You are here

Home

ATCC64974_73880-T1, ATCC64974_73880-T1 (mRNA) Aspergillus niger N402

Overview
NameATCC64974_73880-T1
Unique NameATCC64974_73880-T1
TypemRNA
OrganismAspergillus niger N402
Sequences
The following sequences are available for this feature:

mRNA from alignment at OGUI01000013.1:23071..24490-

Legend: polypeptideCDSexon
Hold the cursor over a type above to highlight its positions in the sequence below.
>ATCC64974_73880-T1 ID=ATCC64974_73880-T1|Name=ATCC64974_73880-T1|organism=Aspergillus niger N402|type=mRNA|length=1420bp|location=Sequence derived from alignment at OGUI01000013.1:23071..24490- (Aspergillus niger N402)
ATGTCCGATACCAAGGCTCGGCTTGCCGCTCAGAGATCCTCTCCACTCCC
CGCTAGTTACATACCTGTAGCTCAATCCCCGGAGCAGGTTGCTCCCACAT
TAGAGGCTCCTCAGAGCGGAGACACCCTACCAGAAGTGCCTGCCACGCAT
GTCGAAAAACAAGACAACGTCCTTGCATACCTCGCGACAAAAGAGTTCTA
CATTACCCTTTTCCTCGGGTGAGTTATACAGTTGGAAACGCTTGAAGCAC
CAAGGTGTGGTCGATGGTTAACTTGTCACACAGACAGGTTCTGGCTATCA
CCAACACTGCCTGTAGCACATTCAGCACACTACTGGTCAGCGAGGGAACC
TCAATCCCGGCTTTTCAGACATTCTTCAACTACTTTCTGCTCAATGCTAT
CTTCACCCCATATACCATATACTGTTATGGCCTGAAAGGCTGGACACGGG
TAGTGCTTCAGCACGGTTGGAAATGTAAGCGTCGCTGTATACTATAAGAA
GCCCCCTCACCTCCCCACCAAGGCCTCTCTAATTGCGGTCTTGGATAGAT
ATAATTTTGGCCTTCTGCGACGTGGAAGGTAACTATTTCATTGTGCTGGC
CTATCGCCATACGACTATGCTGAGCGCCCAGTTGATAAATTTCTGGGCCA
TTGCGGTCGTGCTCATTGTGTCCTTCACAATCTTGCGCGTGCGTTACCAT
ATCACACAGGTGTTAGGTATTATGATCTGTATTGGCGGCATGGGCTTCCT
GATTGCTTCGGACCGGATCACTGGTGCCGATGACGGGAACTATTCGCGCG
CCGATTTGATCAAAGGCGACCTCTTCGCACTTTTGGGCGCGACATTCTAC
GGACTTGCCAACACGGGTGAGGAGGTCTTTGTCAGTACGGCCCCGGTATA
CGAAGTTTTGGGCCAAATGGCCATGTACGGCATGGTCATAAATGGCGTCC
AGGCGGGCGTTTTCGACCGCAACTCGTTCCATAATGCGATCTGGAACTTC
CAGGTTGGTATCTACTTGACAGGATATACGCTGTGTCTTGCTTCCTTCTA
TTGTATGGTACCGCTGCTGTTCCGGCTGTCATCGGCGGCATTTTTCAACA
TATCGATGCTGACGATGAACTTCTGGGGTGTTCTCATCGGGGTCGGGGTG
TTTCACTACACAATCCACTGGATGTACCCGATTGCTTTCGCGCTCATTAT
CCTCGGGCAGCTCATCTACTATCTGGGGCGGCGCGTGCTGGGAGAAGCGC
GCAAACCCTGGCTGGGACGGAACCAAGAATGCGGCGTGTCGGGACTGTTT
ACAGCACGAAGAAAGATCGAGACCGCTGCCGGCCGGAGTCGCAGCGACTC
CATATCCACGGCTTGTTCAGAGCGTGATCCTATGCTACCACATGCCAGTG
TGGCTGAGGAAGCAGCTTAG
back to top

Coding sequence (CDS) from alignment at OGUI01000013.1:23071..24490-

>ATCC64974_73880-T1 ID=ATCC64974_73880-T1|Name=ATCC64974_73880-T1|organism=Aspergillus niger N402|type=CDS|length=3843bp|location=Sequence derived from alignment at OGUI01000013.1:23071..24490- (Aspergillus niger N402)
ATATAATTTTGGCCTTCTGCGACGTGGAAGGTAACTATTTCATTGTGCTG
GCCTATCGCCATACGACTATGCTGAGCGCCCAGTTGATAAATTTCTGGGC
CATTGCGGTCGTGCTCATTGTGTCCTTCACAATCTTGCGCGTGCGTTACC
ATATCACACAGGTGTTAGGTATTATGATCTGTATTGGCGGCATGGGCTTC
CTGATTGCTTCGGACCGGATCACTGGTGCCGATGACGGGAACTATTCGCG
CGCCGATTTGATCAAAGGCGACCTCTTCGCACTTTTGGGCGCGACATTCT
ACGGACTTGCCAACACGGGTGAGGAGGTCTTTGTCAGTACGGCCCCGGTA
TACGAAGTTTTGGGCCAAATGGCCATGTACGGCATGGTCATAAATGGCGT
CCAGGCGGGCGTTTTCGACCGCAACTCGTTCCATAATGCGATCTGGAACT
TCCAGGTTGGTATCTACTTGACAGGATATACGCTGTGTCTTGCTTCCTTC
TATTGTATGGTACCGCTGCTGTTCCGGCTGTCATCGGCGGCATTTTTCAA
CATATCGATGCTGACGATGAACTTCTGGGGTGTTCTCATCGGGGTCGGGG
TGTTTCACTACACAATCCACTGGATGTACCCGATTGCTTTCGCGCTCATT
ATCCTCGGGCAGCTCATCTACTATCTGGGGCGGCGCGTGCTGGGAGAAGC
GCGCAAACCCTGGCTGGGACGGAACCAAGAATGCGGCGTGTCGGGACTGT
TTACAGCACGAAGAAAGATCGAGACCGCTGCCGGCCGGAGTCGCAGCGAC
TCCATATCCACGGCTTGTTCAGAGCGTGATCCTATGCTACCACATGCCAG
TGTGGCTGAGGAAGCAGCTTAGACAGGTTCTGGCTATCACCAACACTGCC
TGTAGCACATTCAGCACACTACTGGTCAGCGAGGGAACCTCAATCCCGGC
TTTTCAGACATTCTTCAACTACTTTCTGCTCAATGCTATCTTCACCCCAT
ATACCATATACTGTTATGGCCTGAAAGGCTGGACACGGGTAGTGCTTCAG
CACGGTTGGAAATATGTCCGATACCAAGGCTCGGCTTGCCGCTCAGAGAT
CCTCTCCACTCCCCGCTAGTTACATACCTGTAGCTCAATCCCCGGAGCAG
GTTGCTCCCACATTAGAGGCTCCTCAGAGCGGAGACACCCTACCAGAAGT
GCCTGCCACGCATGTCGAAAAACAAGACAACGTCCTTGCATACCTCGCGA
CAAAAGAGTTCTACATTACCCTTTTCCTCGGATATAATTTTGGCCTTCTG
CGACGTGGAAGGTAACTATTTCATTGTGCTGGCCTATCGCCATACGACTA
TGCTGAGCGCCCAGTTGATAAATTTCTGGGCCATTGCGGTCGTGCTCATT
GTGTCCTTCACAATCTTGCGCGTGCGTTACCATATCACACAGGTGTTAGG
TATTATGATCTGTATTGGCGGCATGGGCTTCCTGATTGCTTCGGACCGGA
TCACTGGTGCCGATGACGGGAACTATTCGCGCGCCGATTTGATCAAAGGC
GACCTCTTCGCACTTTTGGGCGCGACATTCTACGGACTTGCCAACACGGG
TGAGGAGGTCTTTGTCAGTACGGCCCCGGTATACGAAGTTTTGGGCCAAA
TGGCCATGTACGGCATGGTCATAAATGGCGTCCAGGCGGGCGTTTTCGAC
CGCAACTCGTTCCATAATGCGATCTGGAACTTCCAGGTTGGTATCTACTT
GACAGGATATACGCTGTGTCTTGCTTCCTTCTATTGTATGGTACCGCTGC
TGTTCCGGCTGTCATCGGCGGCATTTTTCAACATATCGATGCTGACGATG
AACTTCTGGGGTGTTCTCATCGGGGTCGGGGTGTTTCACTACACAATCCA
CTGGATGTACCCGATTGCTTTCGCGCTCATTATCCTCGGGCAGCTCATCT
ACTATCTGGGGCGGCGCGTGCTGGGAGAAGCGCGCAAACCCTGGCTGGGA
CGGAACCAAGAATGCGGCGTGTCGGGACTGTTTACAGCACGAAGAAAGAT
CGAGACCGCTGCCGGCCGGAGTCGCAGCGACTCCATATCCACGGCTTGTT
CAGAGCGTGATCCTATGCTACCACATGCCAGTGTGGCTGAGGAAGCAGCT
TAGACAGGTTCTGGCTATCACCAACACTGCCTGTAGCACATTCAGCACAC
TACTGGTCAGCGAGGGAACCTCAATCCCGGCTTTTCAGACATTCTTCAAC
TACTTTCTGCTCAATGCTATCTTCACCCCATATACCATATACTGTTATGG
CCTGAAAGGCTGGACACGGGTAGTGCTTCAGCACGGTTGGAAATATGTCC
GATACCAAGGCTCGGCTTGCCGCTCAGAGATCCTCTCCACTCCCCGCTAG
TTACATACCTGTAGCTCAATCCCCGGAGCAGGTTGCTCCCACATTAGAGG
CTCCTCAGAGCGGAGACACCCTACCAGAAGTGCCTGCCACGCATGTCGAA
AAACAAGACAACGTCCTTGCATACCTCGCGACAAAAGAGTTCTACATTAC
CCTTTTCCTCGGATATAATTTTGGCCTTCTGCGACGTGGAAGGTAACTAT
TTCATTGTGCTGGCCTATCGCCATACGACTATGCTGAGCGCCCAGTTGAT
AAATTTCTGGGCCATTGCGGTCGTGCTCATTGTGTCCTTCACAATCTTGC
GCGTGCGTTACCATATCACACAGGTGTTAGGTATTATGATCTGTATTGGC
GGCATGGGCTTCCTGATTGCTTCGGACCGGATCACTGGTGCCGATGACGG
GAACTATTCGCGCGCCGATTTGATCAAAGGCGACCTCTTCGCACTTTTGG
GCGCGACATTCTACGGACTTGCCAACACGGGTGAGGAGGTCTTTGTCAGT
ACGGCCCCGGTATACGAAGTTTTGGGCCAAATGGCCATGTACGGCATGGT
CATAAATGGCGTCCAGGCGGGCGTTTTCGACCGCAACTCGTTCCATAATG
CGATCTGGAACTTCCAGGTTGGTATCTACTTGACAGGATATACGCTGTGT
CTTGCTTCCTTCTATTGTATGGTACCGCTGCTGTTCCGGCTGTCATCGGC
GGCATTTTTCAACATATCGATGCTGACGATGAACTTCTGGGGTGTTCTCA
TCGGGGTCGGGGTGTTTCACTACACAATCCACTGGATGTACCCGATTGCT
TTCGCGCTCATTATCCTCGGGCAGCTCATCTACTATCTGGGGCGGCGCGT
GCTGGGAGAAGCGCGCAAACCCTGGCTGGGACGGAACCAAGAATGCGGCG
TGTCGGGACTGTTTACAGCACGAAGAAAGATCGAGACCGCTGCCGGCCGG
AGTCGCAGCGACTCCATATCCACGGCTTGTTCAGAGCGTGATCCTATGCT
ACCACATGCCAGTGTGGCTGAGGAAGCAGCTTAGACAGGTTCTGGCTATC
ACCAACACTGCCTGTAGCACATTCAGCACACTACTGGTCAGCGAGGGAAC
CTCAATCCCGGCTTTTCAGACATTCTTCAACTACTTTCTGCTCAATGCTA
TCTTCACCCCATATACCATATACTGTTATGGCCTGAAAGGCTGGACACGG
GTAGTGCTTCAGCACGGTTGGAAATATGTCCGATACCAAGGCTCGGCTTG
CCGCTCAGAGATCCTCTCCACTCCCCGCTAGTTACATACCTGTAGCTCAA
TCCCCGGAGCAGGTTGCTCCCACATTAGAGGCTCCTCAGAGCGGAGACAC
CCTACCAGAAGTGCCTGCCACGCATGTCGAAAAACAAGACAACGTCCTTG
CATACCTCGCGACAAAAGAGTTCTACATTACCCTTTTCCTCGG
back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Cellular Component
TermDefinition
GO:0016021integral component of membrane
Vocabulary: Molecular Function
TermDefinition
GO:0022857transmembrane transporter activity
Vocabulary: Biological Process
TermDefinition
GO:0055085transmembrane transport
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
ATCC64974_73880ATCC64974_73880Aspergillus niger N402gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
ATCC64974_73880-T1ATCC64974_73880-T1-proteinAspergillus niger N402polypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ATCC64974_73880-T1.cdsATCC64974_73880-T1.cdsAspergillus niger N402CDS


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ATCC64974_73880-T1.exon3ATCC64974_73880-T1.exon3Aspergillus niger N402exon
ATCC64974_73880-T1.exon2ATCC64974_73880-T1.exon2Aspergillus niger N402exon
ATCC64974_73880-T1.exon1ATCC64974_73880-T1.exon1Aspergillus niger N402exon


Properties
Property NameValue
DBxrefInterPro:IPR009262
DBxrefPFAM:PF06027
Producthypothetical protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger N402 whole genome analysis2021-11-01
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
OGUI01000013.1supercontigOGUI01000013.1:23071..24490 -
Powered by Drupal