You are here

Home

ATCC64974_73350-T1, ATCC64974_73350-T1 (mRNA) Aspergillus niger N402

Overview
NameATCC64974_73350-T1
Unique NameATCC64974_73350-T1
TypemRNA
OrganismAspergillus niger N402
Sequences
The following sequences are available for this feature:

mRNA from alignment at OGUI01000011.1:536658..537218-

Legend: polypeptideCDSexon
Hold the cursor over a type above to highlight its positions in the sequence below.
>ATCC64974_73350-T1 ID=ATCC64974_73350-T1|Name=ATCC64974_73350-T1|organism=Aspergillus niger N402|type=mRNA|length=561bp|location=Sequence derived from alignment at OGUI01000011.1:536658..537218- (Aspergillus niger N402)
ATGGCTTCTCTCAATAGCACAATCGTCCCTATTACCGGCGCCAACCAGGG
TCTAGGCTTTGCGGTCGCCAAAAAGCTAGCCACCGATCACCCGGGATACC
ATGTGCTCATGGGCTACCGCGATGCTACTAAGGGCGAAGAGGCCATTGCC
AAGCTAAAAAGCCGAGGACTGACCGTCGAGGGAGTGATGATCGACGTGAC
CGACGACACCTCCATGTAGAGGGCCGCCGAACAGGCTTCAGCCCAGTTCG
GTCGGCTAGACGTCCTCATCAACAACGCCGGAGTGATCTCCGAGGGACGC
TCACCCGAAGGCACCTCCCTCCGCCATACCTGGCAGACTGGCTTCGACAT
CAACATCACGGCCCACGTCATCACTCCAGAAGCCTTTGTGCCGCTCTTGG
AGAAGGCCGCTCTGCCGCTAGTGGTCTTTGTGTCCTCAGCTCTAGGATCA
TGTCCTGGCCGGTTGGACCCCAACGACCAATTTGCTGCCTTCCGATTCCC
CGCCTACCGCAGCACCAAGGTGGCGCTCAACATGGTCGCCTGTCACTATG
CCAATCTATAG
back to top

Coding sequence (CDS) from alignment at OGUI01000011.1:536658..537218-

>ATCC64974_73350-T1 ID=ATCC64974_73350-T1|Name=ATCC64974_73350-T1|organism=Aspergillus niger N402|type=CDS|length=1020bp|location=Sequence derived from alignment at OGUI01000011.1:536658..537218- (Aspergillus niger N402)
TTCGGTCGGCTAGACGTCCTCATCAACAACGCCGGAGTGATCTCCGAGGG
ACGCTCACCCGAAGGCACCTCCCTCCGCCATACCTGGCAGACTGGCTTCG
ACATCAACATCACGGCCCACGTCATCACTCCAGAAGCCTTTGTGCCGCTC
TTGGAGAAGGCCGCTCTGCCGCTAGTGGTCTTTGTGTCCTCAGCTCTAGG
ATCATGTCCTGGCCGGTTGGACCCCAACGACCAATTTGCTGCCTTCCGAT
TCCCCGCCTACCGCAGCACCAAGGTGGCGCTCAACATGGTCGCCTGTCAC
TATGCCAATCTATAGATGGCTTCTCTCAATAGCACAATCGTCCCTATTAC
CGGCGCCAACCAGGGTCTAGGCTTTGCGGTCGCCAAAAAGCTAGCCACCG
ATCACCCGGGATACCATGTGCTCATGGGCTACCGCGATGCTACTAAGGGC
GAAGAGGCCATTGCCAAGCTAAAAAGCCGAGGACTGACCGTCGAGGGAGT
GATGATCGACTTCGGTCGGCTAGACGTCCTCATCAACAACGCCGGAGTGA
TCTCCGAGGGACGCTCACCCGAAGGCACCTCCCTCCGCCATACCTGGCAG
ACTGGCTTCGACATCAACATCACGGCCCACGTCATCACTCCAGAAGCCTT
TGTGCCGCTCTTGGAGAAGGCCGCTCTGCCGCTAGTGGTCTTTGTGTCCT
CAGCTCTAGGATCATGTCCTGGCCGGTTGGACCCCAACGACCAATTTGCT
GCCTTCCGATTCCCCGCCTACCGCAGCACCAAGGTGGCGCTCAACATGGT
CGCCTGTCACTATGCCAATCTATAGATGGCTTCTCTCAATAGCACAATCG
TCCCTATTACCGGCGCCAACCAGGGTCTAGGCTTTGCGGTCGCCAAAAAG
CTAGCCACCGATCACCCGGGATACCATGTGCTCATGGGCTACCGCGATGC
TACTAAGGGCGAAGAGGCCATTGCCAAGCTAAAAAGCCGAGGACTGACCG
TCGAGGGAGTGATGATCGAC
back to top
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
ATCC64974_73350ATCC64974_73350Aspergillus niger N402gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
ATCC64974_73350-T1ATCC64974_73350-T1-proteinAspergillus niger N402polypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ATCC64974_73350-T1.cdsATCC64974_73350-T1.cdsAspergillus niger N402CDS


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ATCC64974_73350-T1.exon2ATCC64974_73350-T1.exon2Aspergillus niger N402exon
ATCC64974_73350-T1.exon1ATCC64974_73350-T1.exon1Aspergillus niger N402exon


Properties
Property NameValue
NoteEggNog:ENOG41
DBxrefInterPro:IPR036291
DBxrefInterPro:IPR002347
DBxrefPFAM:PF13561
DBxrefPFAM:PF00106
Producthypothetical protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger N402 whole genome analysis2021-11-01
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
OGUI01000011.1supercontigOGUI01000011.1:536658..537218 -
Powered by Drupal