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Sequences
The following sequences are available for this feature:
mRNA from alignment at OGUI01000011.1:151470..152442- Legend: polypeptideCDSexon Hold the cursor over a type above to highlight its positions in the sequence below. >ATCC64974_71960-T1 ID=ATCC64974_71960-T1|Name=ATCC64974_71960-T1|organism=Aspergillus niger N402|type=mRNA|length=973bp|location=Sequence derived from alignment at OGUI01000011.1:151470..152442- (Aspergillus niger N402)
ATGGCATTCACTCTCTACTACTACACCCCCTCTGCTGCGGCAGCAGGCAT
CTTTGTTGTTCTGTTCGGCATCAGCACTGTATTGCACTTTCTGCAGCTGG
TTCGGACGCGAACGTGGTTCATGATCCCTTTCTTCATTGGAGGAATCTGT
CAGTCACCCAACCCCGACCATGCAGAACTACTACTGACATTATGCTTCAT
CTTCAGTGGAAACAATCGGATATGTTGGCCGTCTGCTGTCATCGCTTGAA
AGCCCCAACTACAGCACAGGCTCGTATGCCATGCAAAGCGCCCTTATTCT
GATCGCTCCCGCCTTCCTGGCTGCCAGTATTTACATGACCCTCGGTCGCA
TCATTCGAATGGTCCAAGCCGAACAGTACTCGGTGTTCAGGTTGAACTGG
GTGACCAAGATCTTTGTTGCGGGCGACGTTCTTTCCTTTCTGATGCAAGC
CTCTGGTGCGTATATTCCTGTCTCCGAATCCTTTCTGGCAGTATCGCTAA
GAACAGTAGGCGCTGGTCTCATGGTCAGCAACTCTAGCGACCCATCCACG
GGCGAGCACATTATTATCGGCGGTCTCTTTGTTCAGATTATCTTCTTCGG
CTTCTTCATTATCACCGCGCTCATCTTCCAAATGCGACTAGCGAAGGCTC
CCACCGGCACTTCCGTTGATTTATCGCACATCTGGCGTCGCCACATGAAC
GCTCTTTACATCTCCAGTGTCCTGATCTTCGTCCGTTCCATTGTCCGTGT
GGTGGAGTACCTGCAGGGATATGACGGCTATCTCATGAAGCATGAGGTTT
TCATTTATGTGTTTGATGCGTTGCTGATGTTCCTGGCGATGGAGATACTC
CAATTCATCCATCCCAGCCAAGTCAACTGCTATCTGGGGCGTGGAGACCG
TTATTCTGACAAGGTGATCAAGACGCAAAAGTTCATGTCTGTGCCGGTGG
AAATGGAGGTTTCGTCCGTTTGA back to topCoding sequence (CDS) from alignment at OGUI01000011.1:151470..152442- >ATCC64974_71960-T1 ID=ATCC64974_71960-T1|Name=ATCC64974_71960-T1|organism=Aspergillus niger N402|type=CDS|length=1830bp|location=Sequence derived from alignment at OGUI01000011.1:151470..152442- (Aspergillus niger N402)
TGGAAACAATCGGATATGTTGGCCGTCTGCTGTCATCGCTTGAAAGCCCC
AACTACAGCACAGGCTCGTATGCCATGCAAAGCGCCCTTATTCTGATCGC
TCCCGCCTTCCTGGCTGCCAGTATTTACATGACCCTCGGTCGCATCATTC
GAATGGTCCAAGCCGAACAGTACTCGGTGTTCAGGTTGAACTGGGTGACC
AAGATCTTTGTTGCGGGCGACGTTCTTTCCTTTCTGATGCAAGCCTCTGG
TGCGTATATTCCTGTCTCCGAATCCTTTCTGGCAGTATCGCTAAGAACAG
TAGGCGCTGGTCTCATGGTCAGCAACTCTAGCGACCCATCCACGGGCGAG
CACATTATTATCGGCGGTCTCTTTGTTCAGATTATCTTCTTCGGCTTCTT
CATTATCACCGCGCTCATCTTCCAAATGCGACTAGCGAAGGCTCCCACCG
GCACTTCCGTTGATTTATCGCACATCTGGCGTCGCCACATGAACGCTCTT
TACATCTCCAGTGTCCTGATCTTCGTCCGTTCCATTGTCCGTGTGGTGGA
GTACCTGCAGGGATATGACGGCTATCTCATGAAGCATGAGGTTTTCATTT
ATGTGTTTGATGCGTTGCTGATGTTCCTGGCGATGGAGATACTCCAATTC
ATCCATCCCAGCCAAGTCAACTGCTATCTGGGGCGTGGAGACCGTTATTC
TGACAAGGTGATCAAGACGCAAAAGTTCATGTCTGTGCCGGTGGAAATGG
AGGTTTCGTCCGTTTGAATGGCATTCACTCTCTACTACTACACCCCCTCT
GCTGCGGCAGCAGGCATCTTTGTTGTTCTGTTCGGCATCAGCACTGTATT
GCACTTTCTGCAGCTGGTTCGGACGCGAACGTGGTTCATGATCCCTTTCT
TCATTGGAGGAATCTTGGAAACAATCGGATATGTTGGCCGTCTGCTGTCA
TCGCTTGAAAGCCCCAACTACAGCACAGGCTCGTATGCCATGCAAAGCGC
CCTTATTCTGATCGCTCCCGCCTTCCTGGCTGCCAGTATTTACATGACCC
TCGGTCGCATCATTCGAATGGTCCAAGCCGAACAGTACTCGGTGTTCAGG
TTGAACTGGGTGACCAAGATCTTTGTTGCGGGCGACGTTCTTTCCTTTCT
GATGCAAGCCTCTGGTGCGTATATTCCTGTCTCCGAATCCTTTCTGGCAG
TATCGCTAAGAACAGTAGGCGCTGGTCTCATGGTCAGCAACTCTAGCGAC
CCATCCACGGGCGAGCACATTATTATCGGCGGTCTCTTTGTTCAGATTAT
CTTCTTCGGCTTCTTCATTATCACCGCGCTCATCTTCCAAATGCGACTAG
CGAAGGCTCCCACCGGCACTTCCGTTGATTTATCGCACATCTGGCGTCGC
CACATGAACGCTCTTTACATCTCCAGTGTCCTGATCTTCGTCCGTTCCAT
TGTCCGTGTGGTGGAGTACCTGCAGGGATATGACGGCTATCTCATGAAGC
ATGAGGTTTTCATTTATGTGTTTGATGCGTTGCTGATGTTCCTGGCGATG
GAGATACTCCAATTCATCCATCCCAGCCAAGTCAACTGCTATCTGGGGCG
TGGAGACCGTTATTCTGACAAGGTGATCAAGACGCAAAAGTTCATGTCTG
TGCCGGTGGAAATGGAGGTTTCGTCCGTTTGAATGGCATTCACTCTCTAC
TACTACACCCCCTCTGCTGCGGCAGCAGGCATCTTTGTTGTTCTGTTCGG
CATCAGCACTGTATTGCACTTTCTGCAGCTGGTTCGGACGCGAACGTGGT
TCATGATCCCTTTCTTCATTGGAGGAATCT back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Cellular Component
| Term | Definition |
|---|
| GO:0016021 | integral component of membrane |
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| ATCC64974_71960-T1 | ATCC64974_71960-T1-protein | Aspergillus niger N402 | polypeptide |
The following CDS feature(s) are a part of this mRNA:
The following exon feature(s) are a part of this mRNA:
Properties
| Property Name | Value |
|---|
| Note | antiSMASH:Cluster_10000111.1 |
| Note | EggNog:ENOG41 |
| DBxref | InterPro:IPR007568 |
| DBxref | PFAM:PF04479 |
| Product | hypothetical protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| OGUI01000011.1 | supercontig | OGUI01000011.1:151470..152442 - |
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