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ATCC64974_73950-T1, ATCC64974_73950-T1 (mRNA) Aspergillus niger N402

Overview
NameATCC64974_73950-T1
Unique NameATCC64974_73950-T1
TypemRNA
OrganismAspergillus niger N402
Sequences
The following sequences are available for this feature:

mRNA from alignment at OGUI01000013.1:44881..45584-

Legend: polypeptideCDSexon
Hold the cursor over a type above to highlight its positions in the sequence below.
>ATCC64974_73950-T1 ID=ATCC64974_73950-T1|Name=ATCC64974_73950-T1|organism=Aspergillus niger N402|type=mRNA|length=704bp|location=Sequence derived from alignment at OGUI01000013.1:44881..45584- (Aspergillus niger N402)
ATGTCTGCCATTGCCTCAGCGCTGCGCCCTACCCTCCGCGCCTCCTCCGG CGCCGCCCTGTCCACGCGTTCCTTCAGCTCTTCCTCATCCCGTTCCATTG CTCGTATCATGATTACGGGTCGTCTGGCTGGCCAACCCGAGGTGCAGGCC ACCGCTTCTGGCCAAGAAGTCATCAGATACACCGTGGCCTCTAACCAGAA CTCGAAGGATAAGCGCCCGCCGAGCTTCTTCAAGGTGTCGGCCTTCAGTG AGGGAAACCAGCGCGAGTTCATCACCAACTTGCAGACGGGGTAAGTCTTC CTGCCCGTTAACTTTAATCTTTCCTTCGAACCGCAGATATGCGTGTTTGC TGTTTCATTTGTCTCCTCTGAATGCGGCGTTTAATTCACATCCTCTTCGG GTCTCACTATCCAATCCGCTAACTTTCTTTTCTTGTCACCAGTACTCTTG TGTTTGTCGAGGGAGACGCGACCATGCGCCAGTGGGAGAACGCAGAGGGC AAGAAGCAGACGGCCCTGAACATCACCCAGCGTACGTTATCGTCCACATC CGCCCCTTAAATCATGTGAAAACAAACTACATACTCCCTTATACTGTATT GCGGAAGTACTAATATGTCCTACTTATAATCCGCAGGCGCTCTTGAGGTC CTCAAGCGTCCATACAACCCTGAAGCCTTCTCTGAGGAGCAGCAGCAGGA GTAG
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Coding sequence (CDS) from alignment at OGUI01000013.1:44881..45584-

>ATCC64974_73950-T1 ID=ATCC64974_73950-T1|Name=ATCC64974_73950-T1|organism=Aspergillus niger N402|type=CDS|length=1341bp|location=Sequence derived from alignment at OGUI01000013.1:44881..45584- (Aspergillus niger N402)
GCGCTCTTGAGGTCCTCAAGCGTCCATACAACCCTGAAGCCTTCTCTGAG
GAGCAGCAGCAGGAGTAGTACTCTTGTGTTTGTCGAGGGAGACGCGACCA
TGCGCCAGTGGGAGAACGCAGAGGGCAAGAAGCAGACGGCCCTGAACATC
ACCCAGCATGTCTGCCATTGCCTCAGCGCTGCGCCCTACCCTCCGCGCCT
CCTCCGGCGCCGCCCTGTCCACGCGTTCCTTCAGCTCTTCCTCATCCCGT
TCCATTGCTCGTATCATGATTACGGGTCGTCTGGCTGGCCAACCCGAGGT
GCAGGCCACCGCTTCTGGCCAAGAAGTCATCAGATACACCGTGGCCTCTA
ACCAGAACTCGAAGGATAAGCGCCCGCCGAGCTTCTTCAAGGTGTCGGCC
TTCAGTGAGGGAAACCAGCGCGAGTTCATCACCAACTTGCAGACGGGGCG
CTCTTGAGGTCCTCAAGCGTCCATACAACCCTGAAGCCTTCTCTGAGGAG
CAGCAGCAGGAGTAGTACTCTTGTGTTTGTCGAGGGAGACGCGACCATGC
GCCAGTGGGAGAACGCAGAGGGCAAGAAGCAGACGGCCCTGAACATCACC
CAGCATGTCTGCCATTGCCTCAGCGCTGCGCCCTACCCTCCGCGCCTCCT
CCGGCGCCGCCCTGTCCACGCGTTCCTTCAGCTCTTCCTCATCCCGTTCC
ATTGCTCGTATCATGATTACGGGTCGTCTGGCTGGCCAACCCGAGGTGCA
GGCCACCGCTTCTGGCCAAGAAGTCATCAGATACACCGTGGCCTCTAACC
AGAACTCGAAGGATAAGCGCCCGCCGAGCTTCTTCAAGGTGTCGGCCTTC
AGTGAGGGAAACCAGCGCGAGTTCATCACCAACTTGCAGACGGGGCGCTC
TTGAGGTCCTCAAGCGTCCATACAACCCTGAAGCCTTCTCTGAGGAGCAG
CAGCAGGAGTAGTACTCTTGTGTTTGTCGAGGGAGACGCGACCATGCGCC
AGTGGGAGAACGCAGAGGGCAAGAAGCAGACGGCCCTGAACATCACCCAG
CATGTCTGCCATTGCCTCAGCGCTGCGCCCTACCCTCCGCGCCTCCTCCG
GCGCCGCCCTGTCCACGCGTTCCTTCAGCTCTTCCTCATCCCGTTCCATT
GCTCGTATCATGATTACGGGTCGTCTGGCTGGCCAACCCGAGGTGCAGGC
CACCGCTTCTGGCCAAGAAGTCATCAGATACACCGTGGCCTCTAACCAGA
ACTCGAAGGATAAGCGCCCGCCGAGCTTCTTCAAGGTGTCGGCCTTCAGT
GAGGGAAACCAGCGCGAGTTCATCACCAACTTGCAGACGGG
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Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Biological Process
TermDefinition
GO:0006260DNA replication
Vocabulary: Molecular Function
TermDefinition
GO:0003697single-stranded DNA binding
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
ATCC64974_73950ATCC64974_73950Aspergillus niger N402gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
ATCC64974_73950-T1ATCC64974_73950-T1-proteinAspergillus niger N402polypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ATCC64974_73950-T1.cdsATCC64974_73950-T1.cdsAspergillus niger N402CDS


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ATCC64974_73950-T1.exon3ATCC64974_73950-T1.exon3Aspergillus niger N402exon
ATCC64974_73950-T1.exon2ATCC64974_73950-T1.exon2Aspergillus niger N402exon
ATCC64974_73950-T1.exon1ATCC64974_73950-T1.exon1Aspergillus niger N402exon


Properties
Property NameValue
NoteEggNog:ENOG41
NoteBUSCO:EOG09265JNA
DBxrefInterPro:IPR012340
DBxrefInterPro:IPR000424
DBxrefInterPro:IPR011344
DBxrefPFAM:PF00436
Producthypothetical protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger N402 whole genome analysis2021-11-01
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
OGUI01000013.1supercontigOGUI01000013.1:44881..45584 -