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ATCC64974_76230-T1, ATCC64974_76230-T1 (mRNA) Aspergillus niger N402

Overview
NameATCC64974_76230-T1
Unique NameATCC64974_76230-T1
TypemRNA
OrganismAspergillus niger N402
Sequences
The following sequences are available for this feature:

mRNA from alignment at OGUI01000013.1:762491..763416+

Legend: exonpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>ATCC64974_76230-T1 ID=ATCC64974_76230-T1|Name=ATCC64974_76230-T1|organism=Aspergillus niger N402|type=mRNA|length=926bp|location=Sequence derived from alignment at OGUI01000013.1:762491..763416+ (Aspergillus niger N402)
ATGGCCGAAGTCGCCCAACCGGTTCCTGCTGAGTCGCAGGCCAAGCATGT
TGTTTACTGTGGAGGTACGTCGTCTCTTCTCGTCTCTGATATCGCTTTTG
AAAGCGATGTTTTCTGAGGGAATTAAAATTTAACTGATCGTCTGATGTGA
ACAGTTTGCACATTGCCTCCGGAGGTACGCTTACATATATACATACGCCC
TATGCACTCGATCTTAAGGCCCATCTTCATCTGCGAGGACGAAGCCACTC
TGCTCCTTCCAGCAATATATTATTTAGACCCTCCAAAGAGGGCATATGGC
AGCCAGCTAACCTCGAATCCGGAATCGTCTAGTACTGTGAATTCGGTGGC
ACGGCCAAGAAATGCGAGGAATGGTTGAAGGACGCTCATCCGGACATGTA
CCAGTCGTTATATTCTGAGGGTTCGTTGTTATTTCCCTCTTCTTCTCGGA
TTTCCCGGGTGTTCAGCTCAGCTCGCTAACTTACGGTCTATTTGTCTTAT
GTAGAGGCCCTCAACTCTAATCTTGCTACATTGTCGGTATCGGCTCGGGA
GCGCGCAGCTAAGGATGCGGCGAAGAAGGAGGCTAAGGCTGCTGCGGCTG
AGGCGCGCGATGCTGAGCGGAAGGCGGCGTCTAAGGTACAGATTAAGCGG
GTTGAGCGGAACAAGCGGAAACATGTTACTGTTATCACGGGGTTGGATAT
ATATGGGTTGGAGAATAAGAAGATCGCTAAGGATCTGGGCAAGAAGTTCG
CTACTGGTTCTTCAATGACTAGGTCTGCGGGTGGAACTGAGGAAATTACC
GTGCAGGGTGATGTAAGTGATGATGTTAAGGAATGGCTGCTCGAGGTGTA
CGGGAAGGAGATCCCGGAGGCCAATATTGAGCTCATTGAGGATAAGAAGA
AGAAGAAGGCGACTGAAGCGCCCTGA
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Coding sequence (CDS) from alignment at OGUI01000013.1:762491..763416+

>ATCC64974_76230-T1 ID=ATCC64974_76230-T1|Name=ATCC64974_76230-T1|organism=Aspergillus niger N402|type=CDS|length=2376bp|location=Sequence derived from alignment at OGUI01000013.1:762491..763416+ (Aspergillus niger N402)
ATGGCCGAAGTCGCCCAACCGGTTCCTGCTGAGTCGCAGGCCAAGCATGT
TGTTTACTGTGGAGTTTGCACATTGCCTCCGGAGTACTGTGAATTCGGTG
GCACGGCCAAGAAATGCGAGGAATGGTTGAAGGACGCTCATCCGGACATG
TACCAGTCGTTATATTCTGAGGAGGCCCTCAACTCTAATCTTGCTACATT
GTCGGTATCGGCTCGGGAGCGCGCAGCTAAGGATGCGGCGAAGAAGGAGG
CTAAGGCTGCTGCGGCTGAGGCGCGCGATGCTGAGCGGAAGGCGGCGTCT
AAGGTACAGATTAAGCGGGTTGAGCGGAACAAGCGGAAACATGTTACTGT
TATCACGGGGTTGGATATATATGGGTTGGAGAATAAGAAGATCGCTAAGG
ATCTGGGCAAGAAGTTCGCTACTGGTTCTTCAATGACTAGGTCTGCGGGT
GGAACTGAGGAAATTACCGTGCAGGGTGATGTAAGTGATGATGTTAAGGA
ATGGCTGCTCGAGGTGTACGGGAAGGAGATCCCGGAGGCCAATATTGAGC
TCATTGAGGATAAGAAGAAGAAGAAGGCGACTGAAGCGCCCTGAATGGCC
GAAGTCGCCCAACCGGTTCCTGCTGAGTCGCAGGCCAAGCATGTTGTTTA
CTGTGGAGTTTGCACATTGCCTCCGGAGTACTGTGAATTCGGTGGCACGG
CCAAGAAATGCGAGGAATGGTTGAAGGACGCTCATCCGGACATGTACCAG
TCGTTATATTCTGAGGAGGCCCTCAACTCTAATCTTGCTACATTGTCGGT
ATCGGCTCGGGAGCGCGCAGCTAAGGATGCGGCGAAGAAGGAGGCTAAGG
CTGCTGCGGCTGAGGCGCGCGATGCTGAGCGGAAGGCGGCGTCTAAGGTA
CAGATTAAGCGGGTTGAGCGGAACAAGCGGAAACATGTTACTGTTATCAC
GGGGTTGGATATATATGGGTTGGAGAATAAGAAGATCGCTAAGGATCTGG
GCAAGAAGTTCGCTACTGGTTCTTCAATGACTAGGTCTGCGGGTGGAACT
GAGGAAATTACCGTGCAGGGTGATGTAAGTGATGATGTTAAGGAATGGCT
GCTCGAGGTGTACGGGAAGGAGATCCCGGAGGCCAATATTGAGCTCATTG
AGGATAAGAAGAAGAAGAAGGCGACTGAAGCGCCCTGAATGGCCGAAGTC
GCCCAACCGGTTCCTGCTGAGTCGCAGGCCAAGCATGTTGTTTACTGTGG
AGTTTGCACATTGCCTCCGGAGTACTGTGAATTCGGTGGCACGGCCAAGA
AATGCGAGGAATGGTTGAAGGACGCTCATCCGGACATGTACCAGTCGTTA
TATTCTGAGGAGGCCCTCAACTCTAATCTTGCTACATTGTCGGTATCGGC
TCGGGAGCGCGCAGCTAAGGATGCGGCGAAGAAGGAGGCTAAGGCTGCTG
CGGCTGAGGCGCGCGATGCTGAGCGGAAGGCGGCGTCTAAGGTACAGATT
AAGCGGGTTGAGCGGAACAAGCGGAAACATGTTACTGTTATCACGGGGTT
GGATATATATGGGTTGGAGAATAAGAAGATCGCTAAGGATCTGGGCAAGA
AGTTCGCTACTGGTTCTTCAATGACTAGGTCTGCGGGTGGAACTGAGGAA
ATTACCGTGCAGGGTGATGTAAGTGATGATGTTAAGGAATGGCTGCTCGA
GGTGTACGGGAAGGAGATCCCGGAGGCCAATATTGAGCTCATTGAGGATA
AGAAGAAGAAGAAGGCGACTGAAGCGCCCTGAATGGCCGAAGTCGCCCAA
CCGGTTCCTGCTGAGTCGCAGGCCAAGCATGTTGTTTACTGTGGAGTTTG
CACATTGCCTCCGGAGTACTGTGAATTCGGTGGCACGGCCAAGAAATGCG
AGGAATGGTTGAAGGACGCTCATCCGGACATGTACCAGTCGTTATATTCT
GAGGAGGCCCTCAACTCTAATCTTGCTACATTGTCGGTATCGGCTCGGGA
GCGCGCAGCTAAGGATGCGGCGAAGAAGGAGGCTAAGGCTGCTGCGGCTG
AGGCGCGCGATGCTGAGCGGAAGGCGGCGTCTAAGGTACAGATTAAGCGG
GTTGAGCGGAACAAGCGGAAACATGTTACTGTTATCACGGGGTTGGATAT
ATATGGGTTGGAGAATAAGAAGATCGCTAAGGATCTGGGCAAGAAGTTCG
CTACTGGTTCTTCAATGACTAGGTCTGCGGGTGGAACTGAGGAAATTACC
GTGCAGGGTGATGTAAGTGATGATGTTAAGGAATGGCTGCTCGAGGTGTA
CGGGAAGGAGATCCCGGAGGCCAATATTGAGCTCATTGAGGATAAGAAGA
AGAAGAAGGCGACTGAAGCGCCCTGA
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Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Molecular Function
TermDefinition
GO:0003743translation initiation factor activity
Vocabulary: Biological Process
TermDefinition
GO:0006413translational initiation
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
TMA22ATCC64974_76230Aspergillus niger N402gene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ATCC64974_76230-T1.exon1ATCC64974_76230-T1.exon1Aspergillus niger N402exon
ATCC64974_76230-T1.exon2ATCC64974_76230-T1.exon2Aspergillus niger N402exon
ATCC64974_76230-T1.exon3ATCC64974_76230-T1.exon3Aspergillus niger N402exon
ATCC64974_76230-T1.exon4ATCC64974_76230-T1.exon4Aspergillus niger N402exon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ATCC64974_76230-T1.cdsATCC64974_76230-T1.cdsAspergillus niger N402CDS


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
ATCC64974_76230-T1ATCC64974_76230-T1-proteinAspergillus niger N402polypeptide


Properties
Property NameValue
NoteEggNog:ENOG41
NoteBUSCO:EOG092652NQ
DBxrefInterPro:IPR036877
DBxrefInterPro:IPR001950
DBxrefPFAM:PF01253
ProductTranslation machinery-associated protein 22
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger N402 whole genome analysis2021-11-01
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
OGUI01000013.1supercontigOGUI01000013.1:762491..763416 +
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