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ATCC64974_76430-T1, ATCC64974_76430-T1 (mRNA) Aspergillus niger N402

Overview
NameATCC64974_76430-T1
Unique NameATCC64974_76430-T1
TypemRNA
OrganismAspergillus niger N402
Sequences
The following sequences are available for this feature:

mRNA from alignment at OGUI01000013.1:918750..920867+

Legend: exonpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>ATCC64974_76430-T1 ID=ATCC64974_76430-T1|Name=ATCC64974_76430-T1|organism=Aspergillus niger N402|type=mRNA|length=2118bp|location=Sequence derived from alignment at OGUI01000013.1:918750..920867+ (Aspergillus niger N402)
ATGAAGAACCTCGTTCCCGATCACTCTGAAGCTCTTTCTGAAGTCCAAAC
CCATGAACCGATTACTTCGTTCAAATCAGGGTTGACGACTCCCTGGATTT
TCCTCCAACCCACGACTGAGTTGAAAACTACTATCACTGGCTCTGTGAAG
TACTATTTAGATTCGTTGGCTTCGTCGGTCGGCGATTCCCAATGTGCACG
CCAACGCAGGAATAGAAAGCGCAAAAGGTCCGAAGTTGAGGAAAGTTCTA
CAAGCCAGGCCCTGCAGCTCAAGCAACTTTATGTCGATGGCTTTACTTCT
GACCAGATATGGCAACAAGCCCTGAGAATCCTTGATTCTTCAGGTGGTGA
GGTTGAGCGGGATTTTACTTGGTGGTCTGCAGTGTCCAAACCATACGACC
CGCCCCTGACCTCAACTTATGATTTGGCTCTTGATGACGCCGAATTAGAG
GGCAGCAACCTCGACTCTCAGTCAGAGACCGATCTTACCCGATCGAGTAT
CGATGATGACGACCTTAGTTCAGTACACGATCACTCTGAAACCTCCCCCC
ACGATGATTCAGACGTCGAAGAAGACATTGAAAAATTATCCGACAATATT
CCCGGAAACGACATCGACGAAGGTGAACAAGAAACGTATGTGGAGGATCC
CTTCGGCTTGAATGATGGTTTCTTCTCGATAGATGATTTCAACAAGCAAT
CGGAACTACTCGAAAGACAAGACGTTAGTGGTGGTCCAGACAATGATTTT
GAGAGCGAGGATGATGAAATCGATTGGCACGCAAATCCTCTTAGTACGAC
AGGGTCAATGTCTTTATCGAAGGGAGACATGCCACAGGAGAACTCTGACG
GGAATGGTGACGAGAATATGTCTGACAGTGAAGAGGAGGGACCAACATTT
GGGGATGCAGGCCTTGAGGACGATTCCGATATGGACGAAGATAATGTCTA
TGCCACAAACTCCGGAGGCGAAGGTTGGATAAACACTAGCGACATAAAGT
ATTCTGACTTCTTCGCGCCTCCTCCGCGTAAAGTTACTCGCAAAAAGTCT
CGCTCCCTTCCCAAAACTCAGCCTGATATTGCTATTACCAACGACGACGT
TGATCGTGCCATGGCTGATGTTCGCCGTGATCTCTTTGAAGACGAACCTT
CCGGTGAAGACAGTGATGAACATGAAGTAGCGCGAGGATCTCAGATCAAT
TATTCTAGTCATGAGAAGCAGCGTGCTCGCATTGCTGATGAGATTCGCCG
TTTGGAGGCTGCAAACGTTGCCAAGAAGGATTGGATGCTAGCTGGTGAAG
CCAGGGCTGTCGAAAGGCCTGTGAACTCGCTTATTGAAGAAGACCTGGAT
TTCGAAAGAATCGGAAAGCCCGTGCCAGTCGTCACAGCAGAGATGTCAGA
GGATATTGAAGAGCTTATCAAGCGTCGGATTCTCGCCAAACAATTTGACG
AAGTAATACGACGTCGCCCTGGTGTTTCCGACGCACTGAGCGCACGGGGA
AGCCGTCCTGAATTGGAAGATACCAAACCCCAGCAGAGTCTTGCTGAATT
ATATGAGGCCGACCATCTTCGTGCTACTGATCCAAACTTCGTTGACCCTA
AAAATCAGAAGTTGATCCGCGAGCATGCTACTGTGACAAGTTTATGGAAA
GAGATCAGCTCTCAATTAGACACGCTCTCAAACTGGCATTACAAGCCCAA
GGCTCCGCAGGCAAGCATCAATGTTGTCACCGATGTGGCAACAATTACTA
TGGAGGATGCTCAGCCGACAGCCAGCAACGCTGTCAATGGGACGGCAACC
CTTGCGCCGCAGGAGATCTACGCACCTGGCGACGATAACAAAGTCGCTGG
TGAAATGATTTTGAAGAATGGAACGGCAATCGCCAAAGAGGAAATGACCC
GGGAACAAAAGGCTAAGTTGAGGCGAGAGCACAAGAAGCAAATCGCTAGC
ACCGCAAAATCTCAGAAGACAGGGAAAGCGGCTGAGAAACAGCAGCTCAT
GTCGGACTTGAAGAAGGGTGGAGTCAAATTGATTGGAAAGCAGGGCGAAG
TGACGAATATCAATGGCGGTAAAATCAAAGAAGGTGTGAAGGAAGGTGGC
CATGTGCTCAAGCTTTAG
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Coding sequence (CDS) from alignment at OGUI01000013.1:918750..920867+

>ATCC64974_76430-T1 ID=ATCC64974_76430-T1|Name=ATCC64974_76430-T1|organism=Aspergillus niger N402|type=CDS|length=2118bp|location=Sequence derived from alignment at OGUI01000013.1:918750..920867+ (Aspergillus niger N402)
ATGAAGAACCTCGTTCCCGATCACTCTGAAGCTCTTTCTGAAGTCCAAAC
CCATGAACCGATTACTTCGTTCAAATCAGGGTTGACGACTCCCTGGATTT
TCCTCCAACCCACGACTGAGTTGAAAACTACTATCACTGGCTCTGTGAAG
TACTATTTAGATTCGTTGGCTTCGTCGGTCGGCGATTCCCAATGTGCACG
CCAACGCAGGAATAGAAAGCGCAAAAGGTCCGAAGTTGAGGAAAGTTCTA
CAAGCCAGGCCCTGCAGCTCAAGCAACTTTATGTCGATGGCTTTACTTCT
GACCAGATATGGCAACAAGCCCTGAGAATCCTTGATTCTTCAGGTGGTGA
GGTTGAGCGGGATTTTACTTGGTGGTCTGCAGTGTCCAAACCATACGACC
CGCCCCTGACCTCAACTTATGATTTGGCTCTTGATGACGCCGAATTAGAG
GGCAGCAACCTCGACTCTCAGTCAGAGACCGATCTTACCCGATCGAGTAT
CGATGATGACGACCTTAGTTCAGTACACGATCACTCTGAAACCTCCCCCC
ACGATGATTCAGACGTCGAAGAAGACATTGAAAAATTATCCGACAATATT
CCCGGAAACGACATCGACGAAGGTGAACAAGAAACGTATGTGGAGGATCC
CTTCGGCTTGAATGATGGTTTCTTCTCGATAGATGATTTCAACAAGCAAT
CGGAACTACTCGAAAGACAAGACGTTAGTGGTGGTCCAGACAATGATTTT
GAGAGCGAGGATGATGAAATCGATTGGCACGCAAATCCTCTTAGTACGAC
AGGGTCAATGTCTTTATCGAAGGGAGACATGCCACAGGAGAACTCTGACG
GGAATGGTGACGAGAATATGTCTGACAGTGAAGAGGAGGGACCAACATTT
GGGGATGCAGGCCTTGAGGACGATTCCGATATGGACGAAGATAATGTCTA
TGCCACAAACTCCGGAGGCGAAGGTTGGATAAACACTAGCGACATAAAGT
ATTCTGACTTCTTCGCGCCTCCTCCGCGTAAAGTTACTCGCAAAAAGTCT
CGCTCCCTTCCCAAAACTCAGCCTGATATTGCTATTACCAACGACGACGT
TGATCGTGCCATGGCTGATGTTCGCCGTGATCTCTTTGAAGACGAACCTT
CCGGTGAAGACAGTGATGAACATGAAGTAGCGCGAGGATCTCAGATCAAT
TATTCTAGTCATGAGAAGCAGCGTGCTCGCATTGCTGATGAGATTCGCCG
TTTGGAGGCTGCAAACGTTGCCAAGAAGGATTGGATGCTAGCTGGTGAAG
CCAGGGCTGTCGAAAGGCCTGTGAACTCGCTTATTGAAGAAGACCTGGAT
TTCGAAAGAATCGGAAAGCCCGTGCCAGTCGTCACAGCAGAGATGTCAGA
GGATATTGAAGAGCTTATCAAGCGTCGGATTCTCGCCAAACAATTTGACG
AAGTAATACGACGTCGCCCTGGTGTTTCCGACGCACTGAGCGCACGGGGA
AGCCGTCCTGAATTGGAAGATACCAAACCCCAGCAGAGTCTTGCTGAATT
ATATGAGGCCGACCATCTTCGTGCTACTGATCCAAACTTCGTTGACCCTA
AAAATCAGAAGTTGATCCGCGAGCATGCTACTGTGACAAGTTTATGGAAA
GAGATCAGCTCTCAATTAGACACGCTCTCAAACTGGCATTACAAGCCCAA
GGCTCCGCAGGCAAGCATCAATGTTGTCACCGATGTGGCAACAATTACTA
TGGAGGATGCTCAGCCGACAGCCAGCAACGCTGTCAATGGGACGGCAACC
CTTGCGCCGCAGGAGATCTACGCACCTGGCGACGATAACAAAGTCGCTGG
TGAAATGATTTTGAAGAATGGAACGGCAATCGCCAAAGAGGAAATGACCC
GGGAACAAAAGGCTAAGTTGAGGCGAGAGCACAAGAAGCAAATCGCTAGC
ACCGCAAAATCTCAGAAGACAGGGAAAGCGGCTGAGAAACAGCAGCTCAT
GTCGGACTTGAAGAAGGGTGGAGTCAAATTGATTGGAAAGCAGGGCGAAG
TGACGAATATCAATGGCGGTAAAATCAAAGAAGGTGTGAAGGAAGGTGGC
CATGTGCTCAAGCTTTAG
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Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Cellular Component
TermDefinition
GO:0034457Mpp10 complex
GO:0005634nucleus
GO:0005732small nucleolar ribonucleoprotein complex
Vocabulary: Biological Process
TermDefinition
GO:0006364rRNA processing
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
ATCC64974_76430ATCC64974_76430Aspergillus niger N402gene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ATCC64974_76430-T1.exon1ATCC64974_76430-T1.exon1Aspergillus niger N402exon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ATCC64974_76430-T1.cdsATCC64974_76430-T1.cdsAspergillus niger N402CDS


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
ATCC64974_76430-T1ATCC64974_76430-T1-proteinAspergillus niger N402polypeptide


Properties
Property NameValue
NoteBUSCO:EOG09263ROQ
DBxrefInterPro:IPR012173
DBxrefPFAM:PF04006
Producthypothetical protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger N402 whole genome analysis2021-11-01
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
OGUI01000013.1supercontigOGUI01000013.1:918750..920867 +
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