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ATCC64974_75590-T1, ATCC64974_75590-T1 (mRNA) Aspergillus niger N402

Overview
NameATCC64974_75590-T1
Unique NameATCC64974_75590-T1
TypemRNA
OrganismAspergillus niger N402
Sequences
The following sequences are available for this feature:

mRNA from alignment at OGUI01000013.1:557872..558685-

Legend: polypeptideCDSexon
Hold the cursor over a type above to highlight its positions in the sequence below.
>ATCC64974_75590-T1 ID=ATCC64974_75590-T1|Name=ATCC64974_75590-T1|organism=Aspergillus niger N402|type=mRNA|length=814bp|location=Sequence derived from alignment at OGUI01000013.1:557872..558685- (Aspergillus niger N402)
ATGCCTCCGCGACGAGCCCATACGAAGTCCCGGAACGGATGCGACCAGTG
CAAAACTCGGCGAGTCAAAGTGCGTTGCCCGCTCTCCAGCCTGGAATTTC
CGCTGATCCCCACAGTGCGATGAAGCCCAGCCATGTGCCAACTGCGTGAA
ACGACACCTGACGTGCACCTTTGAACGTCGTCCAACTAAATCCGAGCCGT
ATCCCAGTACGCAGTCCGCCAAATTGTCCGAGTCGCCGACCGTTTCGTCG
AGAACAGACGATGCCATTGCCGCCTTTCAGCATCAAGTCGCGGATGCATC
TGCTTTCCTCCGCGAGTGGGGCGCGCAGGACCCCGAATTGATGCATCATT
ACTGTATCTACGCCGCAAAGACTCTGTCAGATCGGGAGGCGATCCGCGAT
GTTTGGCAGATTGAAGTGCCGAAAATTGCCTATTCGTACGAATTCCTCAT
GCATGGCATCTTGTCGCTGTCGGCCCTGCACTTGGCCTACACTAGACCCG
AAAGATACAGCCACTATCTCAACAGCTCCAACTTCCACATGGCACTGGGC
CTGCAAACATTCCGCATAATATTACAGAACCCTAACAAACAGAATTGTGA
GGCACTATTCTGCTTCTCAAGTCTAATCATGGTTTGGACCTGTGGAGCAC
CGACCGATCTGGGTGATAGCCGTCCCTTGGAAAGTATCATCCGCCTTTTC
AACTTGTGCAGGGGGATCATGACCCTTCATCCTTTTATGTCGCACGTTGA
AAACGGTCCTCTAGCGCCATTGTTTCTAAAAGACTTTCGATCCGACCCTG
GCCCGTCCCAGTAA
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Coding sequence (CDS) from alignment at OGUI01000013.1:557872..558685-

>ATCC64974_75590-T1 ID=ATCC64974_75590-T1|Name=ATCC64974_75590-T1|organism=Aspergillus niger N402|type=CDS|length=1536bp|location=Sequence derived from alignment at OGUI01000013.1:557872..558685- (Aspergillus niger N402)
TGCGATGAAGCCCAGCCATGTGCCAACTGCGTGAAACGACACCTGACGTG
CACCTTTGAACGTCGTCCAACTAAATCCGAGCCGTATCCCAGTACGCAGT
CCGCCAAATTGTCCGAGTCGCCGACCGTTTCGTCGAGAACAGACGATGCC
ATTGCCGCCTTTCAGCATCAAGTCGCGGATGCATCTGCTTTCCTCCGCGA
GTGGGGCGCGCAGGACCCCGAATTGATGCATCATTACTGTATCTACGCCG
CAAAGACTCTGTCAGATCGGGAGGCGATCCGCGATGTTTGGCAGATTGAA
GTGCCGAAAATTGCCTATTCGTACGAATTCCTCATGCATGGCATCTTGTC
GCTGTCGGCCCTGCACTTGGCCTACACTAGACCCGAAAGATACAGCCACT
ATCTCAACAGCTCCAACTTCCACATGGCACTGGGCCTGCAAACATTCCGC
ATAATATTACAGAACCCTAACAAACAGAATTGTGAGGCACTATTCTGCTT
CTCAAGTCTAATCATGGTTTGGACCTGTGGAGCACCGACCGATCTGGGTG
ATAGCCGTCCCTTGGAAAGTATCATCCGCCTTTTCAACTTGTGCAGGGGG
ATCATGACCCTTCATCCTTTTATGTCGCACGTTGAAAACGGTCCTCTAGC
GCCATTGTTTCTAAAAGACTTTCGATCCGACCCTGGCCCGTCCCAGTAAA
TGCCTCCGCGACGAGCCCATACGAAGTCCCGGAACGGATGCGACCAGTGC
AAAACTCGGCGAGTCAAATGCGATGAAGCCCAGCCATGTGCCAACTGCGT
GAAACGACACCTGACGTGCACCTTTGAACGTCGTCCAACTAAATCCGAGC
CGTATCCCAGTACGCAGTCCGCCAAATTGTCCGAGTCGCCGACCGTTTCG
TCGAGAACAGACGATGCCATTGCCGCCTTTCAGCATCAAGTCGCGGATGC
ATCTGCTTTCCTCCGCGAGTGGGGCGCGCAGGACCCCGAATTGATGCATC
ATTACTGTATCTACGCCGCAAAGACTCTGTCAGATCGGGAGGCGATCCGC
GATGTTTGGCAGATTGAAGTGCCGAAAATTGCCTATTCGTACGAATTCCT
CATGCATGGCATCTTGTCGCTGTCGGCCCTGCACTTGGCCTACACTAGAC
CCGAAAGATACAGCCACTATCTCAACAGCTCCAACTTCCACATGGCACTG
GGCCTGCAAACATTCCGCATAATATTACAGAACCCTAACAAACAGAATTG
TGAGGCACTATTCTGCTTCTCAAGTCTAATCATGGTTTGGACCTGTGGAG
CACCGACCGATCTGGGTGATAGCCGTCCCTTGGAAAGTATCATCCGCCTT
TTCAACTTGTGCAGGGGGATCATGACCCTTCATCCTTTTATGTCGCACGT
TGAAAACGGTCCTCTAGCGCCATTGTTTCTAAAAGACTTTCGATCCGACC
CTGGCCCGTCCCAGTAAATGCCTCCGCGACGAGCCCATACGAAGTCCCGG
AACGGATGCGACCAGTGCAAAACTCGGCGAGTCAAA
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Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Cellular Component
TermDefinition
GO:0005634nucleus
Vocabulary: Molecular Function
TermDefinition
GO:0000981DNA-binding transcription factor activity, RNA polymerase II-specific
GO:0008270zinc ion binding
Vocabulary: Biological Process
TermDefinition
GO:0006355regulation of transcription, DNA-templated
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
ATCC64974_75590ATCC64974_75590Aspergillus niger N402gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
ATCC64974_75590-T1ATCC64974_75590-T1-proteinAspergillus niger N402polypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ATCC64974_75590-T1.cdsATCC64974_75590-T1.cdsAspergillus niger N402CDS


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ATCC64974_75590-T1.exon2ATCC64974_75590-T1.exon2Aspergillus niger N402exon
ATCC64974_75590-T1.exon1ATCC64974_75590-T1.exon1Aspergillus niger N402exon


Properties
Property NameValue
NoteantiSMASH:Cluster_10000131.5
NoteEggNog:ENOG41
DBxrefInterPro:IPR036864
DBxrefInterPro:IPR021858
DBxrefInterPro:IPR001138
DBxrefPFAM:PF00172
Producthypothetical protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger N402 whole genome analysis2021-11-01
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
OGUI01000013.1supercontigOGUI01000013.1:557872..558685 -
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