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ATCC64974_73840-T1, ATCC64974_73840-T1 (mRNA) Aspergillus niger N402

Overview
NameATCC64974_73840-T1
Unique NameATCC64974_73840-T1
TypemRNA
OrganismAspergillus niger N402
Sequences
The following sequences are available for this feature:

mRNA from alignment at OGUI01000013.1:4434..5948+

Legend: exonpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>ATCC64974_73840-T1 ID=ATCC64974_73840-T1|Name=ATCC64974_73840-T1|organism=Aspergillus niger N402|type=mRNA|length=1515bp|location=Sequence derived from alignment at OGUI01000013.1:4434..5948+ (Aspergillus niger N402)
ATGGCCGCCGCTGTCGCCAACGGCCATACCACTTCCTCCGCCGATGTCGC
CAAACAGCGCAGGCTGATCCACCACCATGCCGATGTCGTGATTGTAGGCG
CCGGGATCCTAGGTTGTGCATTGGCGGTCGCACTTGGAAGACAAGGGCGC
AGCGTCCTGCTGCTGGAGGCGTCCATGAAGGAGCCTGACCGGATCGTGGG
AGAGTTACTACAGCCTGGCGGTGTCGAGGCGCTTGAGAAACTGGGTCTTG
CTGATTGTCTCGAAGACATTGATGCCATCCCAGCGAAAGGCTACCATGTG
ACATACTTTGGGAAACCCGTCTCGTTCACCTACCCCAAAGCCTCCCCGTC
GTCGCCCGCCCCGCAAGGGTGTTGTTTCCACCATGGCCGCTTCGTCATGA
AGCTGCGAGCTGCTGCGCTGGCCTGCCCCAATGTCACAGTGGTGGAGACC
AAGGCCACCGACTTGGTCACTTGCTCCCACACCAAGCAGGTTCTTGGTGT
CGAGTGTGTGACCGGCGACATGAAGGATTGCTACTTTGGCCATCTTACGG
TGGTGGCCGATGGCTACGCCTCCAAACTCCGCAAGCAATACCATTCCAAT
ACTCCCAAGGTCCGCTCCAGGTTCTGGGGCTTGGAATTGATCGATGCAGA
CCTTCCCAAGCCTTATCATGGCCACGTCCTCCTTAGCGACAATGCCCCTA
TCCTCGTCTACCAAATTGGCACCCATGAAACCCGCATCCTCATCGACATC
CCAGAGAACCTCCCGTCGGCCTCCGTCAAGAACGGCGGCGTCAAGAACCA
CCTTCGCAACGTCGTTCTCCCGTCCCTTCCCGAATGCATTCAGCCTTCAT
TCGTGGCTGCGTTGGACAAAGGTCAGCTGCGGTCAATGCCGAACTCATAT
CTGCCTAGTACCCCGAACAAGACTCCCGGTCTGGTCATCCTGGGCGATGC
GCTCAACATGCGGCATCCGCTGACCGGTGGAGGAATGACCGTCGCATTCA
ACGACGTTGTGGTCCTTCGTGATCTGCTGAGTCCGGAGAAGGTCCCTTCC
CTCGCTAATCATGAGCGCGTCCTGCAACAGCTGTCCTCCTTCCGTTGGCA
ACGGAAGAAAACATGTTCAGTCATCAACATTTTGGCGCAGGCTCTCTATG
CCTTGTTTGCTGCTAAAGGTTCGTTTTACATTGTTTCCCATCCGTCACAC
CCAGCGTCCCAGCAGCTAACGCCAGACCCCACTGGGGCAAATCTAGACGA
GAATATGCGTGCTCTCCAACGGGGCTGCTTCCGTTACTTTGAGTTAGGAA
TGACCAGCGGGCCCATAGGCCTTCTGGGTGGACTGATCAAAAAGCCGGAC
GTTCTATTCTGGCATTTCTTCAGTGTCGCCTTTCTCTCTCTGTGGCTCGT
CATCACCGAGCCACCTTTCTACAAGCTGCCTCTGGCTTTGTTGAAATGCA
TTATGGTCTTTTGGACAGCATGCGTCGTGATCTTCCCCTACATGCTGATA
GAGGCATTCTGCTAA
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Coding sequence (CDS) from alignment at OGUI01000013.1:4434..5948+

>ATCC64974_73840-T1 ID=ATCC64974_73840-T1|Name=ATCC64974_73840-T1|organism=Aspergillus niger N402|type=CDS|length=2874bp|location=Sequence derived from alignment at OGUI01000013.1:4434..5948+ (Aspergillus niger N402)
ATGGCCGCCGCTGTCGCCAACGGCCATACCACTTCCTCCGCCGATGTCGC
CAAACAGCGCAGGCTGATCCACCACCATGCCGATGTCGTGATTGTAGGCG
CCGGGATCCTAGGTTGTGCATTGGCGGTCGCACTTGGAAGACAAGGGCGC
AGCGTCCTGCTGCTGGAGGCGTCCATGAAGGAGCCTGACCGGATCGTGGG
AGAGTTACTACAGCCTGGCGGTGTCGAGGCGCTTGAGAAACTGGGTCTTG
CTGATTGTCTCGAAGACATTGATGCCATCCCAGCGAAAGGCTACCATGTG
ACATACTTTGGGAAACCCGTCTCGTTCACCTACCCCAAAGCCTCCCCGTC
GTCGCCCGCCCCGCAAGGGTGTTGTTTCCACCATGGCCGCTTCGTCATGA
AGCTGCGAGCTGCTGCGCTGGCCTGCCCCAATGTCACAGTGGTGGAGACC
AAGGCCACCGACTTGGTCACTTGCTCCCACACCAAGCAGGTTCTTGGTGT
CGAGTGTGTGACCGGCGACATGAAGGATTGCTACTTTGGCCATCTTACGG
TGGTGGCCGATGGCTACGCCTCCAAACTCCGCAAGCAATACCATTCCAAT
ACTCCCAAGGTCCGCTCCAGGTTCTGGGGCTTGGAATTGATCGATGCAGA
CCTTCCCAAGCCTTATCATGGCCACGTCCTCCTTAGCGACAATGCCCCTA
TCCTCGTCTACCAAATTGGCACCCATGAAACCCGCATCCTCATCGACATC
CCAGAGAACCTCCCGTCGGCCTCCGTCAAGAACGGCGGCGTCAAGAACCA
CCTTCGCAACGTCGTTCTCCCGTCCCTTCCCGAATGCATTCAGCCTTCAT
TCGTGGCTGCGTTGGACAAAGGTCAGCTGCGGTCAATGCCGAACTCATAT
CTGCCTAGTACCCCGAACAAGACTCCCGGTCTGGTCATCCTGGGCGATGC
GCTCAACATGCGGCATCCGCTGACCGGTGGAGGAATGACCGTCGCATTCA
ACGACGTTGTGGTCCTTCGTGATCTGCTGAGTCCGGAGAAGGTCCCTTCC
CTCGCTAATCATGAGCGCGTCCTGCAACAGCTGTCCTCCTTCCGTTGGCA
ACGGAAGAAAACATGTTCAGTCATCAACATTTTGGCGCAGGCTCTCTATG
CCTTGTTTGCTGCTAAAGACGAGAATATGCGTGCTCTCCAACGGGGCTGC
TTCCGTTACTTTGAGTTAGGAATGACCAGCGGGCCCATAGGCCTTCTGGG
TGGACTGATCAAAAAGCCGGACGTTCTATTCTGGCATTTCTTCAGTGTCG
CCTTTCTCTCTCTGTGGCTCGTCATCACCGAGCCACCTTTCTACAAGCTG
CCTCTGGCTTTGTTGAAATGCATTATGGTCTTTTGGACAGCATGCGTCGT
GATCTTCCCCTACATGCTGATAGAGGCATTCTGCTAAATGGCCGCCGCTG
TCGCCAACGGCCATACCACTTCCTCCGCCGATGTCGCCAAACAGCGCAGG
CTGATCCACCACCATGCCGATGTCGTGATTGTAGGCGCCGGGATCCTAGG
TTGTGCATTGGCGGTCGCACTTGGAAGACAAGGGCGCAGCGTCCTGCTGC
TGGAGGCGTCCATGAAGGAGCCTGACCGGATCGTGGGAGAGTTACTACAG
CCTGGCGGTGTCGAGGCGCTTGAGAAACTGGGTCTTGCTGATTGTCTCGA
AGACATTGATGCCATCCCAGCGAAAGGCTACCATGTGACATACTTTGGGA
AACCCGTCTCGTTCACCTACCCCAAAGCCTCCCCGTCGTCGCCCGCCCCG
CAAGGGTGTTGTTTCCACCATGGCCGCTTCGTCATGAAGCTGCGAGCTGC
TGCGCTGGCCTGCCCCAATGTCACAGTGGTGGAGACCAAGGCCACCGACT
TGGTCACTTGCTCCCACACCAAGCAGGTTCTTGGTGTCGAGTGTGTGACC
GGCGACATGAAGGATTGCTACTTTGGCCATCTTACGGTGGTGGCCGATGG
CTACGCCTCCAAACTCCGCAAGCAATACCATTCCAATACTCCCAAGGTCC
GCTCCAGGTTCTGGGGCTTGGAATTGATCGATGCAGACCTTCCCAAGCCT
TATCATGGCCACGTCCTCCTTAGCGACAATGCCCCTATCCTCGTCTACCA
AATTGGCACCCATGAAACCCGCATCCTCATCGACATCCCAGAGAACCTCC
CGTCGGCCTCCGTCAAGAACGGCGGCGTCAAGAACCACCTTCGCAACGTC
GTTCTCCCGTCCCTTCCCGAATGCATTCAGCCTTCATTCGTGGCTGCGTT
GGACAAAGGTCAGCTGCGGTCAATGCCGAACTCATATCTGCCTAGTACCC
CGAACAAGACTCCCGGTCTGGTCATCCTGGGCGATGCGCTCAACATGCGG
CATCCGCTGACCGGTGGAGGAATGACCGTCGCATTCAACGACGTTGTGGT
CCTTCGTGATCTGCTGAGTCCGGAGAAGGTCCCTTCCCTCGCTAATCATG
AGCGCGTCCTGCAACAGCTGTCCTCCTTCCGTTGGCAACGGAAGAAAACA
TGTTCAGTCATCAACATTTTGGCGCAGGCTCTCTATGCCTTGTTTGCTGC
TAAAGACGAGAATATGCGTGCTCTCCAACGGGGCTGCTTCCGTTACTTTG
AGTTAGGAATGACCAGCGGGCCCATAGGCCTTCTGGGTGGACTGATCAAA
AAGCCGGACGTTCTATTCTGGCATTTCTTCAGTGTCGCCTTTCTCTCTCT
GTGGCTCGTCATCACCGAGCCACCTTTCTACAAGCTGCCTCTGGCTTTGT
TGAAATGCATTATGGTCTTTTGGACAGCATGCGTCGTGATCTTCCCCTAC
ATGCTGATAGAGGCATTCTGCTAA
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Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Cellular Component
TermDefinition
GO:0016021integral component of membrane
Vocabulary: Molecular Function
TermDefinition
GO:0004506squalene monooxygenase activity
GO:0050660flavin adenine dinucleotide binding
Vocabulary: Biological Process
TermDefinition
GO:0055114oxidation-reduction process
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
ATCC64974_73840ATCC64974_73840Aspergillus niger N402gene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ATCC64974_73840-T1.exon1ATCC64974_73840-T1.exon1Aspergillus niger N402exon
ATCC64974_73840-T1.exon2ATCC64974_73840-T1.exon2Aspergillus niger N402exon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ATCC64974_73840-T1.cdsATCC64974_73840-T1.cdsAspergillus niger N402CDS


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
ATCC64974_73840-T1ATCC64974_73840-T1-proteinAspergillus niger N402polypeptide


Properties
Property NameValue
NoteBUSCO:EOG09261M4S
DBxrefInterPro:IPR013698
DBxrefInterPro:IPR036188
DBxrefPFAM:PF08491
DBxrefPFAM:PF01494
Producthypothetical protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger N402 whole genome analysis2021-11-01
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
OGUI01000013.1supercontigOGUI01000013.1:4434..5948 +
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