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ATCC64974_72920-T1, ATCC64974_72920-T1 (mRNA) Aspergillus niger N402

Overview
NameATCC64974_72920-T1
Unique NameATCC64974_72920-T1
TypemRNA
OrganismAspergillus niger N402
Sequences
The following sequences are available for this feature:

mRNA from alignment at OGUI01000011.1:415598..416452-

Legend: polypeptideCDSexon
Hold the cursor over a type above to highlight its positions in the sequence below.
>ATCC64974_72920-T1 ID=ATCC64974_72920-T1|Name=ATCC64974_72920-T1|organism=Aspergillus niger N402|type=mRNA|length=855bp|location=Sequence derived from alignment at OGUI01000011.1:415598..416452- (Aspergillus niger N402)
ATGCCTGGTGGAAAGGGAAAGTCTATCGGTGGAAAGGCCGGCTCCAAGGA
CTCTGCGGGGAAGAGCCAGAAGTCCCACAGCGCAAAGGCTGGTCTGCAGG
TCCGTATTAGTCGTTCTTTTTTTCTCCTCCTGGCAGGCATATGACGCTTG
ACCCATCTCATGGGTTCTGGCGGCGACATGCCGCTGAAGCCGTTACGGCC
TGGGATTTTGCTTTTTGCCTCCTTTGCCCCTCGCGATCGCCTCTATGTTG
CCAAAAGCACGCGTATAGCTCTTTTATATTGAATAATACCCCTTTAAGAG
CTATACCGCACCGGCTAGTCACAGTTCAGGCGACAGGGTTGCGAGGGGTG
GCGGTCATGATCCCTCCCGTATTTACCTTCAAAGCTTCACTTCACACATT
CATGCCTATCTATTATCATCAGTTTCATTCGCTAACATTATCCTTCGATC
ACAGTTCCCTTGCGGTCGTGTTAAGCGCTTTTTGAAGAACAACACCCAGA
ACAAGATGCGCGTTGGCGCCAAAGGTACGACCCTTTCCATTAAGCCTACA
GAAGGCGCACCTTCCTTTGTCTCCTCTTTCAACCATGCTGACAAATCCCG
ATCGCAGCCGCCGTGTATGTCACCGCTGTTCTCGAATATCTGACCGCAGA
AGTTCTCGAATTGGCCGGAAACGCTGCCAAGGATCTCAAAGTCAAGCGTA
TCACCCCGCGTCATCTGCAGCTCGCCATCCGTGGAGATGAGGAGCTGGAT
ACCCTGATCCGCGCCACTATTGCCTTCGGAGGTGTTCTGCCGCGCATCAA
CCGCGCGCTCTTGCTGAAGGTGGAGCAAAAGAAGAAGAACAAGACTGAGG
CTTAA
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Coding sequence (CDS) from alignment at OGUI01000011.1:415598..416452-

>ATCC64974_72920-T1 ID=ATCC64974_72920-T1|Name=ATCC64974_72920-T1|organism=Aspergillus niger N402|type=CDS|length=1251bp|location=Sequence derived from alignment at OGUI01000011.1:415598..416452- (Aspergillus niger N402)
CCGCCGTGTATGTCACCGCTGTTCTCGAATATCTGACCGCAGAAGTTCTC
GAATTGGCCGGAAACGCTGCCAAGGATCTCAAAGTCAAGCGTATCACCCC
GCGTCATCTGCAGCTCGCCATCCGTGGAGATGAGGAGCTGGATACCCTGA
TCCGCGCCACTATTGCCTTCGGAGGTGTTCTGCCGCGCATCAACCGCGCG
CTCTTGCTGAAGGTGGAGCAAAAGAAGAAGAACAAGACTGAGGCTTAATT
CCCTTGCGGTCGTGTTAAGCGCTTTTTGAAGAACAACACCCAGAACAAGA
TGCGCGTTGGCGCCAAAGATGCCTGGTGGAAAGGGAAAGTCTATCGGTGG
AAAGGCCGGCTCCAAGGACTCTGCGGGGAAGAGCCAGAAGTCCCACAGCG
CAAAGGCTGGTCTGCAGCCGCCGTGTATGTCACCGCTGTTCTCGAATATC
TGACCGCAGAAGTTCTCGAATTGGCCGGAAACGCTGCCAAGGATCTCAAA
GTCAAGCGTATCACCCCGCGTCATCTGCAGCTCGCCATCCGTGGAGATGA
GGAGCTGGATACCCTGATCCGCGCCACTATTGCCTTCGGAGGTGTTCTGC
CGCGCATCAACCGCGCGCTCTTGCTGAAGGTGGAGCAAAAGAAGAAGAAC
AAGACTGAGGCTTAATTCCCTTGCGGTCGTGTTAAGCGCTTTTTGAAGAA
CAACACCCAGAACAAGATGCGCGTTGGCGCCAAAGATGCCTGGTGGAAAG
GGAAAGTCTATCGGTGGAAAGGCCGGCTCCAAGGACTCTGCGGGGAAGAG
CCAGAAGTCCCACAGCGCAAAGGCTGGTCTGCAGCCGCCGTGTATGTCAC
CGCTGTTCTCGAATATCTGACCGCAGAAGTTCTCGAATTGGCCGGAAACG
CTGCCAAGGATCTCAAAGTCAAGCGTATCACCCCGCGTCATCTGCAGCTC
GCCATCCGTGGAGATGAGGAGCTGGATACCCTGATCCGCGCCACTATTGC
CTTCGGAGGTGTTCTGCCGCGCATCAACCGCGCGCTCTTGCTGAAGGTGG
AGCAAAAGAAGAAGAACAAGACTGAGGCTTAATTCCCTTGCGGTCGTGTT
AAGCGCTTTTTGAAGAACAACACCCAGAACAAGATGCGCGTTGGCGCCAA
AGATGCCTGGTGGAAAGGGAAAGTCTATCGGTGGAAAGGCCGGCTCCAAG
GACTCTGCGGGGAAGAGCCAGAAGTCCCACAGCGCAAAGGCTGGTCTGCA
G
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Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Cellular Component
TermDefinition
GO:0005634nucleus
GO:0000786nucleosome
Vocabulary: Molecular Function
TermDefinition
GO:0046982protein heterodimerization activity
GO:0003677DNA binding
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
HTZ1ATCC64974_72920Aspergillus niger N402gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
ATCC64974_72920-T1ATCC64974_72920-T1-proteinAspergillus niger N402polypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ATCC64974_72920-T1.cdsATCC64974_72920-T1.cdsAspergillus niger N402CDS


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ATCC64974_72920-T1.exon3ATCC64974_72920-T1.exon3Aspergillus niger N402exon
ATCC64974_72920-T1.exon2ATCC64974_72920-T1.exon2Aspergillus niger N402exon
ATCC64974_72920-T1.exon1ATCC64974_72920-T1.exon1Aspergillus niger N402exon


Properties
Property NameValue
DBxrefInterPro:IPR007125
DBxrefInterPro:IPR032454
DBxrefInterPro:IPR009072
DBxrefInterPro:IPR002119
DBxrefPFAM:PF16211
DBxrefPFAM:PF00125
DBxrefPFAM:PF00808
Producthistone H2A.Z
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger N402 whole genome analysis2021-11-01
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
OGUI01000011.1supercontigOGUI01000011.1:415598..416452 -
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