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ATCC64974_72680-T1, ATCC64974_72680-T1 (mRNA) Aspergillus niger N402

Overview
NameATCC64974_72680-T1
Unique NameATCC64974_72680-T1
TypemRNA
OrganismAspergillus niger N402
Sequences
The following sequences are available for this feature:

mRNA from alignment at OGUI01000011.1:353504..355320+

Legend: exonpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>ATCC64974_72680-T1 ID=ATCC64974_72680-T1|Name=ATCC64974_72680-T1|organism=Aspergillus niger N402|type=mRNA|length=1817bp|location=Sequence derived from alignment at OGUI01000011.1:353504..355320+ (Aspergillus niger N402)
ATGCATTCCTACGTGCGACCAAATCAATTCGTCGCCTTCAAGCTCCCCTC
CGAGGCGACGAGGATCCAGAAAGTCATTCCCAATACGTATGCGCGCAAAT
GCTCCAATTTCTCAGGAATCGCACAGTGCTAATTATATTTTACAGACAAA
TTTCTCTAGGCAAATACGGCGCTTTCCCCGCCAACCAGATCATTGGCCGC
CCCTTCTATCTGACCTTCGAGATCCACGAAACCCCCGGACAAGCTGATAG
CACCTACCTCCGCATCGTATCGGCGGCGGAACTCCACGCGGAATCCCTCA
TCACCGAGGGCGAAGGCGACGGCGATGATGTGGAGGTCAATGAAGACGGC
ACCCCGGTGCGGTCGAATCGCGAAACCATCGACGACCGATCTACGCAAAA
GTTAACGCTAGAGGAGATTCTGGCGCTGAAGAAGGAAAGCACCGGCGCGG
GAAGGGAAATTATTGCGAAGCTGCTCGAGTCGCATCAGGCCTTGGATCAG
AAGACGGCATTCTCACTGGCCAAGTATAAGCTGCGGAAGGAGAAGAAGTA
CATGAAGCGGTTCACAGTGATTCCGTTGGATGTCAGTCTCTTGACGAACT
ACATGCTTGAGGACAAGGATGCAGCTCGGACTATGGAATTGCGCGACGAG
CTCATCGGGCTGATTGGGTGTTGGGGAAATGTACACCATGGTGGAAGCAC
CTCTTTTGACGAGACTGTTACGTCGAAACCGAATGGTCGCTATCTGGTTG
TTGATGATACAGGCGGTCTGGTCGTCGCAGCTTTGGCTGAGAGAATGGGA
ATTCTGTACCCTCATGATGGCGAGAACGATCAGGAGCAACAGGACGCCAT
TGAGCGACCTGCCGCGGCGGAAGCTGATGAGGCAGAGAAGCCCCAAGACG
GCGAAGAGAAAGCCCAGGATGGAGAGGAGCAATCCACGACGACCACACAT
CGCCCACCCCGTCGGCCACAGATGTCCGCTTCAGGAAACACTATCACCCT
TCTCCACGCCAACAAGCAGCCTAACCTAAGTCTCTTGAAATACTTTGGCT
ACGAACAAGACAGCCCGAGCGACACACATCCCCTCTACACAAACCTCAAG
ACCGTCTCTTTCATGCAGCTGCTCGACCCCATGGCGGACAACATCTACTC
CGAGGAGCCGTCAGTAGTACCCGAAGAAGAGCTTGCTACATACAAGGCCA
GCAAGCGTAGCGCCTACCACCGCAAGCGCGGGCGTTGGATGCGCGTCCGC
AAGGTAGTCGACGAAGCTCGGGCGGGCGGCTTCGATGGTCTCATTATCGC
CTCTCTAATGAGCCCGACGAGTATCCTGAAATATACTGTCCCATTGGTGG
GAGGCTCGGCACCGATTACTATCTACTCACCCACCGTTGAACCGTTGACA
GAGGTAATGGACTTGTATTCGACAGCGCGCAAGAACGCCTACATCGCTCG
GAAGCGTGAGCTACAAGAACAGCAACAGGCTGAGGGCCAGGATGAGTCTG
GCAAGATGCGCCCTGCACTGGAAGAGGAATTCACAGTCGACCCTACCATG
TTGCTTGCGCCGACACTGCAGACCTCCCGAGTACGTGTCTGGCAGGTCCT
TCCTGGGCGGACACATCCGTTGATGTCGGGACGTGGTGGTGCAGAAGGGT
ACATCTTCCATGGCATCCGGGTCATCCCGACGCAGGAGATCATTGAGGCA
GCTGGAAATCCAGGCCGGAAGAGGAGGAAGGTGACCAAGGAGACAGAGAC
ACCGACGCAGACGCAAACTCCGACGGAGACGCAGACAGGCAGCGGGGATG
TGGAGATGACGTCGTGA
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Coding sequence (CDS) from alignment at OGUI01000011.1:353504..355320+

>ATCC64974_72680-T1 ID=ATCC64974_72680-T1|Name=ATCC64974_72680-T1|organism=Aspergillus niger N402|type=CDS|length=3516bp|location=Sequence derived from alignment at OGUI01000011.1:353504..355320+ (Aspergillus niger N402)
ATGCATTCCTACGTGCGACCAAATCAATTCGTCGCCTTCAAGCTCCCCTC
CGAGGCGACGAGGATCCAGAAAGTCATTCCCAATACACAAATTTCTCTAG
GCAAATACGGCGCTTTCCCCGCCAACCAGATCATTGGCCGCCCCTTCTAT
CTGACCTTCGAGATCCACGAAACCCCCGGACAAGCTGATAGCACCTACCT
CCGCATCGTATCGGCGGCGGAACTCCACGCGGAATCCCTCATCACCGAGG
GCGAAGGCGACGGCGATGATGTGGAGGTCAATGAAGACGGCACCCCGGTG
CGGTCGAATCGCGAAACCATCGACGACCGATCTACGCAAAAGTTAACGCT
AGAGGAGATTCTGGCGCTGAAGAAGGAAAGCACCGGCGCGGGAAGGGAAA
TTATTGCGAAGCTGCTCGAGTCGCATCAGGCCTTGGATCAGAAGACGGCA
TTCTCACTGGCCAAGTATAAGCTGCGGAAGGAGAAGAAGTACATGAAGCG
GTTCACAGTGATTCCGTTGGATGTCAGTCTCTTGACGAACTACATGCTTG
AGGACAAGGATGCAGCTCGGACTATGGAATTGCGCGACGAGCTCATCGGG
CTGATTGGGTGTTGGGGAAATGTACACCATGGTGGAAGCACCTCTTTTGA
CGAGACTGTTACGTCGAAACCGAATGGTCGCTATCTGGTTGTTGATGATA
CAGGCGGTCTGGTCGTCGCAGCTTTGGCTGAGAGAATGGGAATTCTGTAC
CCTCATGATGGCGAGAACGATCAGGAGCAACAGGACGCCATTGAGCGACC
TGCCGCGGCGGAAGCTGATGAGGCAGAGAAGCCCCAAGACGGCGAAGAGA
AAGCCCAGGATGGAGAGGAGCAATCCACGACGACCACACATCGCCCACCC
CGTCGGCCACAGATGTCCGCTTCAGGAAACACTATCACCCTTCTCCACGC
CAACAAGCAGCCTAACCTAAGTCTCTTGAAATACTTTGGCTACGAACAAG
ACAGCCCGAGCGACACACATCCCCTCTACACAAACCTCAAGACCGTCTCT
TTCATGCAGCTGCTCGACCCCATGGCGGACAACATCTACTCCGAGGAGCC
GTCAGTAGTACCCGAAGAAGAGCTTGCTACATACAAGGCCAGCAAGCGTA
GCGCCTACCACCGCAAGCGCGGGCGTTGGATGCGCGTCCGCAAGGTAGTC
GACGAAGCTCGGGCGGGCGGCTTCGATGGTCTCATTATCGCCTCTCTAAT
GAGCCCGACGAGTATCCTGAAATATACTGTCCCATTGGTGGGAGGCTCGG
CACCGATTACTATCTACTCACCCACCGTTGAACCGTTGACAGAGGTAATG
GACTTGTATTCGACAGCGCGCAAGAACGCCTACATCGCTCGGAAGCGTGA
GCTACAAGAACAGCAACAGGCTGAGGGCCAGGATGAGTCTGGCAAGATGC
GCCCTGCACTGGAAGAGGAATTCACAGTCGACCCTACCATGTTGCTTGCG
CCGACACTGCAGACCTCCCGAGTACGTGTCTGGCAGGTCCTTCCTGGGCG
GACACATCCGTTGATGTCGGGACGTGGTGGTGCAGAAGGGTACATCTTCC
ATGGCATCCGGGTCATCCCGACGCAGGAGATCATTGAGGCAGCTGGAAAT
CCAGGCCGGAAGAGGAGGAAGGTGACCAAGGAGACAGAGACACCGACGCA
GACGCAAACTCCGACGGAGACGCAGACAGGCAGCGGGGATGTGGAGATGA
CGTCGTGAATGCATTCCTACGTGCGACCAAATCAATTCGTCGCCTTCAAG
CTCCCCTCCGAGGCGACGAGGATCCAGAAAGTCATTCCCAATACACAAAT
TTCTCTAGGCAAATACGGCGCTTTCCCCGCCAACCAGATCATTGGCCGCC
CCTTCTATCTGACCTTCGAGATCCACGAAACCCCCGGACAAGCTGATAGC
ACCTACCTCCGCATCGTATCGGCGGCGGAACTCCACGCGGAATCCCTCAT
CACCGAGGGCGAAGGCGACGGCGATGATGTGGAGGTCAATGAAGACGGCA
CCCCGGTGCGGTCGAATCGCGAAACCATCGACGACCGATCTACGCAAAAG
TTAACGCTAGAGGAGATTCTGGCGCTGAAGAAGGAAAGCACCGGCGCGGG
AAGGGAAATTATTGCGAAGCTGCTCGAGTCGCATCAGGCCTTGGATCAGA
AGACGGCATTCTCACTGGCCAAGTATAAGCTGCGGAAGGAGAAGAAGTAC
ATGAAGCGGTTCACAGTGATTCCGTTGGATGTCAGTCTCTTGACGAACTA
CATGCTTGAGGACAAGGATGCAGCTCGGACTATGGAATTGCGCGACGAGC
TCATCGGGCTGATTGGGTGTTGGGGAAATGTACACCATGGTGGAAGCACC
TCTTTTGACGAGACTGTTACGTCGAAACCGAATGGTCGCTATCTGGTTGT
TGATGATACAGGCGGTCTGGTCGTCGCAGCTTTGGCTGAGAGAATGGGAA
TTCTGTACCCTCATGATGGCGAGAACGATCAGGAGCAACAGGACGCCATT
GAGCGACCTGCCGCGGCGGAAGCTGATGAGGCAGAGAAGCCCCAAGACGG
CGAAGAGAAAGCCCAGGATGGAGAGGAGCAATCCACGACGACCACACATC
GCCCACCCCGTCGGCCACAGATGTCCGCTTCAGGAAACACTATCACCCTT
CTCCACGCCAACAAGCAGCCTAACCTAAGTCTCTTGAAATACTTTGGCTA
CGAACAAGACAGCCCGAGCGACACACATCCCCTCTACACAAACCTCAAGA
CCGTCTCTTTCATGCAGCTGCTCGACCCCATGGCGGACAACATCTACTCC
GAGGAGCCGTCAGTAGTACCCGAAGAAGAGCTTGCTACATACAAGGCCAG
CAAGCGTAGCGCCTACCACCGCAAGCGCGGGCGTTGGATGCGCGTCCGCA
AGGTAGTCGACGAAGCTCGGGCGGGCGGCTTCGATGGTCTCATTATCGCC
TCTCTAATGAGCCCGACGAGTATCCTGAAATATACTGTCCCATTGGTGGG
AGGCTCGGCACCGATTACTATCTACTCACCCACCGTTGAACCGTTGACAG
AGGTAATGGACTTGTATTCGACAGCGCGCAAGAACGCCTACATCGCTCGG
AAGCGTGAGCTACAAGAACAGCAACAGGCTGAGGGCCAGGATGAGTCTGG
CAAGATGCGCCCTGCACTGGAAGAGGAATTCACAGTCGACCCTACCATGT
TGCTTGCGCCGACACTGCAGACCTCCCGAGTACGTGTCTGGCAGGTCCTT
CCTGGGCGGACACATCCGTTGATGTCGGGACGTGGTGGTGCAGAAGGGTA
CATCTTCCATGGCATCCGGGTCATCCCGACGCAGGAGATCATTGAGGCAG
CTGGAAATCCAGGCCGGAAGAGGAGGAAGGTGACCAAGGAGACAGAGACA
CCGACGCAGACGCAAACTCCGACGGAGACGCAGACAGGCAGCGGGGATGT
GGAGATGACGTCGTGA
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Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Cellular Component
TermDefinition
GO:0031515tRNA (m1A) methyltransferase complex
Vocabulary: Biological Process
TermDefinition
GO:0030488tRNA methylation
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
TRM6ATCC64974_72680Aspergillus niger N402gene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ATCC64974_72680-T1.exon1ATCC64974_72680-T1.exon1Aspergillus niger N402exon
ATCC64974_72680-T1.exon2ATCC64974_72680-T1.exon2Aspergillus niger N402exon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ATCC64974_72680-T1.cdsATCC64974_72680-T1.cdsAspergillus niger N402CDS


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
ATCC64974_72680-T1ATCC64974_72680-T1-proteinAspergillus niger N402polypeptide


Properties
Property NameValue
NoteBUSCO:EOG09261I0F
DBxrefInterPro:IPR017423
DBxrefPFAM:PF04189
ProducttRNA (adenine(58)-N(1))-methyltransferase non-catalytic subunit trm6
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger N402 whole genome analysis2021-11-01
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
OGUI01000011.1supercontigOGUI01000011.1:353504..355320 +
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