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Sequences
The following sequences are available for this feature:
mRNA from alignment at OGUI01000002.1:84619..85675+ Legend: polypeptideexonCDS Hold the cursor over a type above to highlight its positions in the sequence below. >ATCC64974_7630-T1 ID=ATCC64974_7630-T1|Name=ATCC64974_7630-T1|organism=Aspergillus niger N402|type=mRNA|length=1057bp|location=Sequence derived from alignment at OGUI01000002.1:84619..85675+ (Aspergillus niger N402)
ATGAACCCCGAGTGGTAAGTGCCCTTGATCGTCTGTATTTGGCCTACAGC
TCATCAGGTTCTGGCGATTCTCCCCCCTTGCCATGATGGCACTACGTCTT
TTCATCCACAAATTTCTTGTTTCTTGTTTTTCGTGCTAATTTGAATCGCT
ATTAGAGCCTCCACGATCCTCCGTCTCTCCCATGCTTTACTTGGCCGGCG
CGGCCCTCTGTGTGCGTATCGATCCATATGCTAATGATTTGGCTAGATAC
GATTATCTTTTCAAGTTGCTCCTCATCGGAGACTCTGGTGTCGGAAAGTC
GTGCTTGCTCCTACGTTTTGCCGACGATACCTATACGGAGAGCTACATCT
CCACCATCGGAGTTGACTTCGTACGTATCTGGCCTCTCATTATTCATCAC
AGCTGCTAGCAGTGAACTGCGTCATAGATCCACATCTAACGTTCCAATAC
AGAAAATTCGTACCATCGAGCTGGATGGAAAGACGGTGAAACTCCAGATC
GTAAGGCAGCCCCGTTCACAACAGTCGCTCACCTGGCTTAACTAACGGGC
GCTCTAGTGGGATACTGCAGGCCAGGAACGTTTCCGGACAATCACGTCGT
CTTACTACCGTGGTGCCCATGGCATCTGTGTCGTCTACGATGTTACCGAC
ATGGACTCTTTCAACAATGTGAAGCAGTGGCTTCAAGAGATTGATCGCTA
CGCCACTGAAGGTGTCAATAAGCTCCTTGTCGGAAACAAGAGCGATATGG
AAGACAAAAAGGTCGTGGAATACACAGTGGCTAAGGTATGTGGCCAGACC
TTGGTGTGGGACTCTTCATTTCTGGCAGAGTGGGTGATTGACGCAATGTG
TTGTTGGTTTAGGAATTCGCCGACAGCCTTGGGATCCCGTTCTTGGAAAC
CTCGGCGAAGAACGCTTCGAATGTCGAGCAGGCTTTTTTGACAATGGCGA
GGCAGATCAAGGAACGCATGGGCACTGCGACTGTCAACAACAAGCCAACT
GTGCAGGTTGGCCAAGGCCAGGGCGTTCAATCCGGCTCCGCGGGCGGCTG
CTGCTAG back to topCoding sequence (CDS) from alignment at OGUI01000002.1:84619..85675+ >ATCC64974_7630-T1 ID=ATCC64974_7630-T1|Name=ATCC64974_7630-T1|organism=Aspergillus niger N402|type=CDS|length=3030bp|location=Sequence derived from alignment at OGUI01000002.1:84619..85675+ (Aspergillus niger N402)
ATGAACCCCGAATACGATTATCTTTTCAAGTTGCTCCTCATCGGAGACTC
TGGTGTCGGAAAGTCGTGCTTGCTCCTACGTTTTGCCGACGATACCTATA
CGGAGAGCTACATCTCCACCATCGGAGTTGACTTCAAAATTCGTACCATC
GAGCTGGATGGAAAGACGGTGAAACTCCAGATCTGGGATACTGCAGGCCA
GGAACGTTTCCGGACAATCACGTCGTCTTACTACCGTGGTGCCCATGGCA
TCTGTGTCGTCTACGATGTTACCGACATGGACTCTTTCAACAATGTGAAG
CAGTGGCTTCAAGAGATTGATCGCTACGCCACTGAAGGTGTCAATAAGCT
CCTTGTCGGAAACAAGAGCGATATGGAAGACAAAAAGGTCGTGGAATACA
CAGTGGCTAAGGAATTCGCCGACAGCCTTGGGATCCCGTTCTTGGAAACC
TCGGCGAAGAACGCTTCGAATGTCGAGCAGGCTTTTTTGACAATGGCGAG
GCAGATCAAGGAACGCATGGGCACTGCGACTGTCAACAACAAGCCAACTG
TGCAGGTTGGCCAAGGCCAGGGCGTTCAATCCGGCTCCGCGGGCGGCTGC
TGCTAGATGAACCCCGAATACGATTATCTTTTCAAGTTGCTCCTCATCGG
AGACTCTGGTGTCGGAAAGTCGTGCTTGCTCCTACGTTTTGCCGACGATA
CCTATACGGAGAGCTACATCTCCACCATCGGAGTTGACTTCAAAATTCGT
ACCATCGAGCTGGATGGAAAGACGGTGAAACTCCAGATCTGGGATACTGC
AGGCCAGGAACGTTTCCGGACAATCACGTCGTCTTACTACCGTGGTGCCC
ATGGCATCTGTGTCGTCTACGATGTTACCGACATGGACTCTTTCAACAAT
GTGAAGCAGTGGCTTCAAGAGATTGATCGCTACGCCACTGAAGGTGTCAA
TAAGCTCCTTGTCGGAAACAAGAGCGATATGGAAGACAAAAAGGTCGTGG
AATACACAGTGGCTAAGGAATTCGCCGACAGCCTTGGGATCCCGTTCTTG
GAAACCTCGGCGAAGAACGCTTCGAATGTCGAGCAGGCTTTTTTGACAAT
GGCGAGGCAGATCAAGGAACGCATGGGCACTGCGACTGTCAACAACAAGC
CAACTGTGCAGGTTGGCCAAGGCCAGGGCGTTCAATCCGGCTCCGCGGGC
GGCTGCTGCTAGATGAACCCCGAATACGATTATCTTTTCAAGTTGCTCCT
CATCGGAGACTCTGGTGTCGGAAAGTCGTGCTTGCTCCTACGTTTTGCCG
ACGATACCTATACGGAGAGCTACATCTCCACCATCGGAGTTGACTTCAAA
ATTCGTACCATCGAGCTGGATGGAAAGACGGTGAAACTCCAGATCTGGGA
TACTGCAGGCCAGGAACGTTTCCGGACAATCACGTCGTCTTACTACCGTG
GTGCCCATGGCATCTGTGTCGTCTACGATGTTACCGACATGGACTCTTTC
AACAATGTGAAGCAGTGGCTTCAAGAGATTGATCGCTACGCCACTGAAGG
TGTCAATAAGCTCCTTGTCGGAAACAAGAGCGATATGGAAGACAAAAAGG
TCGTGGAATACACAGTGGCTAAGGAATTCGCCGACAGCCTTGGGATCCCG
TTCTTGGAAACCTCGGCGAAGAACGCTTCGAATGTCGAGCAGGCTTTTTT
GACAATGGCGAGGCAGATCAAGGAACGCATGGGCACTGCGACTGTCAACA
ACAAGCCAACTGTGCAGGTTGGCCAAGGCCAGGGCGTTCAATCCGGCTCC
GCGGGCGGCTGCTGCTAGATGAACCCCGAATACGATTATCTTTTCAAGTT
GCTCCTCATCGGAGACTCTGGTGTCGGAAAGTCGTGCTTGCTCCTACGTT
TTGCCGACGATACCTATACGGAGAGCTACATCTCCACCATCGGAGTTGAC
TTCAAAATTCGTACCATCGAGCTGGATGGAAAGACGGTGAAACTCCAGAT
CTGGGATACTGCAGGCCAGGAACGTTTCCGGACAATCACGTCGTCTTACT
ACCGTGGTGCCCATGGCATCTGTGTCGTCTACGATGTTACCGACATGGAC
TCTTTCAACAATGTGAAGCAGTGGCTTCAAGAGATTGATCGCTACGCCAC
TGAAGGTGTCAATAAGCTCCTTGTCGGAAACAAGAGCGATATGGAAGACA
AAAAGGTCGTGGAATACACAGTGGCTAAGGAATTCGCCGACAGCCTTGGG
ATCCCGTTCTTGGAAACCTCGGCGAAGAACGCTTCGAATGTCGAGCAGGC
TTTTTTGACAATGGCGAGGCAGATCAAGGAACGCATGGGCACTGCGACTG
TCAACAACAAGCCAACTGTGCAGGTTGGCCAAGGCCAGGGCGTTCAATCC
GGCTCCGCGGGCGGCTGCTGCTAGATGAACCCCGAATACGATTATCTTTT
CAAGTTGCTCCTCATCGGAGACTCTGGTGTCGGAAAGTCGTGCTTGCTCC
TACGTTTTGCCGACGATACCTATACGGAGAGCTACATCTCCACCATCGGA
GTTGACTTCAAAATTCGTACCATCGAGCTGGATGGAAAGACGGTGAAACT
CCAGATCTGGGATACTGCAGGCCAGGAACGTTTCCGGACAATCACGTCGT
CTTACTACCGTGGTGCCCATGGCATCTGTGTCGTCTACGATGTTACCGAC
ATGGACTCTTTCAACAATGTGAAGCAGTGGCTTCAAGAGATTGATCGCTA
CGCCACTGAAGGTGTCAATAAGCTCCTTGTCGGAAACAAGAGCGATATGG
AAGACAAAAAGGTCGTGGAATACACAGTGGCTAAGGAATTCGCCGACAGC
CTTGGGATCCCGTTCTTGGAAACCTCGGCGAAGAACGCTTCGAATGTCGA
GCAGGCTTTTTTGACAATGGCGAGGCAGATCAAGGAACGCATGGGCACTG
CGACTGTCAACAACAAGCCAACTGTGCAGGTTGGCCAAGGCCAGGGCGTT
CAATCCGGCTCCGCGGGCGGCTGCTGCTAG back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Molecular Function
| Term | Definition |
|---|
| GO:0003924 | GTPase activity |
| GO:0005525 | GTP binding |
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| ATCC64974_7630-T1 | ATCC64974_7630-T1-protein | Aspergillus niger N402 | polypeptide |
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Properties
| Property Name | Value |
|---|
| DBxref | InterPro:IPR027417 |
| DBxref | InterPro:IPR001806 |
| DBxref | InterPro:IPR005225 |
| DBxref | PFAM:PF08477 |
| DBxref | PFAM:PF00071 |
| DBxref | PFAM:PF01926 |
| DBxref | PFAM:PF00025 |
| Product | GTP-binding protein of the rab |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| OGUI01000002.1 | supercontig | OGUI01000002.1:84619..85675 + |
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