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ATCC64974_77240-T1, ATCC64974_77240-T1 (mRNA) Aspergillus niger N402

Overview
NameATCC64974_77240-T1
Unique NameATCC64974_77240-T1
TypemRNA
OrganismAspergillus niger N402
Sequences
The following sequences are available for this feature:

mRNA from alignment at OGUI01000013.1:1206815..1207502-

Legend: polypeptideCDSexon
Hold the cursor over a type above to highlight its positions in the sequence below.
>ATCC64974_77240-T1 ID=ATCC64974_77240-T1|Name=ATCC64974_77240-T1|organism=Aspergillus niger N402|type=mRNA|length=688bp|location=Sequence derived from alignment at OGUI01000013.1:1206815..1207502- (Aspergillus niger N402)
ATGCTGACCATCCCTGCACTGTTGGACCACTACTCCAACCCAAGTAGGTA
GCTTCCTGCATCCATCCCTCTCGACAACATCACGTCGCATCAAAATATAC
AACACGCAGCGCTTGCAAATCACGCTCACCAGACATATACGAACAAACGT
GAAAATGAATACTAACGAGCATCCCTGTAGGAAACGTCGGCTCCATGGCC
AAGTCGATGGACGTTGGTACCGGACTCGTCGGCGCCCCGGCCTGTGGCGA
TGTCATGAAACTCCAGATCCGCGTCGACAAGGACAGCAACAAGATTAGCG
ACGTCAAGTTCAAGACTTTCGGTTGCGGTAGCGCTATTGCCAGCTCGAGT
TATCTGACTGAGCTGGTCCGTGGAATGACCCTCGACGAGGCCGCTAAGAT
CCGTAACACCGATATCGCCAAGGAGTTGTGCTTGCCCCCTGTTAAGCGTA
TGTTTATCCCTTGCTACTGTGGAGACGAGAGGATTGGAAGAAATCGGGGG
AGAAATGATAAAGCTAACATATTCTGATAGTGCACTGCTCCATGCTTGCC
GAAGACGCCATCAAGTCCGCCATCTCGGATTACTACACCAAGAACCCTCG
CACCGTGAAGACCGATCTGTCCGGCACGGGTGCTTCTATCCCGGAAGTGC
AGGTGGAGGTTGAGAAGACCAGCAGCGCAACTGCTTAA
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Coding sequence (CDS) from alignment at OGUI01000013.1:1206815..1207502-

>ATCC64974_77240-T1 ID=ATCC64974_77240-T1|Name=ATCC64974_77240-T1|organism=Aspergillus niger N402|type=CDS|length=1404bp|location=Sequence derived from alignment at OGUI01000013.1:1206815..1207502- (Aspergillus niger N402)
TGCACTGCTCCATGCTTGCCGAAGACGCCATCAAGTCCGCCATCTCGGAT
TACTACACCAAGAACCCTCGCACCGTGAAGACCGATCTGTCCGGCACGGG
TGCTTCTATCCCGGAAGTGCAGGTGGAGGTTGAGAAGACCAGCAGCGCAA
CTGCTTAAGAAACGTCGGCTCCATGGCCAAGTCGATGGACGTTGGTACCG
GACTCGTCGGCGCCCCGGCCTGTGGCGATGTCATGAAACTCCAGATCCGC
GTCGACAAGGACAGCAACAAGATTAGCGACGTCAAGTTCAAGACTTTCGG
TTGCGGTAGCGCTATTGCCAGCTCGAGTTATCTGACTGAGCTGGTCCGTG
GAATGACCCTCGACGAGGCCGCTAAGATCCGTAACACCGATATCGCCAAG
GAGTTGTGCTTGCCCCCTGTTAAGCATGCTGACCATCCCTGCACTGTTGG
ACCACTACTCCAACCCAATGCACTGCTCCATGCTTGCCGAAGACGCCATC
AAGTCCGCCATCTCGGATTACTACACCAAGAACCCTCGCACCGTGAAGAC
CGATCTGTCCGGCACGGGTGCTTCTATCCCGGAAGTGCAGGTGGAGGTTG
AGAAGACCAGCAGCGCAACTGCTTAAGAAACGTCGGCTCCATGGCCAAGT
CGATGGACGTTGGTACCGGACTCGTCGGCGCCCCGGCCTGTGGCGATGTC
ATGAAACTCCAGATCCGCGTCGACAAGGACAGCAACAAGATTAGCGACGT
CAAGTTCAAGACTTTCGGTTGCGGTAGCGCTATTGCCAGCTCGAGTTATC
TGACTGAGCTGGTCCGTGGAATGACCCTCGACGAGGCCGCTAAGATCCGT
AACACCGATATCGCCAAGGAGTTGTGCTTGCCCCCTGTTAAGCATGCTGA
CCATCCCTGCACTGTTGGACCACTACTCCAACCCAATGCACTGCTCCATG
CTTGCCGAAGACGCCATCAAGTCCGCCATCTCGGATTACTACACCAAGAA
CCCTCGCACCGTGAAGACCGATCTGTCCGGCACGGGTGCTTCTATCCCGG
AAGTGCAGGTGGAGGTTGAGAAGACCAGCAGCGCAACTGCTTAAGAAACG
TCGGCTCCATGGCCAAGTCGATGGACGTTGGTACCGGACTCGTCGGCGCC
CCGGCCTGTGGCGATGTCATGAAACTCCAGATCCGCGTCGACAAGGACAG
CAACAAGATTAGCGACGTCAAGTTCAAGACTTTCGGTTGCGGTAGCGCTA
TTGCCAGCTCGAGTTATCTGACTGAGCTGGTCCGTGGAATGACCCTCGAC
GAGGCCGCTAAGATCCGTAACACCGATATCGCCAAGGAGTTGTGCTTGCC
CCCTGTTAAGCATGCTGACCATCCCTGCACTGTTGGACCACTACTCCAAC
CCAA
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Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Biological Process
TermDefinition
GO:0016226iron-sulfur cluster assembly
Vocabulary: Molecular Function
TermDefinition
GO:0051536iron-sulfur cluster binding
GO:0005506iron ion binding
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
ISU2ATCC64974_77240Aspergillus niger N402gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
ATCC64974_77240-T1ATCC64974_77240-T1-proteinAspergillus niger N402polypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ATCC64974_77240-T1.cdsATCC64974_77240-T1.cdsAspergillus niger N402CDS


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ATCC64974_77240-T1.exon3ATCC64974_77240-T1.exon3Aspergillus niger N402exon
ATCC64974_77240-T1.exon2ATCC64974_77240-T1.exon2Aspergillus niger N402exon
ATCC64974_77240-T1.exon1ATCC64974_77240-T1.exon1Aspergillus niger N402exon


Properties
Property NameValue
NoteantiSMASH:Cluster_10000131.7
DBxrefInterPro:IPR011339
DBxrefInterPro:IPR002871
DBxrefPFAM:PF01592
Productiron-sulfur cluster nifu-like protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger N402 whole genome analysis2021-11-01
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
OGUI01000013.1supercontigOGUI01000013.1:1206815..1207502 -
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