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ATCC64974_7610-T1, ATCC64974_7610-T1 (mRNA) Aspergillus niger N402

Overview
NameATCC64974_7610-T1
Unique NameATCC64974_7610-T1
TypemRNA
OrganismAspergillus niger N402
Sequences
The following sequences are available for this feature:

mRNA from alignment at OGUI01000002.1:78497..79659-

Legend: polypeptideCDSexon
Hold the cursor over a type above to highlight its positions in the sequence below.
>ATCC64974_7610-T1 ID=ATCC64974_7610-T1|Name=ATCC64974_7610-T1|organism=Aspergillus niger N402|type=mRNA|length=1163bp|location=Sequence derived from alignment at OGUI01000002.1:78497..79659- (Aspergillus niger N402)
ATGGTCGATTCCGATGAAGAGTACATAGGAGAAATCTCTGAGGATGAGGA
TGAAAACAATCTTCTACCAGGGTCTCGCGGAGAGACTACGTCCGCATCCC
GCTCCAAGAGGAGAAAGCACCGTGGAGGCGCAGAATGGGAGGTCTCGAGA
ACATGGGAAACCTTAGTTGAAGGTGCCGACGGTACAATCAGCTCTACAGT
TGAAGGGCTTCTCGAGGCTGGGAAAAGGAAAAGGTAGGGTGTACTTTCAA
GCCGAGTTAGTCTCAGTTTTGATAACGGTTCGAGCTGAGTTCCATGTCTT
CGCGCTTGCAGGCTCCTCAGAGATACGACTCCTTTACAACGGGGTATAAT
CCGTCATCTCATCTTGATTATAGATCTGTCACAATCTATGACCGAGAAAG
ATCTCCGACCGACACGTTACTTATTGTCCTTACGGTATGCACAAGAGTTC
GTGAGGGAATTTTTCGAGCAAAATCCCATCTCTCAACTCGGCGTTCTTGG
CCTCAAAGATGGACTGGCGGTCAGAGTCAGTGATATGAGTGGAAACCCTA
CTGAGCATATTAGTGCCATCCAATCACTGCGAGACCAGGATCCGAAAGGT
CTTCCTAGTCTGCAAAATGGCTTCGAAATGGCTCGTGGTGCCTTGTTGTA
TGTCTTTTCCACGGTAGCGTCGTACACACTCAATGATAAGGTGGACTAAT
TTGTCTTGCAACAGCCATACTCCAAGCCATGGCACCCGTGAGATCTTCGT
CATTTTTGGCTCCCTCCTTTCCTCTGATCCCGGTGATATTCACCAAACAA
TTACTACGCTTATAAATGATAAAATACGTGTTGGAATCGTGGGCCTTGCT
GCTCAAGTGGCAATCTGTCGCGAAATTTGTGGCAAGACTAACGGGGGCGA
CGATACCACATACGGTGTAGCACTCAATGAACAACATTTCCGTGACCTTG
TGATGAATGTGACAACACCACCAGCCACATACTCTCAGAAGCAGTCCACA
AGCTCTCTCTTGATGATGGGTTTTCCATCACGAACCGTTGAGGCTTACCC
TTCACTTTGTGCATGCCATTCCAAGCCTTCTCGTGGGGGCTATCTGTGCT
CACGGTGCAACAGCAAGGTTTGTGGTCTCCCTGCCGAGTGTCCTTCCTGT
GGTCTTACTTTGA
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Coding sequence (CDS) from alignment at OGUI01000002.1:78497..79659-

>ATCC64974_7610-T1 ID=ATCC64974_7610-T1|Name=ATCC64974_7610-T1|organism=Aspergillus niger N402|type=CDS|length=3852bp|location=Sequence derived from alignment at OGUI01000002.1:78497..79659- (Aspergillus niger N402)
CAAGGTTTGTGGTCTCCCTGCCGAGTGTCCTTCCTGTGGTCTTACTTTGA
CCATACTCCAAGCCATGGCACCCGTGAGATCTTCGTCATTTTTGGCTCCC
TCCTTTCCTCTGATCCCGGTGATATTCACCAAACAATTACTACGCTTATA
AATGATAAAATACGTGTTGGAATCGTGGGCCTTGCTGCTCAAGTGGCAAT
CTGTCGCGAAATTTGTGGCAAGACTAACGGGGGCGACGATACCACATACG
GTGTAGCACTCAATGAACAACATTTCCGTGACCTTGTGATGAATGTGACA
ACACCACCAGCCACATACTCTCAGAAGCAGTCCACAAGCTCTCTCTTGAT
GATGGGTTTTCCATCACGAACCGTTGAGGCTTACCCTTCACTTTGCTCCT
CAGAGATACGACTCCTTTACAACGGGGTATAATCCGTCATCTCATCTTGA
TTATAGATCTGTCACAATCTATGACCGAGAAAGATCTCCGACCGACACGT
TACTTATTGTCCTTACGGTATGCACAAGAGTTCGTGAGGGAATTTTTCGA
GCAAAATCCCATCTCTCAACTCGGCGTTCTTGGCCTCAAAGATGGACTGG
CGGTCAGAGTCAGTGATATGAGTGGAAACCCTACTGAGCATATTAGTGCC
ATCCAATCACTGCGAGACCAGGATCCGAAAGGTCTTCCTAGTCTGCAAAA
TGGCTTCGAAATGGCTCGTGGTGCCTTGTTATGGTCGATTCCGATGAAGA
GTACATAGGAGAAATCTCTGAGGATGAGGATGAAAACAATCTTCTACCAG
GGTCTCGCGGAGAGACTACGTCCGCATCCCGCTCCAAGAGGAGAAAGCAC
CGTGGAGGCGCAGAATGGGAGGTCTCGAGAACATGGGAAACCTTAGTTGA
AGGTGCCGACGGTACAATCAGCTCTACAGTTGAAGGGCTTCTCGAGGCTG
GGAAAAGGAAAAGCAAGGTTTGTGGTCTCCCTGCCGAGTGTCCTTCCTGT
GGTCTTACTTTGACCATACTCCAAGCCATGGCACCCGTGAGATCTTCGTC
ATTTTTGGCTCCCTCCTTTCCTCTGATCCCGGTGATATTCACCAAACAAT
TACTACGCTTATAAATGATAAAATACGTGTTGGAATCGTGGGCCTTGCTG
CTCAAGTGGCAATCTGTCGCGAAATTTGTGGCAAGACTAACGGGGGCGAC
GATACCACATACGGTGTAGCACTCAATGAACAACATTTCCGTGACCTTGT
GATGAATGTGACAACACCACCAGCCACATACTCTCAGAAGCAGTCCACAA
GCTCTCTCTTGATGATGGGTTTTCCATCACGAACCGTTGAGGCTTACCCT
TCACTTTGCTCCTCAGAGATACGACTCCTTTACAACGGGGTATAATCCGT
CATCTCATCTTGATTATAGATCTGTCACAATCTATGACCGAGAAAGATCT
CCGACCGACACGTTACTTATTGTCCTTACGGTATGCACAAGAGTTCGTGA
GGGAATTTTTCGAGCAAAATCCCATCTCTCAACTCGGCGTTCTTGGCCTC
AAAGATGGACTGGCGGTCAGAGTCAGTGATATGAGTGGAAACCCTACTGA
GCATATTAGTGCCATCCAATCACTGCGAGACCAGGATCCGAAAGGTCTTC
CTAGTCTGCAAAATGGCTTCGAAATGGCTCGTGGTGCCTTGTTATGGTCG
ATTCCGATGAAGAGTACATAGGAGAAATCTCTGAGGATGAGGATGAAAAC
AATCTTCTACCAGGGTCTCGCGGAGAGACTACGTCCGCATCCCGCTCCAA
GAGGAGAAAGCACCGTGGAGGCGCAGAATGGGAGGTCTCGAGAACATGGG
AAACCTTAGTTGAAGGTGCCGACGGTACAATCAGCTCTACAGTTGAAGGG
CTTCTCGAGGCTGGGAAAAGGAAAAGCAAGGTTTGTGGTCTCCCTGCCGA
GTGTCCTTCCTGTGGTCTTACTTTGACCATACTCCAAGCCATGGCACCCG
TGAGATCTTCGTCATTTTTGGCTCCCTCCTTTCCTCTGATCCCGGTGATA
TTCACCAAACAATTACTACGCTTATAAATGATAAAATACGTGTTGGAATC
GTGGGCCTTGCTGCTCAAGTGGCAATCTGTCGCGAAATTTGTGGCAAGAC
TAACGGGGGCGACGATACCACATACGGTGTAGCACTCAATGAACAACATT
TCCGTGACCTTGTGATGAATGTGACAACACCACCAGCCACATACTCTCAG
AAGCAGTCCACAAGCTCTCTCTTGATGATGGGTTTTCCATCACGAACCGT
TGAGGCTTACCCTTCACTTTGCTCCTCAGAGATACGACTCCTTTACAACG
GGGTATAATCCGTCATCTCATCTTGATTATAGATCTGTCACAATCTATGA
CCGAGAAAGATCTCCGACCGACACGTTACTTATTGTCCTTACGGTATGCA
CAAGAGTTCGTGAGGGAATTTTTCGAGCAAAATCCCATCTCTCAACTCGG
CGTTCTTGGCCTCAAAGATGGACTGGCGGTCAGAGTCAGTGATATGAGTG
GAAACCCTACTGAGCATATTAGTGCCATCCAATCACTGCGAGACCAGGAT
CCGAAAGGTCTTCCTAGTCTGCAAAATGGCTTCGAAATGGCTCGTGGTGC
CTTGTTATGGTCGATTCCGATGAAGAGTACATAGGAGAAATCTCTGAGGA
TGAGGATGAAAACAATCTTCTACCAGGGTCTCGCGGAGAGACTACGTCCG
CATCCCGCTCCAAGAGGAGAAAGCACCGTGGAGGCGCAGAATGGGAGGTC
TCGAGAACATGGGAAACCTTAGTTGAAGGTGCCGACGGTACAATCAGCTC
TACAGTTGAAGGGCTTCTCGAGGCTGGGAAAAGGAAAAGCAAGGTTTGTG
GTCTCCCTGCCGAGTGTCCTTCCTGTGGTCTTACTTTGACCATACTCCAA
GCCATGGCACCCGTGAGATCTTCGTCATTTTTGGCTCCCTCCTTTCCTCT
GATCCCGGTGATATTCACCAAACAATTACTACGCTTATAAATGATAAAAT
ACGTGTTGGAATCGTGGGCCTTGCTGCTCAAGTGGCAATCTGTCGCGAAA
TTTGTGGCAAGACTAACGGGGGCGACGATACCACATACGGTGTAGCACTC
AATGAACAACATTTCCGTGACCTTGTGATGAATGTGACAACACCACCAGC
CACATACTCTCAGAAGCAGTCCACAAGCTCTCTCTTGATGATGGGTTTTC
CATCACGAACCGTTGAGGCTTACCCTTCACTTTGCTCCTCAGAGATACGA
CTCCTTTACAACGGGGTATAATCCGTCATCTCATCTTGATTATAGATCTG
TCACAATCTATGACCGAGAAAGATCTCCGACCGACACGTTACTTATTGTC
CTTACGGTATGCACAAGAGTTCGTGAGGGAATTTTTCGAGCAAAATCCCA
TCTCTCAACTCGGCGTTCTTGGCCTCAAAGATGGACTGGCGGTCAGAGTC
AGTGATATGAGTGGAAACCCTACTGAGCATATTAGTGCCATCCAATCACT
GCGAGACCAGGATCCGAAAGGTCTTCCTAGTCTGCAAAATGGCTTCGAAA
TGGCTCGTGGTGCCTTGTTATGGTCGATTCCGATGAAGAGTACATAGGAG
AAATCTCTGAGGATGAGGATGAAAACAATCTTCTACCAGGGTCTCGCGGA
GAGACTACGTCCGCATCCCGCTCCAAGAGGAGAAAGCACCGTGGAGGCGC
AGAATGGGAGGTCTCGAGAACATGGGAAACCTTAGTTGAAGGTGCCGACG
GTACAATCAGCTCTACAGTTGAAGGGCTTCTCGAGGCTGGGAAAAGGAAA
AG
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Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Cellular Component
TermDefinition
GO:0000439transcription factor TFIIH core complex
Vocabulary: Biological Process
TermDefinition
GO:0006351transcription, DNA-templated
GO:0006289nucleotide-excision repair
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
ATCC64974_7610ATCC64974_7610Aspergillus niger N402gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
ATCC64974_7610-T1ATCC64974_7610-T1-proteinAspergillus niger N402polypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ATCC64974_7610-T1.cdsATCC64974_7610-T1.cdsAspergillus niger N402CDS


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ATCC64974_7610-T1.exon4ATCC64974_7610-T1.exon4Aspergillus niger N402exon
ATCC64974_7610-T1.exon3ATCC64974_7610-T1.exon3Aspergillus niger N402exon
ATCC64974_7610-T1.exon2ATCC64974_7610-T1.exon2Aspergillus niger N402exon
ATCC64974_7610-T1.exon1ATCC64974_7610-T1.exon1Aspergillus niger N402exon


Properties
Property NameValue
DBxrefInterPro:IPR036465
DBxrefInterPro:IPR012170
DBxrefInterPro:IPR007198
DBxrefInterPro:IPR002035
DBxrefPFAM:PF13519
DBxrefPFAM:PF00092
DBxrefPFAM:PF04056
Producthypothetical protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger N402 whole genome analysis2021-11-01
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
OGUI01000002.1supercontigOGUI01000002.1:78497..79659 -
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