTTGGGAGCCTTCAGTGCCTTGATGGTAGTCTTCGTTGTTG
CATTTACTCCGCTGAAAGGTCGCGTGTTACACGGGAGCCGGGTGCCTGAT
TCAACAAGGCAATGA
back to top

Coding sequence (CDS) from alignment at OGUI01000011.1:68760..70174+

>ATCC64974_71640-T1 ID=ATCC64974_71640-T1|Name=ATCC64974_71640-T1|organism=Aspergillus niger N402|type=CDS|length=2694bp|location=Sequence derived from alignment at OGUI01000011.1:68760..70174+ (Aspergillus niger N402)
ATGTTGATGAAGCAGTTCCGGTCATCAACCACTTTTGCAGTTTTGGTGGT
CTGTGTGGCAGTCTTCACTGATATCTTTCTCTATGGACTAGTCGTACCCA
TGCTTCCCTTTGCCCTCGCCGAGCGTGTGGGCCTCACTGATGCCGATATT
CAGCATTGGAATTCCATCTTACTTGCCAGCTACGGGGCGTCCATCATGCT
GGGGTCATTGCTTTTTGGATGGATGGGCGATCGAACCCGCACGAAGCAGC
TACCATTTTTGCTCGGGGTCGGGGTTATGGGAGGTGCGACACTGCTCTTC
TCACTTACCAGATCATTGGCCGTGATCCTTCTCGCTCGAATCCTGCAGGG
CTGTTCGACTGCCATAGTATTTACAATTGGATTTAGTCTAATGCTGGACA
CAGTTGGGGAGCAACACATTGGACGTGCCATCGGCTTTACGAGCATGAGC
CTCAGCGTTGGTTTATTCGCAGGACCCATCGTGGGTGGTTTTTTGTACGA
CCTGGCTGGATACTTCGCTGTCTTTGTCCCAGCCTTTGTGCTTGTCGTAC
TGGAGTTTGTCCTTCGGGTGCTTCTCATCAGGCCGTCGCTGAAAACTGAT
AACAAGCGAAACCTCACCGAGGAGGAGAGACGTCCATTGATGACGGATGC
CGCGGGAACTCCCACCACAGTGTCGCCAAGGAAGCCTGCACTTTTATACT
TGCTATGCATGCCTAGGTTCATTACCGCGATGACGGGAATGTTCATGCTG
AACTCGTTCATGACTGCCTTGGAGGCTGTGCTACCTGTGTATCTCCCTCA
AGTTTTCCCTTACCGGTCGACGGAGATCGCCATTGTATTTCTGTCCAATA
CACTGCCCATGATTTGCTCTCCAATCGGCGGAGCTGTGGTAGATCGCATG
GGTCCGTTCTGGCCGGCGGTCCTCGGATTTACCTTGATTACCCCTAGCAT
GATGTTACTGTCGCTGGTCCGTGAGCCGGAAATGATCATGTCTGTGCTGC
TTCGACTGTTCTTGTTCCTGTTCGGCTGTGGGGTATCTCTTGCCATGCCT
GCCATGATGACAGAAATTACACTAGCCAAAGACGACATGGAGGATGGATA
TCCGGGAATCTTTGGAGATGGAGGCGCCTCTTCACAGGCTTACGGTCTGA
GTAATGCTGCGTTTGCTGCAGGGACACTGGTTGGGCCTTTGTATGCTGGA
TATATTCGAGAGAGTGTGAGTTGGAGTGCAATGGTTATTTCCTTGGGAGC
CTTCAGTGCCTTGATGGTAGTCTTCGTTGTTGCATTTACTCCGCTGAAAG
GTCGCGTGTTACACGGGAGCCGGGTGCCTGATTCAACAAGGCAATGAATG
TTGATGAAGCAGTTCCGGTCATCAACCACTTTTGCAGTTTTGGTGGTCTG
TGTGGCAGTCTTCACTGATATCTTTCTCTATGGACTAGTCGTACCCATGC
TTCCCTTTGCCCTCGCCGAGCGTGTGGGCCTCACTGATGCCGATATTCAG
CATTGGAATTCCATCTTACTTGCCAGCTACGGGGCGTCCATCATGCTGGG
GTCATTGCTTTTTGGATGGATGGGCGATCGAACCCGCACGAAGCAGCTAC
CATTTTTGCTCGGGGTCGGGGTTATGGGAGGTGCGACACTGCTCTTCTCA
CTTACCAGATCATTGGCCGTGATCCTTCTCGCTCGAATCCTGCAGGGCTG
TTCGACTGCCATAGTATTTACAATTGGATTTAGTCTAATGCTGGACACAG
TTGGGGAGCAACACATTGGACGTGCCATCGGCTTTACGAGCATGAGCCTC
AGCGTTGGTTTATTCGCAGGACCCATCGTGGGTGGTTTTTTGTACGACCT
GGCTGGATACTTCGCTGTCTTTGTCCCAGCCTTTGTGCTTGTCGTACTGG
AGTTTGTCCTTCGGGTGCTTCTCATCAGGCCGTCGCTGAAAACTGATAAC
AAGCGAAACCTCACCGAGGAGGAGAGACGTCCATTGATGACGGATGCCGC
GGGAACTCCCACCACAGTGTCGCCAAGGAAGCCTGCACTTTTATACTTGC
TATGCATGCCTAGGTTCATTACCGCGATGACGGGAATGTTCATGCTGAAC
TCGTTCATGACTGCCTTGGAGGCTGTGCTACCTGTGTATCTCCCTCAAGT
TTTCCCTTACCGGTCGACGGAGATCGCCATTGTATTTCTGTCCAATACAC
TGCCCATGATTTGCTCTCCAATCGGCGGAGCTGTGGTAGATCGCATGGGT
CCGTTCTGGCCGGCGGTCCTCGGATTTACCTTGATTACCCCTAGCATGAT
GTTACTGTCGCTGGTCCGTGAGCCGGAAATGATCATGTCTGTGCTGCTTC
GACTGTTCTTGTTCCTGTTCGGCTGTGGGGTATCTCTTGCCATGCCTGCC
ATGATGACAGAAATTACACTAGCCAAAGACGACATGGAGGATGGATATCC
GGGAATCTTTGGAGATGGAGGCGCCTCTTCACAGGCTTACGGTCTGAGTA
ATGCTGCGTTTGCTGCAGGGACACTGGTTGGGCCTTTGTATGCTGGATAT
ATTCGAGAGAGTGTGAGTTGGAGTGCAATGGTTATTTCCTTGGGAGCCTT
CAGTGCCTTGATGGTAGTCTTCGTTGTTGCATTTACTCCGCTGAAAGGTC
GCGTGTTACACGGGAGCCGGGTGCCTGATTCAACAAGGCAATGA
back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Cellular Component
TermDefinition
GO:0005887integral component of plasma membrane
Vocabulary: Biological Process
TermDefinition
GO:0055085transmembrane transport
Vocabulary: Molecular Function
TermDefinition
GO:0022857transmembrane transporter activity
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
ATCC64974_71640ATCC64974_71640Aspergillus niger N402gene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ATCC64974_71640-T1.exon1ATCC64974_71640-T1.exon1Aspergillus niger N402exon
ATCC64974_71640-T1.exon2ATCC64974_71640-T1.exon2Aspergillus niger N402exon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ATCC64974_71640-T1.cdsATCC64974_71640-T1.cdsAspergillus niger N402CDS


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
ATCC64974_71640-T1ATCC64974_71640-T1-proteinAspergillus niger N402polypeptide


Properties
Property NameValue
NoteEggNog:ENOG41
DBxrefInterPro:IPR036259
DBxrefInterPro:IPR020846
DBxrefInterPro:IPR011701
DBxrefInterPro:IPR001958
DBxrefPFAM:PF07690
Producthypothetical protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger N402 whole genome analysis2021-11-01
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
OGUI01000011.1supercontigOGUI01000011.1:68760..70174 +
Powered by Drupal