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ATCC64974_76270-T1, ATCC64974_76270-T1 (mRNA) Aspergillus niger N402

Overview
NameATCC64974_76270-T1
Unique NameATCC64974_76270-T1
TypemRNA
OrganismAspergillus niger N402
Sequences
The following sequences are available for this feature:

mRNA from alignment at OGUI01000013.1:768668..769586+

Legend: polypeptideexonCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>ATCC64974_76270-T1 ID=ATCC64974_76270-T1|Name=ATCC64974_76270-T1|organism=Aspergillus niger N402|type=mRNA|length=919bp|location=Sequence derived from alignment at OGUI01000013.1:768668..769586+ (Aspergillus niger N402)
ATGGTACACGCCGCCGACCACCTGTCTGCCCAAGAGCTCGAGACGCTCTC
CACCAAGGCCATCGCCGCCAAGGACACCGCATACTGTAAGTCAGCCAGTC
CACTGGAGAAAAAGCCGCCGTATCTTCAGAATTAACCAATGCGACATCAA
TAACACCAACAGGCCCCTACTCAAAGTTCCGTGTTGGCGCATGCATTTTG
ACCGAGTCGGGCGAATTCGTCCAGGGCGCCAATGTTGAAAATGCCTCTTA
TCCTGTTGGAACTTGTGCGGAGCGAGTAGCTTTTGGAAGTGCGATTGTAA
GCTATCAACTCTACACCTCTTTTTCTTTTAATCTCTGGGTCTAGTACTTG
CTGTACCTTGCACATGTCAGAAATCAACTGAAGAAAATCACTCATGCATT
TGCTTACTCGTCGGACTGCTTTGCAGGTGGCCGGGCATCGCAACTTCAAG
GCCATTGCCGTTGCGACTGACATCAAACCTCCCGCTTCACCATGCGGCAT
GTGTAGACAGTTGTACGTATCGTTCTCTACCCCCTGGCCCTGGTTTTTCG
ATTTTTAAGCTGTACCCGCGAATAGCTTGCAAAAAAGAAGACAAGCGACC
ACTCAATCCATCCATTAATGATTGATTGGCTACCCGGAGATTTCTATAAT
TCCCTCATCCCAATAATGCGACAACAAACCACGCACGTACCTGGCTAACA
ACAATGATTTGTGTATCTCAGTATGAGTGAATTTACCACCCCAGAGTTCC
CTATCTTTATGTATGATGGTGAGGGGAACTATACTCTTACTACAATGGGA
GAGGTAATATATTGAGCCAATCCTTCCAACCATTCTGTTCTGAATCAGTG
GCTGACTGATGACTTGTTCGCATCCAGCTCCTACCGAGCTCGTTCGGCCC
GAGTGATTTCACTCATTGA
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Coding sequence (CDS) from alignment at OGUI01000013.1:768668..769586+

>ATCC64974_76270-T1 ID=ATCC64974_76270-T1|Name=ATCC64974_76270-T1|organism=Aspergillus niger N402|type=CDS|length=2145bp|location=Sequence derived from alignment at OGUI01000013.1:768668..769586+ (Aspergillus niger N402)
ATGGTACACGCCGCCGACCACCTGTCTGCCCAAGAGCTCGAGACGCTCTC
CACCAAGGCCATCGCCGCCAAGGACACCGCATACTGCCCCTACTCAAAGT
TCCGTGTTGGCGCATGCATTTTGACCGAGTCGGGCGAATTCGTCCAGGGC
GCCAATGTTGAAAATGCCTCTTATCCTGTTGGAACTTGTGCGGAGCGAGT
AGCTTTTGGAAGTGCGATTGTGGCCGGGCATCGCAACTTCAAGGCCATTG
CCGTTGCGACTGACATCAAACCTCCCGCTTCACCATGCGGCATGTGTAGA
CAGTTTATGAGTGAATTTACCACCCCAGAGTTCCCTATCTTTATGTATGA
TGGTGAGGGGAACTATACTCTTACTACAATGGGAGAGCTCCTACCGAGCT
CGTTCGGCCCGAGTGATTTCACTCATTGAATGGTACACGCCGCCGACCAC
CTGTCTGCCCAAGAGCTCGAGACGCTCTCCACCAAGGCCATCGCCGCCAA
GGACACCGCATACTGCCCCTACTCAAAGTTCCGTGTTGGCGCATGCATTT
TGACCGAGTCGGGCGAATTCGTCCAGGGCGCCAATGTTGAAAATGCCTCT
TATCCTGTTGGAACTTGTGCGGAGCGAGTAGCTTTTGGAAGTGCGATTGT
GGCCGGGCATCGCAACTTCAAGGCCATTGCCGTTGCGACTGACATCAAAC
CTCCCGCTTCACCATGCGGCATGTGTAGACAGTTTATGAGTGAATTTACC
ACCCCAGAGTTCCCTATCTTTATGTATGATGGTGAGGGGAACTATACTCT
TACTACAATGGGAGAGCTCCTACCGAGCTCGTTCGGCCCGAGTGATTTCA
CTCATTGAATGGTACACGCCGCCGACCACCTGTCTGCCCAAGAGCTCGAG
ACGCTCTCCACCAAGGCCATCGCCGCCAAGGACACCGCATACTGCCCCTA
CTCAAAGTTCCGTGTTGGCGCATGCATTTTGACCGAGTCGGGCGAATTCG
TCCAGGGCGCCAATGTTGAAAATGCCTCTTATCCTGTTGGAACTTGTGCG
GAGCGAGTAGCTTTTGGAAGTGCGATTGTGGCCGGGCATCGCAACTTCAA
GGCCATTGCCGTTGCGACTGACATCAAACCTCCCGCTTCACCATGCGGCA
TGTGTAGACAGTTTATGAGTGAATTTACCACCCCAGAGTTCCCTATCTTT
ATGTATGATGGTGAGGGGAACTATACTCTTACTACAATGGGAGAGCTCCT
ACCGAGCTCGTTCGGCCCGAGTGATTTCACTCATTGAATGGTACACGCCG
CCGACCACCTGTCTGCCCAAGAGCTCGAGACGCTCTCCACCAAGGCCATC
GCCGCCAAGGACACCGCATACTGCCCCTACTCAAAGTTCCGTGTTGGCGC
ATGCATTTTGACCGAGTCGGGCGAATTCGTCCAGGGCGCCAATGTTGAAA
ATGCCTCTTATCCTGTTGGAACTTGTGCGGAGCGAGTAGCTTTTGGAAGT
GCGATTGTGGCCGGGCATCGCAACTTCAAGGCCATTGCCGTTGCGACTGA
CATCAAACCTCCCGCTTCACCATGCGGCATGTGTAGACAGTTTATGAGTG
AATTTACCACCCCAGAGTTCCCTATCTTTATGTATGATGGTGAGGGGAAC
TATACTCTTACTACAATGGGAGAGCTCCTACCGAGCTCGTTCGGCCCGAG
TGATTTCACTCATTGAATGGTACACGCCGCCGACCACCTGTCTGCCCAAG
AGCTCGAGACGCTCTCCACCAAGGCCATCGCCGCCAAGGACACCGCATAC
TGCCCCTACTCAAAGTTCCGTGTTGGCGCATGCATTTTGACCGAGTCGGG
CGAATTCGTCCAGGGCGCCAATGTTGAAAATGCCTCTTATCCTGTTGGAA
CTTGTGCGGAGCGAGTAGCTTTTGGAAGTGCGATTGTGGCCGGGCATCGC
AACTTCAAGGCCATTGCCGTTGCGACTGACATCAAACCTCCCGCTTCACC
ATGCGGCATGTGTAGACAGTTTATGAGTGAATTTACCACCCCAGAGTTCC
CTATCTTTATGTATGATGGTGAGGGGAACTATACTCTTACTACAATGGGA
GAGCTCCTACCGAGCTCGTTCGGCCCGAGTGATTTCACTCATTGA
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Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Biological Process
TermDefinition
GO:0009972cytidine deamination
Vocabulary: Molecular Function
TermDefinition
GO:0003824catalytic activity
GO:0004126cytidine deaminase activity
GO:0008270zinc ion binding
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
ATCC64974_76270ATCC64974_76270Aspergillus niger N402gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
ATCC64974_76270-T1ATCC64974_76270-T1-proteinAspergillus niger N402polypeptide


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ATCC64974_76270-T1.exon1ATCC64974_76270-T1.exon1Aspergillus niger N402exon
ATCC64974_76270-T1.exon2ATCC64974_76270-T1.exon2Aspergillus niger N402exon
ATCC64974_76270-T1.exon3ATCC64974_76270-T1.exon3Aspergillus niger N402exon
ATCC64974_76270-T1.exon4ATCC64974_76270-T1.exon4Aspergillus niger N402exon
ATCC64974_76270-T1.exon5ATCC64974_76270-T1.exon5Aspergillus niger N402exon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ATCC64974_76270-T1.cdsATCC64974_76270-T1.cdsAspergillus niger N402CDS


Properties
Property NameValue
NoteBUSCO:EOG09264RJL
DBxrefInterPro:IPR016193
DBxrefInterPro:IPR006262
DBxrefInterPro:IPR002125
DBxrefPFAM:PF08211
DBxrefPFAM:PF00383
Producthypothetical protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger N402 whole genome analysis2021-11-01
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
OGUI01000013.1supercontigOGUI01000013.1:768668..769586 +
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