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ATCC64974_7550-T1, ATCC64974_7550-T1 (mRNA) Aspergillus niger N402

Overview
NameATCC64974_7550-T1
Unique NameATCC64974_7550-T1
TypemRNA
OrganismAspergillus niger N402
Sequences
The following sequences are available for this feature:

mRNA from alignment at OGUI01000002.1:46247..47374+

Legend: exonpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>ATCC64974_7550-T1 ID=ATCC64974_7550-T1|Name=ATCC64974_7550-T1|organism=Aspergillus niger N402|type=mRNA|length=1128bp|location=Sequence derived from alignment at OGUI01000002.1:46247..47374+ (Aspergillus niger N402)
ATGATCAATATGTGTTCAAAACGAAAATCAGTATTTTCGCTACCCTCTGA
TAGCGAAAAAAAGAAAGCAAAGGTAAACATAAATGCTCGTTTATCTCGGC
TTACACTGACATCTTGGAAGTACAATGATGACTTGCAGCTTGCGAAAGAT
TCAATCCCCTCCACCCACAGCCCGCAAAGCAAAGAGAATAATTTCGTCCT
TCTGAGAACATTGCTTCAGGATATTATACAGAGCCACGGCGATACTCAAA
GCCACGGATCCCAGACCGACACCGATATCTTTACTGCAGCTACTGAGCTC
GACGCTGCATTACAGCGTGCAGCAGGTACCATAAAATCTACTACCAAACC
CTATGAGGGTGCAACACTAGCGCTAGAGACATCGGAAGCCAATGTGGAGT
GTTCTTTGCCCCCTTTACCTCCAATATTGGATGACATGCTTGAGAGGGCA
GTTTTCACACACCCGGGTGTCAGCAACAACTCCGGAGCTACTTACGATCG
GCTCGAGGTTCTTGGAGATGCATATATTGAACTTATCTCCACGAAGCTCA
TCTGGGACAGATTCCAGGATATTCCTTCGGGTCAAATATCTCAAATACGC
GAGAGACTTGTAAAGAATGAGACACTGTCTGATTATGCGTCTAAGTACGG
ACTCGACAGCAGGGCTTCCGTACCTCCGGACTATCGGAAGCAACCCAAAA
GATGGCTTAAAACCAAGGCGGACATCTTTGAGGCTTATGTAGCTGCCGTT
GTCCTGTCAGATACCAGCAATGGTTATTGTGTGGCTGAAGAATGGCTAAG
ACAATTGTGGTCTCCGAAGCTTGAAAAGCTTGAAAAACCAAAATCCGCCT
TGCATGCCAAAGAAGCACTCGCAAAGAAAATCATGGGCAAGGGGATTAAG
CTCAATTACATCGATGAGCGCCCTCCTGCTCAGCGCGGCAGGGGGCTACA
GACATATTTTATCGGAGTTTATCTCACTGGCTGGGGCTGGAACCATAAGC
ACCTTGGCTCTGGTCAAGGTTCTAATAAAGCAATTGCAGGAAATGAGGCG
GCCGAGCAGGCATTGTTAAATGAACCTCTAATCGAAAAGATCATGGAAGT
TAAGAAAGCACATCTAGCACAAAGATAA
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Coding sequence (CDS) from alignment at OGUI01000002.1:46247..47374+

>ATCC64974_7550-T1 ID=ATCC64974_7550-T1|Name=ATCC64974_7550-T1|organism=Aspergillus niger N402|type=CDS|length=2160bp|location=Sequence derived from alignment at OGUI01000002.1:46247..47374+ (Aspergillus niger N402)
ATGATCAATATGTGTTCAAAACGAAAATCAGTATTTTCGCTACCCTCTGA
TAGCGAAAAAAAGAAAGCAAAGTACAATGATGACTTGCAGCTTGCGAAAG
ATTCAATCCCCTCCACCCACAGCCCGCAAAGCAAAGAGAATAATTTCGTC
CTTCTGAGAACATTGCTTCAGGATATTATACAGAGCCACGGCGATACTCA
AAGCCACGGATCCCAGACCGACACCGATATCTTTACTGCAGCTACTGAGC
TCGACGCTGCATTACAGCGTGCAGCAGGTACCATAAAATCTACTACCAAA
CCCTATGAGGGTGCAACACTAGCGCTAGAGACATCGGAAGCCAATGTGGA
GTGTTCTTTGCCCCCTTTACCTCCAATATTGGATGACATGCTTGAGAGGG
CAGTTTTCACACACCCGGGTGTCAGCAACAACTCCGGAGCTACTTACGAT
CGGCTCGAGGTTCTTGGAGATGCATATATTGAACTTATCTCCACGAAGCT
CATCTGGGACAGATTCCAGGATATTCCTTCGGGTCAAATATCTCAAATAC
GCGAGAGACTTGTAAAGAATGAGACACTGTCTGATTATGCGTCTAAGTAC
GGACTCGACAGCAGGGCTTCCGTACCTCCGGACTATCGGAAGCAACCCAA
AAGATGGCTTAAAACCAAGGCGGACATCTTTGAGGCTTATGTAGCTGCCG
TTGTCCTGTCAGATACCAGCAATGGTTATTGTGTGGCTGAAGAATGGCTA
AGACAATTGTGGTCTCCGAAGCTTGAAAAGCTTGAAAAACCAAAATCCGC
CTTGCATGCCAAAGAAGCACTCGCAAAGAAAATCATGGGCAAGGGGATTA
AGCTCAATTACATCGATGAGCGCCCTCCTGCTCAGCGCGGCAGGGGGCTA
CAGACATATTTTATCGGAGTTTATCTCACTGGCTGGGGCTGGAACCATAA
GCACCTTGGCTCTGGTCAAGGTTCTAATAAAGCAATTGCAGGAAATGAGG
CGGCCGAGCAGGCATTGTTAAATGAACCTCTAATCGAAAAGATCATGGAA
GTTAAGAAAGCACATCTAGCACAAAGATAAATGATCAATATGTGTTCAAA
ACGAAAATCAGTATTTTCGCTACCCTCTGATAGCGAAAAAAAGAAAGCAA
AGTACAATGATGACTTGCAGCTTGCGAAAGATTCAATCCCCTCCACCCAC
AGCCCGCAAAGCAAAGAGAATAATTTCGTCCTTCTGAGAACATTGCTTCA
GGATATTATACAGAGCCACGGCGATACTCAAAGCCACGGATCCCAGACCG
ACACCGATATCTTTACTGCAGCTACTGAGCTCGACGCTGCATTACAGCGT
GCAGCAGGTACCATAAAATCTACTACCAAACCCTATGAGGGTGCAACACT
AGCGCTAGAGACATCGGAAGCCAATGTGGAGTGTTCTTTGCCCCCTTTAC
CTCCAATATTGGATGACATGCTTGAGAGGGCAGTTTTCACACACCCGGGT
GTCAGCAACAACTCCGGAGCTACTTACGATCGGCTCGAGGTTCTTGGAGA
TGCATATATTGAACTTATCTCCACGAAGCTCATCTGGGACAGATTCCAGG
ATATTCCTTCGGGTCAAATATCTCAAATACGCGAGAGACTTGTAAAGAAT
GAGACACTGTCTGATTATGCGTCTAAGTACGGACTCGACAGCAGGGCTTC
CGTACCTCCGGACTATCGGAAGCAACCCAAAAGATGGCTTAAAACCAAGG
CGGACATCTTTGAGGCTTATGTAGCTGCCGTTGTCCTGTCAGATACCAGC
AATGGTTATTGTGTGGCTGAAGAATGGCTAAGACAATTGTGGTCTCCGAA
GCTTGAAAAGCTTGAAAAACCAAAATCCGCCTTGCATGCCAAAGAAGCAC
TCGCAAAGAAAATCATGGGCAAGGGGATTAAGCTCAATTACATCGATGAG
CGCCCTCCTGCTCAGCGCGGCAGGGGGCTACAGACATATTTTATCGGAGT
TTATCTCACTGGCTGGGGCTGGAACCATAAGCACCTTGGCTCTGGTCAAG
GTTCTAATAAAGCAATTGCAGGAAATGAGGCGGCCGAGCAGGCATTGTTA
AATGAACCTCTAATCGAAAAGATCATGGAAGTTAAGAAAGCACATCTAGC
ACAAAGATAA
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Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Molecular Function
TermDefinition
GO:0004525ribonuclease III activity
Vocabulary: Biological Process
TermDefinition
GO:0006396RNA processing
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
ATCC64974_7550ATCC64974_7550Aspergillus niger N402gene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ATCC64974_7550-T1.exon1ATCC64974_7550-T1.exon1Aspergillus niger N402exon
ATCC64974_7550-T1.exon2ATCC64974_7550-T1.exon2Aspergillus niger N402exon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ATCC64974_7550-T1.cdsATCC64974_7550-T1.cdsAspergillus niger N402CDS


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
ATCC64974_7550-T1ATCC64974_7550-T1-proteinAspergillus niger N402polypeptide


Properties
Property NameValue
DBxrefInterPro:IPR036389
DBxrefInterPro:IPR000999
DBxrefPFAM:PF14622
DBxrefPFAM:PF00636
Producthypothetical protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger N402 whole genome analysis2021-11-01
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
OGUI01000002.1supercontigOGUI01000002.1:46247..47374 +
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