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ATCC64974_72980-T1, ATCC64974_72980-T1 (mRNA) Aspergillus niger N402

Overview
NameATCC64974_72980-T1
Unique NameATCC64974_72980-T1
TypemRNA
OrganismAspergillus niger N402
Sequences
The following sequences are available for this feature:

mRNA from alignment at OGUI01000011.1:432939..433978+

Legend: exonpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>ATCC64974_72980-T1 ID=ATCC64974_72980-T1|Name=ATCC64974_72980-T1|organism=Aspergillus niger N402|type=mRNA|length=1040bp|location=Sequence derived from alignment at OGUI01000011.1:432939..433978+ (Aspergillus niger N402)
ATGTCGACCACCACCGCGACGGCGATCCAAAGCTCGCGCCCGTACGTCCT
GACATCGACCTACCTCACTACCGCTTCCTTCTCCACGCAATCACCACTGA
CCATGTCATGAATAATAGCCCCATCATCCCCAAAGACTTCTCCGCGCAAC
AACCCAAAACAATCCGCCTGTACCCCCTCTCCAACTACACATTCGGCACC
AAGGAAACGCAACCGGAGGAGGACCCGTCCGTTTTGGCGCGTCTAAAACG
TCTCGAGGAGCACTACGACCTACATGGCATGAGACGCACCTGCGAGGGCG
TCCTCGTCTGCCACGAACACAACCATCCTCATGTGCTGATGCTGCAGATT
GCCAACGCGTTTTTCAAGCTGTACGTTTGTATACCCTCTGCAATCTGGAG
CTTCTACTTACCCTGGTGGATACAGCCCCGGTGACTACCTCCACTTCGAA
GACGACGAAGTCGAAGGCTTCAAGAAACGCCTCAATGAACGTCTCGCCCC
CGTCGGCTCCCAGTTCTCGGGCGAAGGCGTTAACGAAGACTGGGAGATTG
GTGACACGTTGGCGCAATGGTGGAGGCCGAACTTTGAGACGTTCATGTAC
CCTTTCCTCCCGGGACATGTGACTCGGCCGAAGGAGTGCAAGAAGTTGTA
TTTCATCCAATTGCCGAAGAAGAGTAAGCCTTCCTTCATATATCATGCAC
AGTCAGGCCATCAGGGAGGAATGGTATGATTAATTTGTGTTGTGCAGAGG
TCCTCTCGGTCCCGAAGAACATGAAACTCCTCGCCGTCCCACTCTTCGAA
CTATACGACAACACGGCCCGGTATGGCCCTCAGCTCTCGGCTATCCCGCA
CTTGCTGTCGAGATACAATTTTGAGTTTGTCGATGAGAACGACAACGTGG
TTGCCGCGACGCCGGGCACGCCCTTGCCGGATCATCAGATCCCCCGGACG
AAGGTGCTGGCTGGTGATAGCGGTGATGGACAGGATGAGGGGATGACGGA
TTACCCTTCTGGAGAGGGCGAAAACGGGGCTAGTGCGTAG
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Coding sequence (CDS) from alignment at OGUI01000011.1:432939..433978+

>ATCC64974_72980-T1 ID=ATCC64974_72980-T1|Name=ATCC64974_72980-T1|organism=Aspergillus niger N402|type=CDS|length=3336bp|location=Sequence derived from alignment at OGUI01000011.1:432939..433978+ (Aspergillus niger N402)
ATGTCGACCACCACCGCGACGGCGATCCAAAGCTCGCGCCCCCCCATCAT
CCCCAAAGACTTCTCCGCGCAACAACCCAAAACAATCCGCCTGTACCCCC
TCTCCAACTACACATTCGGCACCAAGGAAACGCAACCGGAGGAGGACCCG
TCCGTTTTGGCGCGTCTAAAACGTCTCGAGGAGCACTACGACCTACATGG
CATGAGACGCACCTGCGAGGGCGTCCTCGTCTGCCACGAACACAACCATC
CTCATGTGCTGATGCTGCAGATTGCCAACGCGTTTTTCAAGCTCCCCGGT
GACTACCTCCACTTCGAAGACGACGAAGTCGAAGGCTTCAAGAAACGCCT
CAATGAACGTCTCGCCCCCGTCGGCTCCCAGTTCTCGGGCGAAGGCGTTA
ACGAAGACTGGGAGATTGGTGACACGTTGGCGCAATGGTGGAGGCCGAAC
TTTGAGACGTTCATGTACCCTTTCCTCCCGGGACATGTGACTCGGCCGAA
GGAGTGCAAGAAGTTGTATTTCATCCAATTGCCGAAGAAGAAGGTCCTCT
CGGTCCCGAAGAACATGAAACTCCTCGCCGTCCCACTCTTCGAACTATAC
GACAACACGGCCCGGTATGGCCCTCAGCTCTCGGCTATCCCGCACTTGCT
GTCGAGATACAATTTTGAGTTTGTCGATGAGAACGACAACGTGGTTGCCG
CGACGCCGGGCACGCCCTTGCCGGATCATCAGATCCCCCGGACGAAGGTG
CTGGCTGGTGATAGCGGTGATGGACAGGATGAGGGGATGACGGATTACCC
TTCTGGAGAGGGCGAAAACGGGGCTAGTGCGTAGATGTCGACCACCACCG
CGACGGCGATCCAAAGCTCGCGCCCCCCCATCATCCCCAAAGACTTCTCC
GCGCAACAACCCAAAACAATCCGCCTGTACCCCCTCTCCAACTACACATT
CGGCACCAAGGAAACGCAACCGGAGGAGGACCCGTCCGTTTTGGCGCGTC
TAAAACGTCTCGAGGAGCACTACGACCTACATGGCATGAGACGCACCTGC
GAGGGCGTCCTCGTCTGCCACGAACACAACCATCCTCATGTGCTGATGCT
GCAGATTGCCAACGCGTTTTTCAAGCTCCCCGGTGACTACCTCCACTTCG
AAGACGACGAAGTCGAAGGCTTCAAGAAACGCCTCAATGAACGTCTCGCC
CCCGTCGGCTCCCAGTTCTCGGGCGAAGGCGTTAACGAAGACTGGGAGAT
TGGTGACACGTTGGCGCAATGGTGGAGGCCGAACTTTGAGACGTTCATGT
ACCCTTTCCTCCCGGGACATGTGACTCGGCCGAAGGAGTGCAAGAAGTTG
TATTTCATCCAATTGCCGAAGAAGAAGGTCCTCTCGGTCCCGAAGAACAT
GAAACTCCTCGCCGTCCCACTCTTCGAACTATACGACAACACGGCCCGGT
ATGGCCCTCAGCTCTCGGCTATCCCGCACTTGCTGTCGAGATACAATTTT
GAGTTTGTCGATGAGAACGACAACGTGGTTGCCGCGACGCCGGGCACGCC
CTTGCCGGATCATCAGATCCCCCGGACGAAGGTGCTGGCTGGTGATAGCG
GTGATGGACAGGATGAGGGGATGACGGATTACCCTTCTGGAGAGGGCGAA
AACGGGGCTAGTGCGTAGATGTCGACCACCACCGCGACGGCGATCCAAAG
CTCGCGCCCCCCCATCATCCCCAAAGACTTCTCCGCGCAACAACCCAAAA
CAATCCGCCTGTACCCCCTCTCCAACTACACATTCGGCACCAAGGAAACG
CAACCGGAGGAGGACCCGTCCGTTTTGGCGCGTCTAAAACGTCTCGAGGA
GCACTACGACCTACATGGCATGAGACGCACCTGCGAGGGCGTCCTCGTCT
GCCACGAACACAACCATCCTCATGTGCTGATGCTGCAGATTGCCAACGCG
TTTTTCAAGCTCCCCGGTGACTACCTCCACTTCGAAGACGACGAAGTCGA
AGGCTTCAAGAAACGCCTCAATGAACGTCTCGCCCCCGTCGGCTCCCAGT
TCTCGGGCGAAGGCGTTAACGAAGACTGGGAGATTGGTGACACGTTGGCG
CAATGGTGGAGGCCGAACTTTGAGACGTTCATGTACCCTTTCCTCCCGGG
ACATGTGACTCGGCCGAAGGAGTGCAAGAAGTTGTATTTCATCCAATTGC
CGAAGAAGAAGGTCCTCTCGGTCCCGAAGAACATGAAACTCCTCGCCGTC
CCACTCTTCGAACTATACGACAACACGGCCCGGTATGGCCCTCAGCTCTC
GGCTATCCCGCACTTGCTGTCGAGATACAATTTTGAGTTTGTCGATGAGA
ACGACAACGTGGTTGCCGCGACGCCGGGCACGCCCTTGCCGGATCATCAG
ATCCCCCGGACGAAGGTGCTGGCTGGTGATAGCGGTGATGGACAGGATGA
GGGGATGACGGATTACCCTTCTGGAGAGGGCGAAAACGGGGCTAGTGCGT
AGATGTCGACCACCACCGCGACGGCGATCCAAAGCTCGCGCCCCCCCATC
ATCCCCAAAGACTTCTCCGCGCAACAACCCAAAACAATCCGCCTGTACCC
CCTCTCCAACTACACATTCGGCACCAAGGAAACGCAACCGGAGGAGGACC
CGTCCGTTTTGGCGCGTCTAAAACGTCTCGAGGAGCACTACGACCTACAT
GGCATGAGACGCACCTGCGAGGGCGTCCTCGTCTGCCACGAACACAACCA
TCCTCATGTGCTGATGCTGCAGATTGCCAACGCGTTTTTCAAGCTCCCCG
GTGACTACCTCCACTTCGAAGACGACGAAGTCGAAGGCTTCAAGAAACGC
CTCAATGAACGTCTCGCCCCCGTCGGCTCCCAGTTCTCGGGCGAAGGCGT
TAACGAAGACTGGGAGATTGGTGACACGTTGGCGCAATGGTGGAGGCCGA
ACTTTGAGACGTTCATGTACCCTTTCCTCCCGGGACATGTGACTCGGCCG
AAGGAGTGCAAGAAGTTGTATTTCATCCAATTGCCGAAGAAGAAGGTCCT
CTCGGTCCCGAAGAACATGAAACTCCTCGCCGTCCCACTCTTCGAACTAT
ACGACAACACGGCCCGGTATGGCCCTCAGCTCTCGGCTATCCCGCACTTG
CTGTCGAGATACAATTTTGAGTTTGTCGATGAGAACGACAACGTGGTTGC
CGCGACGCCGGGCACGCCCTTGCCGGATCATCAGATCCCCCGGACGAAGG
TGCTGGCTGGTGATAGCGGTGATGGACAGGATGAGGGGATGACGGATTAC
CCTTCTGGAGAGGGCGAAAACGGGGCTAGTGCGTAG
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Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Cellular Component
TermDefinition
GO:0005849mRNA cleavage factor complex
Vocabulary: Molecular Function
TermDefinition
GO:0003729mRNA binding
Vocabulary: Biological Process
TermDefinition
GO:0006378mRNA polyadenylation
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
ATCC64974_72980ATCC64974_72980Aspergillus niger N402gene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ATCC64974_72980-T1.exon1ATCC64974_72980-T1.exon1Aspergillus niger N402exon
ATCC64974_72980-T1.exon2ATCC64974_72980-T1.exon2Aspergillus niger N402exon
ATCC64974_72980-T1.exon3ATCC64974_72980-T1.exon3Aspergillus niger N402exon
ATCC64974_72980-T1.exon4ATCC64974_72980-T1.exon4Aspergillus niger N402exon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ATCC64974_72980-T1.cdsATCC64974_72980-T1.cdsAspergillus niger N402CDS


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
ATCC64974_72980-T1ATCC64974_72980-T1-proteinAspergillus niger N402polypeptide


Properties
Property NameValue
DBxrefInterPro:IPR016706
DBxrefPFAM:PF13869
Producthypothetical protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger N402 whole genome analysis2021-11-01
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
OGUI01000011.1supercontigOGUI01000011.1:432939..433978 +
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