|
Sequences
The following sequences are available for this feature:
mRNA from alignment at OGUI01000011.1:331947..334235- Legend: CDSpolypeptideexon Hold the cursor over a type above to highlight its positions in the sequence below. >ATCC64974_72620-T1 ID=ATCC64974_72620-T1|Name=ATCC64974_72620-T1|organism=Aspergillus niger N402|type=mRNA|length=2289bp|location=Sequence derived from alignment at OGUI01000011.1:331947..334235- (Aspergillus niger N402) ATGGGTGTCGGTCGTCGTATGAAGAAGCAGGGCCCTCCGGCCCCGCTGGA
TGAGTCTAAGATCACCATCTTCAAGAAGCGCAAGGCTGGTGAGCCCGAGT
CGAAGCCGGAGACGGGAAAGAAGCGGAGAAGAGCTGATGCCGATGAGGAG
AATGTCGCAAAGCCCGTCGTCAAGAAGAAGGCCAATGGCGCTGCTAATGG
CAAGGCGACCAAGGCTGCGGCTAAGCCCAAGGCTGAGACTAAGCCCAAGG
CTAAGGCTGTCGAGAAGAAGCCGCAGTTCATGGATTCCGACGATGAGGAC
GAGGATGAGGATATGTCCGGTATTGAGGAAATGGATGCCGATGAGTTCGA
CGATCTGGATGGCGTCAGTGATGGCTCCATGGATAGCCAAGAGGAGGACA
ACGACTCTTTCGTGGACTCCGACGAAGATGACCACCCTCGCGAAGCCATG
TTCTCCGACGACGAAGACCTTTCCGACGCTGAAGAGAGGCTGACCGCCGC
CAACATCGAGGGATTGTCGCGCAAGCTGGACCTGCAAAGACAGGAAGAAG
AGGAGGAGGCCGAGCGCGAAATGAAGGAATCGGCCATGCAGACCAACATC
GCTGGTGACCGTCCCGATGTCTTTGGCGACGCCGAGGGCACTCAGCCCGG
CCTGGCTCCCGATCTTCAGCTGCTTCGTACCCGAATCACCGACACCATCC
GTATCCTGGGTGACCTGAAGACGCTTGGTGCCCCCGGCAAGTCTCGTACC
GATTACACTGAGCTGCTCATCGCCGACATCTGCACCTACTATGGCTACAC
CCCCTACCTCGCCGAGAAGCTCTTCAACCTCTTCACCCCCATGGAAGCCT
TCGCCTTCTTCGAAGCCAACGAAACCCCCCGTCCCGTCGTCATCCGTACC
AACACCCTCCGTACCAACCGTCGTTCCCTCGCCCAGGCTCTGATCAACCG
TGGTGTCGTGCTTGAGCCCGTTGGCAAGTGGTCCAAGGTTGGTCTTCAGG
TCTTCGAATCCGCTGTTCCCCTCGGTGCCACCCCCGAGTACCTGGCCGGT
CACTACATCATCCAGGCCGCCTCTTCCTTCCTCCCCGTCATGGCCCTCGC
CCCTCAACCCAACGAGCGTGTTCTCGATATGGCCTCCGCCCCCGGTGGTA
AGACCACCTACATCTCTGCCCTGATGCGCAACACCGGCTGCGTCATCGCC
AACGATGCCAGCAAGCCTCGTGCCAAGGGTCTGATCGGTAACATCCACCG
TCTGGGCTGCAAGAACACCATCGTGACCAACATGGACGCCCGCACCGCCT
TCCCCAAGGCCATGGGCGGTTTCGACCGTGTCCTGCTCGATGCCCCTTGC
ACCGGTACCGGTGTTATTTCCAAGGACCCCGGCGTCAAGACCTCCAAGAA
CGAGCGCGACTTCCTCGCCATCCCCCACATGCAGCGCCAGCTTCTTCTGG
CCGCCATCGACTCCGTCGACCATGCCTCCAAGACCGGCGGCTACGTCGTC
TACTCCACCTGCAGTGTCACCGTCGAGGAGAACGAAGCCGTCGTGCAGTA
CGTCCTGCGCAAGCGCCCCAACGTCAAGCTCGTCGACACCGGCCTCGGCG
ACTTCGGCAGCCCCGGTATGACCAGCTACATGGGCAAGCACTTCGATCCC
AAGATGACCCTGACGAGACGCTACTTCCCCCACCGCGAGAACGTCGACGG
TTTCTTCGTCTGCAAGCTCAAGAAGACTGCCGCCACCCCTACCCCCAAGC
CTGGCGATGCCGCTGCCGCTGCCCCTACCGACGGCAACTCCGCCAAGAAG
TCCAAGACCCTCTCCGTCGCCTCCACCACCACCGATGACGACGAACCCAT
CGACAAGACCCCCATCACCGACGAAGACGGCATGGTCATTGAAACCGAAG
GCGGCAGCTTCGGTCCCTTCGAAGAAGATGAGGAGGACGCTGCTCGCATC
GCCCGCGCTGAGCGCAACCGTCTCCGCCGCAAGGGTCTGAACCCCAAGGC
TATTCTCAACAAGCCCGCCAAGTCCAAGTCCAAGGACGAGTCATCCGCCC
CTACCGAGAAGACCGAGGAGAAGGAGAAGAAGAAGGAGGAATCCCCCAAG
AGGGAGACCCCCGCGAAGAAGGAATCCAAGGAATCCCCCAAGCCGAAGGC
CGATTCCAAGCCCACCAAGACCAAGACCGAGACAGCAGAACCCTCTACGA
CAAAGAAGCAGCAACAAAAACCCACCACCGCACAAGAACCCACAGAGAAG
AAGAAGAAGACTACTGCCAAGAAGGCAAGCAAGAAATAA back to topCoding sequence (CDS) from alignment at OGUI01000011.1:331947..334235- >ATCC64974_72620-T1 ID=ATCC64974_72620-T1|Name=ATCC64974_72620-T1|organism=Aspergillus niger N402|type=CDS|length=2289bp|location=Sequence derived from alignment at OGUI01000011.1:331947..334235- (Aspergillus niger N402) ATGGGTGTCGGTCGTCGTATGAAGAAGCAGGGCCCTCCGGCCCCGCTGGA TGAGTCTAAGATCACCATCTTCAAGAAGCGCAAGGCTGGTGAGCCCGAGT CGAAGCCGGAGACGGGAAAGAAGCGGAGAAGAGCTGATGCCGATGAGGAG AATGTCGCAAAGCCCGTCGTCAAGAAGAAGGCCAATGGCGCTGCTAATGG CAAGGCGACCAAGGCTGCGGCTAAGCCCAAGGCTGAGACTAAGCCCAAGG CTAAGGCTGTCGAGAAGAAGCCGCAGTTCATGGATTCCGACGATGAGGAC GAGGATGAGGATATGTCCGGTATTGAGGAAATGGATGCCGATGAGTTCGA CGATCTGGATGGCGTCAGTGATGGCTCCATGGATAGCCAAGAGGAGGACA ACGACTCTTTCGTGGACTCCGACGAAGATGACCACCCTCGCGAAGCCATG TTCTCCGACGACGAAGACCTTTCCGACGCTGAAGAGAGGCTGACCGCCGC CAACATCGAGGGATTGTCGCGCAAGCTGGACCTGCAAAGACAGGAAGAAG AGGAGGAGGCCGAGCGCGAAATGAAGGAATCGGCCATGCAGACCAACATC GCTGGTGACCGTCCCGATGTCTTTGGCGACGCCGAGGGCACTCAGCCCGG CCTGGCTCCCGATCTTCAGCTGCTTCGTACCCGAATCACCGACACCATCC GTATCCTGGGTGACCTGAAGACGCTTGGTGCCCCCGGCAAGTCTCGTACC GATTACACTGAGCTGCTCATCGCCGACATCTGCACCTACTATGGCTACAC CCCCTACCTCGCCGAGAAGCTCTTCAACCTCTTCACCCCCATGGAAGCCT TCGCCTTCTTCGAAGCCAACGAAACCCCCCGTCCCGTCGTCATCCGTACC AACACCCTCCGTACCAACCGTCGTTCCCTCGCCCAGGCTCTGATCAACCG TGGTGTCGTGCTTGAGCCCGTTGGCAAGTGGTCCAAGGTTGGTCTTCAGG TCTTCGAATCCGCTGTTCCCCTCGGTGCCACCCCCGAGTACCTGGCCGGT CACTACATCATCCAGGCCGCCTCTTCCTTCCTCCCCGTCATGGCCCTCGC CCCTCAACCCAACGAGCGTGTTCTCGATATGGCCTCCGCCCCCGGTGGTA AGACCACCTACATCTCTGCCCTGATGCGCAACACCGGCTGCGTCATCGCC AACGATGCCAGCAAGCCTCGTGCCAAGGGTCTGATCGGTAACATCCACCG TCTGGGCTGCAAGAACACCATCGTGACCAACATGGACGCCCGCACCGCCT TCCCCAAGGCCATGGGCGGTTTCGACCGTGTCCTGCTCGATGCCCCTTGC ACCGGTACCGGTGTTATTTCCAAGGACCCCGGCGTCAAGACCTCCAAGAA CGAGCGCGACTTCCTCGCCATCCCCCACATGCAGCGCCAGCTTCTTCTGG CCGCCATCGACTCCGTCGACCATGCCTCCAAGACCGGCGGCTACGTCGTC TACTCCACCTGCAGTGTCACCGTCGAGGAGAACGAAGCCGTCGTGCAGTA CGTCCTGCGCAAGCGCCCCAACGTCAAGCTCGTCGACACCGGCCTCGGCG ACTTCGGCAGCCCCGGTATGACCAGCTACATGGGCAAGCACTTCGATCCC AAGATGACCCTGACGAGACGCTACTTCCCCCACCGCGAGAACGTCGACGG TTTCTTCGTCTGCAAGCTCAAGAAGACTGCCGCCACCCCTACCCCCAAGC CTGGCGATGCCGCTGCCGCTGCCCCTACCGACGGCAACTCCGCCAAGAAG TCCAAGACCCTCTCCGTCGCCTCCACCACCACCGATGACGACGAACCCAT CGACAAGACCCCCATCACCGACGAAGACGGCATGGTCATTGAAACCGAAG GCGGCAGCTTCGGTCCCTTCGAAGAAGATGAGGAGGACGCTGCTCGCATC GCCCGCGCTGAGCGCAACCGTCTCCGCCGCAAGGGTCTGAACCCCAAGGC TATTCTCAACAAGCCCGCCAAGTCCAAGTCCAAGGACGAGTCATCCGCCC CTACCGAGAAGACCGAGGAGAAGGAGAAGAAGAAGGAGGAATCCCCCAAG AGGGAGACCCCCGCGAAGAAGGAATCCAAGGAATCCCCCAAGCCGAAGGC CGATTCCAAGCCCACCAAGACCAAGACCGAGACAGCAGAACCCTCTACGA CAAAGAAGCAGCAACAAAAACCCACCACCGCACAAGAACCCACAGAGAAG AAGAAGAAGACTACTGCCAAGAAGGCAAGCAAGAAATAA back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Biological Process
Term | Definition |
GO:0006364 | rRNA processing |
Vocabulary: Molecular Function
Term | Definition |
GO:0003723 | RNA binding |
GO:0008757 | S-adenosylmethionine-dependent methyltransferase activity |
GO:0008168 | methyltransferase activity |
Relationships
This mRNA is a part of the following gene feature(s):
The following CDS feature(s) are a part of this mRNA:
The following exon feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Feature Name | Unique Name | Species | Type |
ATCC64974_72620-T1 | ATCC64974_72620-T1-protein | Aspergillus niger N402 | polypeptide |
Properties
Property Name | Value |
DBxref | InterPro:IPR029063 |
DBxref | InterPro:IPR018314 |
DBxref | InterPro:IPR001678 |
DBxref | InterPro:IPR031341 |
DBxref | InterPro:IPR011023 |
DBxref | InterPro:IPR023267 |
DBxref | InterPro:IPR023273 |
DBxref | PFAM:PF17125 |
DBxref | PFAM:PF01189 |
Product | hypothetical protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
Aligned Feature | Feature Type | Alignment Location |
OGUI01000011.1 | supercontig | OGUI01000011.1:331947..334235 - |
|