You are here

Home

ATCC64974_75990-T1, ATCC64974_75990-T1 (mRNA) Aspergillus niger N402

Overview
NameATCC64974_75990-T1
Unique NameATCC64974_75990-T1
TypemRNA
OrganismAspergillus niger N402
Sequences
The following sequences are available for this feature:

mRNA from alignment at OGUI01000013.1:687522..689076-

Legend: polypeptideCDSexon
Hold the cursor over a type above to highlight its positions in the sequence below.
>ATCC64974_75990-T1 ID=ATCC64974_75990-T1|Name=ATCC64974_75990-T1|organism=Aspergillus niger N402|type=mRNA|length=1555bp|location=Sequence derived from alignment at OGUI01000013.1:687522..689076- (Aspergillus niger N402)
ATGTCTGCGCAACCTGCTCACCTGTGTTTCCGCTCCTTCGTCGAAGCCCT
CAAGGTCGACAACGACCTTGTTGAAATCAATACCCCAATTGACCCCAATC
TCGAAGCTGCTGCTATTACCCGCCGAGTATGTGAGACCAACGACAAGGCT
CCTTTATTCAACAACCTCATCGGCATGAAAAATGGCCTCTTCCGTATACT
TGGGGCTCCTGGCTCTCTCAGGAAGTCGTCTGCTGATCGCTACGGCCGCC
TTGCTCGTCACCTAGCCCTCCCACCTACGGCCTCAATGCGTGAGATTCTC
GATAAGATGCTCTCCGCCAGCGATATGCCTCCCATCCCTCCGACCATTGT
TCCCACCGGGCCATGCAAGGAGAACAGCTTAGATGACTCTGAATTCGACC
TTACCGAACTCCCCGTTCCTCTTATTCACAAATCGGATGGTGGTAAATAC
ATCCAAACCTATGGCATGCACATTGTGCAGTCTCCGGATGGAACCTGGAC
CAACTGGTCTATTGCCCGTGCGATGGTCCATGACAAGAACCATCTGACCG
GCCTGGTTATTCCCCCTCAGCACATCTGGCAGATTCACCAGATGTGGAAG
AAGGAAGGCCGCAGTGACGTTCCCTGGGCTTTGGCCTTTGGTGTCCCACC
CGCTGCCATTATGGCCTCTAGCATGCCTATTCCCGATGGTGTCACCGAAG
CTGGGTACGTGGGAGCTATGACGGGATCCTCCCTGGAGCTTGTTAAATGT
GATACGAACGATCTATATGTCCCCGCTACCTCAGAAATCGTTCTCGAGGG
CACACTCTCTATCAGCGAGACAGGCCCAGAGGGACCTTTCGGTGAGATGC
ATGGTTACATCTTCCCCGGGGATACTCACCTCGGCGCCAAATACAAGGTT
AACCGGATCACCTACCGCAACAACGCCATCATGCCCATGTCTTCTTGTGG
CCGCTTGACGGATGAAACGGTAAGTTTAGTCCCTGTCCTGCCATTTATAG
CCAAGGACTAACACGGTCTAGCACACCATGATCGGCTCTCTGGCTGCGGC
GGAGATCCGTAAGCTCTGCCAGCAGAATGACCTCCCTATCACTGATGCCT
TCGCTCCTTTCGAGTCTCAAGTTACCTGGGTTGCTCTGCGGGTCGATACT
GAGAAGCTACGTGCCATGAAGACAACGTCTGAGGGATTCCGCAAGAGAGT
GGGAGACGTCGTCTTCAACCACAAGGCCGGATACACCATTCATCGTCTGG
TGTTGGTCGGTGACGACATTGATGTCTATGAAGGAAAGGATGTGCTCTGG
GCGTTCTCCACCCGTTGCCGTCCTGGTATGGACGAGACTTTGTTTGAGGA
TGTTCGTGGGTTCCCCTTGATTCCGTATATGGGACACGGGAATGGGCCCG
CCCACCGCGGCGGAAAGGTTGTGTCCGACGCTCTTATGCCGACTGAGTAC
ACCACTGGTCGCAACTGGGAGGCTGCTGACTTCAACCAATCTTATCCCGA
GGATCTGAAGCAGAAGGTGTTGGACAACTGGACGAAGATGGGTTTCAGCA
ACTAA
back to top

Coding sequence (CDS) from alignment at OGUI01000013.1:687522..689076-

>ATCC64974_75990-T1 ID=ATCC64974_75990-T1|Name=ATCC64974_75990-T1|organism=Aspergillus niger N402|type=CDS|length=3006bp|location=Sequence derived from alignment at OGUI01000013.1:687522..689076- (Aspergillus niger N402)
CACACCATGATCGGCTCTCTGGCTGCGGCGGAGATCCGTAAGCTCTGCCA
GCAGAATGACCTCCCTATCACTGATGCCTTCGCTCCTTTCGAGTCTCAAG
TTACCTGGGTTGCTCTGCGGGTCGATACTGAGAAGCTACGTGCCATGAAG
ACAACGTCTGAGGGATTCCGCAAGAGAGTGGGAGACGTCGTCTTCAACCA
CAAGGCCGGATACACCATTCATCGTCTGGTGTTGGTCGGTGACGACATTG
ATGTCTATGAAGGAAAGGATGTGCTCTGGGCGTTCTCCACCCGTTGCCGT
CCTGGTATGGACGAGACTTTGTTTGAGGATGTTCGTGGGTTCCCCTTGAT
TCCGTATATGGGACACGGGAATGGGCCCGCCCACCGCGGCGGAAAGGTTG
TGTCCGACGCTCTTATGCCGACTGAGTACACCACTGGTCGCAACTGGGAG
GCTGCTGACTTCAACCAATCTTATCCCGAGGATCTGAAGCAGAAGGTGTT
GGACAACTGGACGAAGATGGGTTTCAGCAACTAAATGTCTGCGCAACCTG
CTCACCTGTGTTTCCGCTCCTTCGTCGAAGCCCTCAAGGTCGACAACGAC
CTTGTTGAAATCAATACCCCAATTGACCCCAATCTCGAAGCTGCTGCTAT
TACCCGCCGAGTATGTGAGACCAACGACAAGGCTCCTTTATTCAACAACC
TCATCGGCATGAAAAATGGCCTCTTCCGTATACTTGGGGCTCCTGGCTCT
CTCAGGAAGTCGTCTGCTGATCGCTACGGCCGCCTTGCTCGTCACCTAGC
CCTCCCACCTACGGCCTCAATGCGTGAGATTCTCGATAAGATGCTCTCCG
CCAGCGATATGCCTCCCATCCCTCCGACCATTGTTCCCACCGGGCCATGC
AAGGAGAACAGCTTAGATGACTCTGAATTCGACCTTACCGAACTCCCCGT
TCCTCTTATTCACAAATCGGATGGTGGTAAATACATCCAAACCTATGGCA
TGCACATTGTGCAGTCTCCGGATGGAACCTGGACCAACTGGTCTATTGCC
CGTGCGATGGTCCATGACAAGAACCATCTGACCGGCCTGGTTATTCCCCC
TCAGCACATCTGGCAGATTCACCAGATGTGGAAGAAGGAAGGCCGCAGTG
ACGTTCCCTGGGCTTTGGCCTTTGGTGTCCCACCCGCTGCCATTATGGCC
TCTAGCATGCCTATTCCCGATGGTGTCACCGAAGCTGGGTACGTGGGAGC
TATGACGGGATCCTCCCTGGAGCTTGTTAAATGTGATACGAACGATCTAT
ATGTCCCCGCTACCTCAGAAATCGTTCTCGAGGGCACACTCTCTATCAGC
GAGACAGGCCCAGAGGGACCTTTCGGTGAGATGCATGGTTACATCTTCCC
CGGGGATACTCACCTCGGCGCCAAATACAAGGTTAACCGGATCACCTACC
GCAACAACGCCATCATGCCCATGTCTTCTTGTGGCCGCTTGACGGATGAA
ACGCACACCATGATCGGCTCTCTGGCTGCGGCGGAGATCCGTAAGCTCTG
CCAGCAGAATGACCTCCCTATCACTGATGCCTTCGCTCCTTTCGAGTCTC
AAGTTACCTGGGTTGCTCTGCGGGTCGATACTGAGAAGCTACGTGCCATG
AAGACAACGTCTGAGGGATTCCGCAAGAGAGTGGGAGACGTCGTCTTCAA
CCACAAGGCCGGATACACCATTCATCGTCTGGTGTTGGTCGGTGACGACA
TTGATGTCTATGAAGGAAAGGATGTGCTCTGGGCGTTCTCCACCCGTTGC
CGTCCTGGTATGGACGAGACTTTGTTTGAGGATGTTCGTGGGTTCCCCTT
GATTCCGTATATGGGACACGGGAATGGGCCCGCCCACCGCGGCGGAAAGG
TTGTGTCCGACGCTCTTATGCCGACTGAGTACACCACTGGTCGCAACTGG
GAGGCTGCTGACTTCAACCAATCTTATCCCGAGGATCTGAAGCAGAAGGT
GTTGGACAACTGGACGAAGATGGGTTTCAGCAACTAAATGTCTGCGCAAC
CTGCTCACCTGTGTTTCCGCTCCTTCGTCGAAGCCCTCAAGGTCGACAAC
GACCTTGTTGAAATCAATACCCCAATTGACCCCAATCTCGAAGCTGCTGC
TATTACCCGCCGAGTATGTGAGACCAACGACAAGGCTCCTTTATTCAACA
ACCTCATCGGCATGAAAAATGGCCTCTTCCGTATACTTGGGGCTCCTGGC
TCTCTCAGGAAGTCGTCTGCTGATCGCTACGGCCGCCTTGCTCGTCACCT
AGCCCTCCCACCTACGGCCTCAATGCGTGAGATTCTCGATAAGATGCTCT
CCGCCAGCGATATGCCTCCCATCCCTCCGACCATTGTTCCCACCGGGCCA
TGCAAGGAGAACAGCTTAGATGACTCTGAATTCGACCTTACCGAACTCCC
CGTTCCTCTTATTCACAAATCGGATGGTGGTAAATACATCCAAACCTATG
GCATGCACATTGTGCAGTCTCCGGATGGAACCTGGACCAACTGGTCTATT
GCCCGTGCGATGGTCCATGACAAGAACCATCTGACCGGCCTGGTTATTCC
CCCTCAGCACATCTGGCAGATTCACCAGATGTGGAAGAAGGAAGGCCGCA
GTGACGTTCCCTGGGCTTTGGCCTTTGGTGTCCCACCCGCTGCCATTATG
GCCTCTAGCATGCCTATTCCCGATGGTGTCACCGAAGCTGGGTACGTGGG
AGCTATGACGGGATCCTCCCTGGAGCTTGTTAAATGTGATACGAACGATC
TATATGTCCCCGCTACCTCAGAAATCGTTCTCGAGGGCACACTCTCTATC
AGCGAGACAGGCCCAGAGGGACCTTTCGGTGAGATGCATGGTTACATCTT
CCCCGGGGATACTCACCTCGGCGCCAAATACAAGGTTAACCGGATCACCT
ACCGCAACAACGCCATCATGCCCATGTCTTCTTGTGGCCGCTTGACGGAT
GAAACG
back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Molecular Function
TermDefinition
GO:0016831carboxy-lyase activity
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
FDC1ATCC64974_75990Aspergillus niger N402gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
ATCC64974_75990-T1ATCC64974_75990-T1-proteinAspergillus niger N402polypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ATCC64974_75990-T1.cdsATCC64974_75990-T1.cdsAspergillus niger N402CDS


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ATCC64974_75990-T1.exon2ATCC64974_75990-T1.exon2Aspergillus niger N402exon
ATCC64974_75990-T1.exon1ATCC64974_75990-T1.exon1Aspergillus niger N402exon


Properties
Property NameValue
DBxrefInterPro:IPR032903
DBxrefInterPro:IPR002830
DBxrefPFAM:PF01977
ProductFerulic acid decarboxylase 1
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger N402 whole genome analysis2021-11-01
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
OGUI01000013.1supercontigOGUI01000013.1:687522..689076 -
Powered by Drupal