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ATCC64974_76630-T1, ATCC64974_76630-T1 (mRNA) Aspergillus niger N402

Overview
NameATCC64974_76630-T1
Unique NameATCC64974_76630-T1
TypemRNA
OrganismAspergillus niger N402
Sequences
The following sequences are available for this feature:

mRNA from alignment at OGUI01000013.1:973657..974953-

Legend: polypeptideCDSexon
Hold the cursor over a type above to highlight its positions in the sequence below.
>ATCC64974_76630-T1 ID=ATCC64974_76630-T1|Name=ATCC64974_76630-T1|organism=Aspergillus niger N402|type=mRNA|length=1297bp|location=Sequence derived from alignment at OGUI01000013.1:973657..974953- (Aspergillus niger N402)
ATGGTATGTCCCCAACTCACCCCAATGGTCCCAGGCGATTTGCCCATGAC
TATTGCTAACGTCCAGGGAACTAGGCTGCTCAAGTAATCTCCAATTCCGG
ACACGATGAGATGATTGTACGTGAACCGAGACAGAATCCTCCTACGCCAT
CGTGACAATGGCTTCATCCCTTTCTGCCTGGCCCCTGAGACTGACCGCAG
CGCATAGCACGATGCCGGCCTGGACTACTACGGCCGCAGATTGGCAACAT
GTTCATCGGACAAAACGATAAAGATCTTTGAAATCGAAGGAGAGACACAT
CGGTTGATTGAGACATTGAAGGGGTGAGGATCCTGATGCCTGGTCATCTT
ACGCGCCATCGTTTCTAACCTCCGTCCGTGTGTGAGCAGACATGAAGGAG
CTGTGTGGTGTGTGGCTTGGGTACGTCATAATGGCTTTCATTGTCAAGCT
GTCCTATTCAACTATGTATCTGACTCTGGTCTTCTCTAGGCGCACCCTAA
GTTCGGAACTATCCTCGCTTCCTCCTCGTACGATGGAAAGGTGCTCATCT
GGCGCGAACAACACCAGAACGCCACGTCACCCGTCGCTGGCGGCGCTTGG
ACGAAGGTGTTCGACTTCTCTCTACACACCGCTTCAGTGAACATGGTCTC
CTGGGCTCCGCATGAAAGTGGCTGTCTCCTCGCTTGCGCCTCCTCGGACG
GACATGTTAGCGTTCTTGAGTTCCGTGACAATAGCTGGACTCACCAGATC
TTCCACGCCCACGGTATGGGCGTGAACTCTATCAGCTGGGCACCTGCAGC
CGCCCCGGGCAGCTTGATCAGCTCCAACCCTGGACCGGGCCAGCAGCGGA
GATTCGTCACTGGTGGAAGCGACAACCTGCTGAAGATCTGGGACTACAAG
TATGCACCATGAACCGCTTCCCACTGATACTCTGCTTTCAATTGAACTAA
GCTGACCCTTACACCTCTACAGCCCGGAAACCAAGACCTACAACAACACG
CAGACTCTCGAAGGCCACTCCGACTGGGTTCGGGATGTCGCTTGGTCGCC
TAGCGTTCTTTCCAAGTCCTACATCGCCTCTGCCTCTCAAGACAAGACAG
TCCGGATCTGGACTTCCGATGCGTCAAACCCTGGTCAGTGGACCAGCCAG
CAACTTGAGTTCGACACTGTACTCTGGCGAGTTAGCTGGAGCCCTAGTGG
AAACATTCTTGCTGTGAGCGGTGGCGATAACAAGGTCAGCTTGTGGAAGG
AAAACCTCAAGGGGCAATGGGAGAAGGTAAAGGATATCGAGGAGTAG
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Coding sequence (CDS) from alignment at OGUI01000013.1:973657..974953-

>ATCC64974_76630-T1 ID=ATCC64974_76630-T1|Name=ATCC64974_76630-T1|organism=Aspergillus niger N402|type=CDS|length=5562bp|location=Sequence derived from alignment at OGUI01000013.1:973657..974953- (Aspergillus niger N402)
CCCGGAAACCAAGACCTACAACAACACGCAGACTCTCGAAGGCCACTCCG
ACTGGGTTCGGGATGTCGCTTGGTCGCCTAGCGTTCTTTCCAAGTCCTAC
ATCGCCTCTGCCTCTCAAGACAAGACAGTCCGGATCTGGACTTCCGATGC
GTCAAACCCTGGTCAGTGGACCAGCCAGCAACTTGAGTTCGACACTGTAC
TCTGGCGAGTTAGCTGGAGCCCTAGTGGAAACATTCTTGCTGTGAGCGGT
GGCGATAACAAGGTCAGCTTGTGGAAGGAAAACCTCAAGGGGCAATGGGA
GAAGGTAAAGGATATCGAGGAGTAGGCGCACCCTAAGTTCGGAACTATCC
TCGCTTCCTCCTCGTACGATGGAAAGGTGCTCATCTGGCGCGAACAACAC
CAGAACGCCACGTCACCCGTCGCTGGCGGCGCTTGGACGAAGGTGTTCGA
CTTCTCTCTACACACCGCTTCAGTGAACATGGTCTCCTGGGCTCCGCATG
AAAGTGGCTGTCTCCTCGCTTGCGCCTCCTCGGACGGACATGTTAGCGTT
CTTGAGTTCCGTGACAATAGCTGGACTCACCAGATCTTCCACGCCCACGG
TATGGGCGTGAACTCTATCAGCTGGGCACCTGCAGCCGCCCCGGGCAGCT
TGATCAGCTCCAACCCTGGACCGGGCCAGCAGCGGAGATTCGTCACTGGT
GGAAGCGACAACCTGCTGAAGATCTGGGACTACAAACATGAAGGAGCTGT
GTGGTGTGTGGCTTGGCACGATGCCGGCCTGGACTACTACGGCCGCAGAT
TGGCAACATGTTCATCGGACAAAACGATAAAGATCTTTGAAATCGAAGGA
GAGACACATCGGTTGATTGAGACATTGAAGGGGCTGCTCAAGTAATCTCC
AATTCCGGACACGATGAGATGATTATGCCCGGAAACCAAGACCTACAACA
ACACGCAGACTCTCGAAGGCCACTCCGACTGGGTTCGGGATGTCGCTTGG
TCGCCTAGCGTTCTTTCCAAGTCCTACATCGCCTCTGCCTCTCAAGACAA
GACAGTCCGGATCTGGACTTCCGATGCGTCAAACCCTGGTCAGTGGACCA
GCCAGCAACTTGAGTTCGACACTGTACTCTGGCGAGTTAGCTGGAGCCCT
AGTGGAAACATTCTTGCTGTGAGCGGTGGCGATAACAAGGTCAGCTTGTG
GAAGGAAAACCTCAAGGGGCAATGGGAGAAGGTAAAGGATATCGAGGAGT
AGGCGCACCCTAAGTTCGGAACTATCCTCGCTTCCTCCTCGTACGATGGA
AAGGTGCTCATCTGGCGCGAACAACACCAGAACGCCACGTCACCCGTCGC
TGGCGGCGCTTGGACGAAGGTGTTCGACTTCTCTCTACACACCGCTTCAG
TGAACATGGTCTCCTGGGCTCCGCATGAAAGTGGCTGTCTCCTCGCTTGC
GCCTCCTCGGACGGACATGTTAGCGTTCTTGAGTTCCGTGACAATAGCTG
GACTCACCAGATCTTCCACGCCCACGGTATGGGCGTGAACTCTATCAGCT
GGGCACCTGCAGCCGCCCCGGGCAGCTTGATCAGCTCCAACCCTGGACCG
GGCCAGCAGCGGAGATTCGTCACTGGTGGAAGCGACAACCTGCTGAAGAT
CTGGGACTACAAACATGAAGGAGCTGTGTGGTGTGTGGCTTGGCACGATG
CCGGCCTGGACTACTACGGCCGCAGATTGGCAACATGTTCATCGGACAAA
ACGATAAAGATCTTTGAAATCGAAGGAGAGACACATCGGTTGATTGAGAC
ATTGAAGGGGCTGCTCAAGTAATCTCCAATTCCGGACACGATGAGATGAT
TATGCCCGGAAACCAAGACCTACAACAACACGCAGACTCTCGAAGGCCAC
TCCGACTGGGTTCGGGATGTCGCTTGGTCGCCTAGCGTTCTTTCCAAGTC
CTACATCGCCTCTGCCTCTCAAGACAAGACAGTCCGGATCTGGACTTCCG
ATGCGTCAAACCCTGGTCAGTGGACCAGCCAGCAACTTGAGTTCGACACT
GTACTCTGGCGAGTTAGCTGGAGCCCTAGTGGAAACATTCTTGCTGTGAG
CGGTGGCGATAACAAGGTCAGCTTGTGGAAGGAAAACCTCAAGGGGCAAT
GGGAGAAGGTAAAGGATATCGAGGAGTAGGCGCACCCTAAGTTCGGAACT
ATCCTCGCTTCCTCCTCGTACGATGGAAAGGTGCTCATCTGGCGCGAACA
ACACCAGAACGCCACGTCACCCGTCGCTGGCGGCGCTTGGACGAAGGTGT
TCGACTTCTCTCTACACACCGCTTCAGTGAACATGGTCTCCTGGGCTCCG
CATGAAAGTGGCTGTCTCCTCGCTTGCGCCTCCTCGGACGGACATGTTAG
CGTTCTTGAGTTCCGTGACAATAGCTGGACTCACCAGATCTTCCACGCCC
ACGGTATGGGCGTGAACTCTATCAGCTGGGCACCTGCAGCCGCCCCGGGC
AGCTTGATCAGCTCCAACCCTGGACCGGGCCAGCAGCGGAGATTCGTCAC
TGGTGGAAGCGACAACCTGCTGAAGATCTGGGACTACAAACATGAAGGAG
CTGTGTGGTGTGTGGCTTGGCACGATGCCGGCCTGGACTACTACGGCCGC
AGATTGGCAACATGTTCATCGGACAAAACGATAAAGATCTTTGAAATCGA
AGGAGAGACACATCGGTTGATTGAGACATTGAAGGGGCTGCTCAAGTAAT
CTCCAATTCCGGACACGATGAGATGATTATGCCCGGAAACCAAGACCTAC
AACAACACGCAGACTCTCGAAGGCCACTCCGACTGGGTTCGGGATGTCGC
TTGGTCGCCTAGCGTTCTTTCCAAGTCCTACATCGCCTCTGCCTCTCAAG
ACAAGACAGTCCGGATCTGGACTTCCGATGCGTCAAACCCTGGTCAGTGG
ACCAGCCAGCAACTTGAGTTCGACACTGTACTCTGGCGAGTTAGCTGGAG
CCCTAGTGGAAACATTCTTGCTGTGAGCGGTGGCGATAACAAGGTCAGCT
TGTGGAAGGAAAACCTCAAGGGGCAATGGGAGAAGGTAAAGGATATCGAG
GAGTAGGCGCACCCTAAGTTCGGAACTATCCTCGCTTCCTCCTCGTACGA
TGGAAAGGTGCTCATCTGGCGCGAACAACACCAGAACGCCACGTCACCCG
TCGCTGGCGGCGCTTGGACGAAGGTGTTCGACTTCTCTCTACACACCGCT
TCAGTGAACATGGTCTCCTGGGCTCCGCATGAAAGTGGCTGTCTCCTCGC
TTGCGCCTCCTCGGACGGACATGTTAGCGTTCTTGAGTTCCGTGACAATA
GCTGGACTCACCAGATCTTCCACGCCCACGGTATGGGCGTGAACTCTATC
AGCTGGGCACCTGCAGCCGCCCCGGGCAGCTTGATCAGCTCCAACCCTGG
ACCGGGCCAGCAGCGGAGATTCGTCACTGGTGGAAGCGACAACCTGCTGA
AGATCTGGGACTACAAACATGAAGGAGCTGTGTGGTGTGTGGCTTGGCAC
GATGCCGGCCTGGACTACTACGGCCGCAGATTGGCAACATGTTCATCGGA
CAAAACGATAAAGATCTTTGAAATCGAAGGAGAGACACATCGGTTGATTG
AGACATTGAAGGGGCTGCTCAAGTAATCTCCAATTCCGGACACGATGAGA
TGATTATGCCCGGAAACCAAGACCTACAACAACACGCAGACTCTCGAAGG
CCACTCCGACTGGGTTCGGGATGTCGCTTGGTCGCCTAGCGTTCTTTCCA
AGTCCTACATCGCCTCTGCCTCTCAAGACAAGACAGTCCGGATCTGGACT
TCCGATGCGTCAAACCCTGGTCAGTGGACCAGCCAGCAACTTGAGTTCGA
CACTGTACTCTGGCGAGTTAGCTGGAGCCCTAGTGGAAACATTCTTGCTG
TGAGCGGTGGCGATAACAAGGTCAGCTTGTGGAAGGAAAACCTCAAGGGG
CAATGGGAGAAGGTAAAGGATATCGAGGAGTAGGCGCACCCTAAGTTCGG
AACTATCCTCGCTTCCTCCTCGTACGATGGAAAGGTGCTCATCTGGCGCG
AACAACACCAGAACGCCACGTCACCCGTCGCTGGCGGCGCTTGGACGAAG
GTGTTCGACTTCTCTCTACACACCGCTTCAGTGAACATGGTCTCCTGGGC
TCCGCATGAAAGTGGCTGTCTCCTCGCTTGCGCCTCCTCGGACGGACATG
TTAGCGTTCTTGAGTTCCGTGACAATAGCTGGACTCACCAGATCTTCCAC
GCCCACGGTATGGGCGTGAACTCTATCAGCTGGGCACCTGCAGCCGCCCC
GGGCAGCTTGATCAGCTCCAACCCTGGACCGGGCCAGCAGCGGAGATTCG
TCACTGGTGGAAGCGACAACCTGCTGAAGATCTGGGACTACAAACATGAA
GGAGCTGTGTGGTGTGTGGCTTGGCACGATGCCGGCCTGGACTACTACGG
CCGCAGATTGGCAACATGTTCATCGGACAAAACGATAAAGATCTTTGAAA
TCGAAGGAGAGACACATCGGTTGATTGAGACATTGAAGGGGCTGCTCAAG
TAATCTCCAATTCCGGACACGATGAGATGATTATGCCCGGAAACCAAGAC
CTACAACAACACGCAGACTCTCGAAGGCCACTCCGACTGGGTTCGGGATG
TCGCTTGGTCGCCTAGCGTTCTTTCCAAGTCCTACATCGCCTCTGCCTCT
CAAGACAAGACAGTCCGGATCTGGACTTCCGATGCGTCAAACCCTGGTCA
GTGGACCAGCCAGCAACTTGAGTTCGACACTGTACTCTGGCGAGTTAGCT
GGAGCCCTAGTGGAAACATTCTTGCTGTGAGCGGTGGCGATAACAAGGTC
AGCTTGTGGAAGGAAAACCTCAAGGGGCAATGGGAGAAGGTAAAGGATAT
CGAGGAGTAGGCGCACCCTAAGTTCGGAACTATCCTCGCTTCCTCCTCGT
ACGATGGAAAGGTGCTCATCTGGCGCGAACAACACCAGAACGCCACGTCA
CCCGTCGCTGGCGGCGCTTGGACGAAGGTGTTCGACTTCTCTCTACACAC
CGCTTCAGTGAACATGGTCTCCTGGGCTCCGCATGAAAGTGGCTGTCTCC
TCGCTTGCGCCTCCTCGGACGGACATGTTAGCGTTCTTGAGTTCCGTGAC
AATAGCTGGACTCACCAGATCTTCCACGCCCACGGTATGGGCGTGAACTC
TATCAGCTGGGCACCTGCAGCCGCCCCGGGCAGCTTGATCAGCTCCAACC
CTGGACCGGGCCAGCAGCGGAGATTCGTCACTGGTGGAAGCGACAACCTG
CTGAAGATCTGGGACTACAAACATGAAGGAGCTGTGTGGTGTGTGGCTTG
GCACGATGCCGGCCTGGACTACTACGGCCGCAGATTGGCAACATGTTCAT
CGGACAAAACGATAAAGATCTTTGAAATCGAAGGAGAGACACATCGGTTG
ATTGAGACATTGAAGGGGCTGCTCAAGTAATCTCCAATTCCGGACACGAT
GAGATGATTATG
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Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Molecular Function
TermDefinition
GO:0005515protein binding
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
SEC13ATCC64974_76630Aspergillus niger N402gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
ATCC64974_76630-T1ATCC64974_76630-T1-proteinAspergillus niger N402polypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ATCC64974_76630-T1.cdsATCC64974_76630-T1.cdsAspergillus niger N402CDS


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ATCC64974_76630-T1.exon6ATCC64974_76630-T1.exon6Aspergillus niger N402exon
ATCC64974_76630-T1.exon5ATCC64974_76630-T1.exon5Aspergillus niger N402exon
ATCC64974_76630-T1.exon4ATCC64974_76630-T1.exon4Aspergillus niger N402exon
ATCC64974_76630-T1.exon3ATCC64974_76630-T1.exon3Aspergillus niger N402exon
ATCC64974_76630-T1.exon2ATCC64974_76630-T1.exon2Aspergillus niger N402exon
ATCC64974_76630-T1.exon1ATCC64974_76630-T1.exon1Aspergillus niger N402exon


Properties
Property NameValue
DBxrefInterPro:IPR036322
DBxrefInterPro:IPR017986
DBxrefInterPro:IPR015943
DBxrefInterPro:IPR001680
DBxrefInterPro:IPR020472
DBxrefPFAM:PF00400
ProductGTPase-activating protein S13
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger N402 whole genome analysis2021-11-01
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
OGUI01000013.1supercontigOGUI01000013.1:973657..974953 -
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