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ATCC64974_77330-T1, ATCC64974_77330-T1 (mRNA) Aspergillus niger N402

Overview
NameATCC64974_77330-T1
Unique NameATCC64974_77330-T1
TypemRNA
OrganismAspergillus niger N402
Sequences
The following sequences are available for this feature:

mRNA from alignment at OGUI01000013.1:1238018..1239918-

Legend: polypeptideCDSexon
Hold the cursor over a type above to highlight its positions in the sequence below.
>ATCC64974_77330-T1 ID=ATCC64974_77330-T1|Name=ATCC64974_77330-T1|organism=Aspergillus niger N402|type=mRNA|length=1901bp|location=Sequence derived from alignment at OGUI01000013.1:1238018..1239918- (Aspergillus niger N402)
ATGATGCCCAACTCCACAGGGGCGATCACCGCAAACCCATTCGAAGAGCC
ACAGCGACGGATCAACGAGTACACTGCCCAGGAAATCGCAACTTTGCAAG
CTCGTCTCGATAAGAAGCTCGGCCCCGAATACATCTCTTCCAGGCCTGGG
GCTGCGGGACAGAGAGTACACTACTTGTCGGCCGATAAATGCATCAACCT
GGCTAACGAAGTTTTCGGGTTCAATGGCTGGTCAAGCTCGATTCAGAATA
TTCAGATTGATTTCGTCGAGGAGAGTCCCAATACTGGGAAGATCAGCCTG
GGTCTCTCTGTTATTGTGAGGGTGACTCTGAAAGATGGTACATATCACGA
GGTAGGCATCACTGTATTGCAGCGAGCTTGCCCTATATCTCAGCTAAGTC
TCGAGTGGTATTAGGATATCGGTTACGGTCACATCGAGAACTGTAAAGGG
AAGGCTGCTGCTTTTGAGAAAGCTAAGAAAGAGGGGACAACCGATGCTCT
AAAGCGGGCTCTGAGGAACTTCGGCAATGTCCTGGGCAACTGTGTCTACG
ATAAGGACTATGTGTCGAAGGTCACCAAAGTAAAGACTGTTCCGGTATGT
GACCGAGGTGTGGACAATCTTTTCACGACGACTGACACGCTCTAGGCCAA
ATGGGATGTCGACGAACTGCACCGTCACCCAGACTTTGTTCCCAGGAAAG
AGCCCGTAAAACCAAAGCCCAGCCCGGAAGACGATGATCTACCACCTCGG
CCAACGGACGTTGGCAAGAGCAGTAGTATCGACGATTCGATGGCATTTGA
TGGCGACGGGGAGTTCGGAAGTAAGCAACAATGGCATGTCACGATCCCTT
ACAACCGCTAACCACCATCATAGGTGACCTATTTGATGAAGCCGACTTCG
GGGTAGGCGGAACAGGCAACCCAGACGAGGTAGTACTAGGACCAGAAACA
CAGAAGCAGCCACCGACGCCTCTAAATGGACCCAATGTACCTCGACAGCC
ATTCAATAACAACGCCCGTGCACCGATGAGGCCCAACCCAGCCATGGTAA
CTCCATCTAAGCCGGAACGGCCCTTCAACCCAGCTCCTGGTGCCAGACAA
AATCCCGCTCCTCAGCCCTTTAACAGCAGACTCAACCCCTCCGCAGCCCA
AAATCAGCAAGCACCTCAACGACAACCCATGGCCCCTCAAGGGCCCCAGC
AAAACCTCCCCAACAACCGAATGATCCCACCAGCACAAGCAGCAGCAGCC
GCATCAACCACAGGTGGTGCCGTGCCCATCAAACGTGAATTCGGGGCATC
GACCATCAACGAACCTCCCAGACCCCAAGACACACTGCCCGGCACGCCCT
CCGCATCATTCTTCTCAGCTCGCGCAGTCGACCTCCTCCGCGACAACCCT
AACGGGATCCCATCCGGAGCCCCAGTCTTCGACCCACACGCGGAGAGTCC
CTCCATCCGCAAGACTGCAGGCATCGACCACAACAAGAGTCTTCCTGTCT
CCAGGCCCATGCTCGCCGGTGCCGGCGCCGCCTCCCCAGCAACCAATAAC
ACCCGAGACTTCGTCAACCCATCTCAAGATATGAATCGCAGGATCGGTGC
CCCGGGCATGAACAGTCCCATGAACAGACCCATGTCCACATCATCTTACC
GGCCCTTGACACGGCCAAATATCAATGCCCCGGGTGCAGCTGCGGCCGCC
AATCGTGCAACTACCCCGGGTCTTGCACCGCAGAACGTGAACGGGAAACG
ACCCCCTCTGTCTGATGTGACGAATGCCTCGAACCCGAGTGGCGGCAGCG
GGCCTGCTCCACCGGGGGTCAGTGAGAATGACCCGAAACGACCCAAGGTA
AACCCGGGTTCTACTGCTGCGGCGGCGCCGCCGCAGCAGCAGCAGCAGTG
A
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Coding sequence (CDS) from alignment at OGUI01000013.1:1238018..1239918-

>ATCC64974_77330-T1 ID=ATCC64974_77330-T1|Name=ATCC64974_77330-T1|organism=Aspergillus niger N402|type=CDS|length=6936bp|location=Sequence derived from alignment at OGUI01000013.1:1238018..1239918- (Aspergillus niger N402)
GTGACCTATTTGATGAAGCCGACTTCGGGGTAGGCGGAACAGGCAACCCA
GACGAGGTAGTACTAGGACCAGAAACACAGAAGCAGCCACCGACGCCTCT
AAATGGACCCAATGTACCTCGACAGCCATTCAATAACAACGCCCGTGCAC
CGATGAGGCCCAACCCAGCCATGGTAACTCCATCTAAGCCGGAACGGCCC
TTCAACCCAGCTCCTGGTGCCAGACAAAATCCCGCTCCTCAGCCCTTTAA
CAGCAGACTCAACCCCTCCGCAGCCCAAAATCAGCAAGCACCTCAACGAC
AACCCATGGCCCCTCAAGGGCCCCAGCAAAACCTCCCCAACAACCGAATG
ATCCCACCAGCACAAGCAGCAGCAGCCGCATCAACCACAGGTGGTGCCGT
GCCCATCAAACGTGAATTCGGGGCATCGACCATCAACGAACCTCCCAGAC
CCCAAGACACACTGCCCGGCACGCCCTCCGCATCATTCTTCTCAGCTCGC
GCAGTCGACCTCCTCCGCGACAACCCTAACGGGATCCCATCCGGAGCCCC
AGTCTTCGACCCACACGCGGAGAGTCCCTCCATCCGCAAGACTGCAGGCA
TCGACCACAACAAGAGTCTTCCTGTCTCCAGGCCCATGCTCGCCGGTGCC
GGCGCCGCCTCCCCAGCAACCAATAACACCCGAGACTTCGTCAACCCATC
TCAAGATATGAATCGCAGGATCGGTGCCCCGGGCATGAACAGTCCCATGA
ACAGACCCATGTCCACATCATCTTACCGGCCCTTGACACGGCCAAATATC
AATGCCCCGGGTGCAGCTGCGGCCGCCAATCGTGCAACTACCCCGGGTCT
TGCACCGCAGAACGTGAACGGGAAACGACCCCCTCTGTCTGATGTGACGA
ATGCCTCGAACCCGAGTGGCGGCAGCGGGCCTGCTCCACCGGGGGTCAGT
GAGAATGACCCGAAACGACCCAAGGTAAACCCGGGTTCTACTGCTGCGGC
GGCGCCGCCGCAGCAGCAGCAGCAGTGAGCCAAATGGGATGTCGACGAAC
TGCACCGTCACCCAGACTTTGTTCCCAGGAAAGAGCCCGTAAAACCAAAG
CCCAGCCCGGAAGACGATGATCTACCACCTCGGCCAACGGACGTTGGCAA
GAGCAGTAGTATCGACGATTCGATGGCATTTGATGGCGACGGGGAGTTCG
GAAGATATCGGTTACGGTCACATCGAGAACTGTAAAGGGAAGGCTGCTGC
TTTTGAGAAAGCTAAGAAAGAGGGGACAACCGATGCTCTAAAGCGGGCTC
TGAGGAACTTCGGCAATGTCCTGGGCAACTGTGTCTACGATAAGGACTAT
GTGTCGAAGGTCACCAAAGTAAAGACTGTTCCGATGATGCCCAACTCCAC
AGGGGCGATCACCGCAAACCCATTCGAAGAGCCACAGCGACGGATCAACG
AGTACACTGCCCAGGAAATCGCAACTTTGCAAGCTCGTCTCGATAAGAAG
CTCGGCCCCGAATACATCTCTTCCAGGCCTGGGGCTGCGGGACAGAGAGT
ACACTACTTGTCGGCCGATAAATGCATCAACCTGGCTAACGAAGTTTTCG
GGTTCAATGGCTGGTCAAGCTCGATTCAGAATATTCAGATTGATTTCGTC
GAGGAGAGTCCCAATACTGGGAAGATCAGCCTGGGTCTCTCTGTTATTGT
GAGGGTGACTCTGAAAGATGGTACATATCACGAGGTGACCTATTTGATGA
AGCCGACTTCGGGGTAGGCGGAACAGGCAACCCAGACGAGGTAGTACTAG
GACCAGAAACACAGAAGCAGCCACCGACGCCTCTAAATGGACCCAATGTA
CCTCGACAGCCATTCAATAACAACGCCCGTGCACCGATGAGGCCCAACCC
AGCCATGGTAACTCCATCTAAGCCGGAACGGCCCTTCAACCCAGCTCCTG
GTGCCAGACAAAATCCCGCTCCTCAGCCCTTTAACAGCAGACTCAACCCC
TCCGCAGCCCAAAATCAGCAAGCACCTCAACGACAACCCATGGCCCCTCA
AGGGCCCCAGCAAAACCTCCCCAACAACCGAATGATCCCACCAGCACAAG
CAGCAGCAGCCGCATCAACCACAGGTGGTGCCGTGCCCATCAAACGTGAA
TTCGGGGCATCGACCATCAACGAACCTCCCAGACCCCAAGACACACTGCC
CGGCACGCCCTCCGCATCATTCTTCTCAGCTCGCGCAGTCGACCTCCTCC
GCGACAACCCTAACGGGATCCCATCCGGAGCCCCAGTCTTCGACCCACAC
GCGGAGAGTCCCTCCATCCGCAAGACTGCAGGCATCGACCACAACAAGAG
TCTTCCTGTCTCCAGGCCCATGCTCGCCGGTGCCGGCGCCGCCTCCCCAG
CAACCAATAACACCCGAGACTTCGTCAACCCATCTCAAGATATGAATCGC
AGGATCGGTGCCCCGGGCATGAACAGTCCCATGAACAGACCCATGTCCAC
ATCATCTTACCGGCCCTTGACACGGCCAAATATCAATGCCCCGGGTGCAG
CTGCGGCCGCCAATCGTGCAACTACCCCGGGTCTTGCACCGCAGAACGTG
AACGGGAAACGACCCCCTCTGTCTGATGTGACGAATGCCTCGAACCCGAG
TGGCGGCAGCGGGCCTGCTCCACCGGGGGTCAGTGAGAATGACCCGAAAC
GACCCAAGGTAAACCCGGGTTCTACTGCTGCGGCGGCGCCGCCGCAGCAG
CAGCAGCAGTGAGCCAAATGGGATGTCGACGAACTGCACCGTCACCCAGA
CTTTGTTCCCAGGAAAGAGCCCGTAAAACCAAAGCCCAGCCCGGAAGACG
ATGATCTACCACCTCGGCCAACGGACGTTGGCAAGAGCAGTAGTATCGAC
GATTCGATGGCATTTGATGGCGACGGGGAGTTCGGAAGATATCGGTTACG
GTCACATCGAGAACTGTAAAGGGAAGGCTGCTGCTTTTGAGAAAGCTAAG
AAAGAGGGGACAACCGATGCTCTAAAGCGGGCTCTGAGGAACTTCGGCAA
TGTCCTGGGCAACTGTGTCTACGATAAGGACTATGTGTCGAAGGTCACCA
AAGTAAAGACTGTTCCGATGATGCCCAACTCCACAGGGGCGATCACCGCA
AACCCATTCGAAGAGCCACAGCGACGGATCAACGAGTACACTGCCCAGGA
AATCGCAACTTTGCAAGCTCGTCTCGATAAGAAGCTCGGCCCCGAATACA
TCTCTTCCAGGCCTGGGGCTGCGGGACAGAGAGTACACTACTTGTCGGCC
GATAAATGCATCAACCTGGCTAACGAAGTTTTCGGGTTCAATGGCTGGTC
AAGCTCGATTCAGAATATTCAGATTGATTTCGTCGAGGAGAGTCCCAATA
CTGGGAAGATCAGCCTGGGTCTCTCTGTTATTGTGAGGGTGACTCTGAAA
GATGGTACATATCACGAGGTGACCTATTTGATGAAGCCGACTTCGGGGTA
GGCGGAACAGGCAACCCAGACGAGGTAGTACTAGGACCAGAAACACAGAA
GCAGCCACCGACGCCTCTAAATGGACCCAATGTACCTCGACAGCCATTCA
ATAACAACGCCCGTGCACCGATGAGGCCCAACCCAGCCATGGTAACTCCA
TCTAAGCCGGAACGGCCCTTCAACCCAGCTCCTGGTGCCAGACAAAATCC
CGCTCCTCAGCCCTTTAACAGCAGACTCAACCCCTCCGCAGCCCAAAATC
AGCAAGCACCTCAACGACAACCCATGGCCCCTCAAGGGCCCCAGCAAAAC
CTCCCCAACAACCGAATGATCCCACCAGCACAAGCAGCAGCAGCCGCATC
AACCACAGGTGGTGCCGTGCCCATCAAACGTGAATTCGGGGCATCGACCA
TCAACGAACCTCCCAGACCCCAAGACACACTGCCCGGCACGCCCTCCGCA
TCATTCTTCTCAGCTCGCGCAGTCGACCTCCTCCGCGACAACCCTAACGG
GATCCCATCCGGAGCCCCAGTCTTCGACCCACACGCGGAGAGTCCCTCCA
TCCGCAAGACTGCAGGCATCGACCACAACAAGAGTCTTCCTGTCTCCAGG
CCCATGCTCGCCGGTGCCGGCGCCGCCTCCCCAGCAACCAATAACACCCG
AGACTTCGTCAACCCATCTCAAGATATGAATCGCAGGATCGGTGCCCCGG
GCATGAACAGTCCCATGAACAGACCCATGTCCACATCATCTTACCGGCCC
TTGACACGGCCAAATATCAATGCCCCGGGTGCAGCTGCGGCCGCCAATCG
TGCAACTACCCCGGGTCTTGCACCGCAGAACGTGAACGGGAAACGACCCC
CTCTGTCTGATGTGACGAATGCCTCGAACCCGAGTGGCGGCAGCGGGCCT
GCTCCACCGGGGGTCAGTGAGAATGACCCGAAACGACCCAAGGTAAACCC
GGGTTCTACTGCTGCGGCGGCGCCGCCGCAGCAGCAGCAGCAGTGAGCCA
AATGGGATGTCGACGAACTGCACCGTCACCCAGACTTTGTTCCCAGGAAA
GAGCCCGTAAAACCAAAGCCCAGCCCGGAAGACGATGATCTACCACCTCG
GCCAACGGACGTTGGCAAGAGCAGTAGTATCGACGATTCGATGGCATTTG
ATGGCGACGGGGAGTTCGGAAGATATCGGTTACGGTCACATCGAGAACTG
TAAAGGGAAGGCTGCTGCTTTTGAGAAAGCTAAGAAAGAGGGGACAACCG
ATGCTCTAAAGCGGGCTCTGAGGAACTTCGGCAATGTCCTGGGCAACTGT
GTCTACGATAAGGACTATGTGTCGAAGGTCACCAAAGTAAAGACTGTTCC
GATGATGCCCAACTCCACAGGGGCGATCACCGCAAACCCATTCGAAGAGC
CACAGCGACGGATCAACGAGTACACTGCCCAGGAAATCGCAACTTTGCAA
GCTCGTCTCGATAAGAAGCTCGGCCCCGAATACATCTCTTCCAGGCCTGG
GGCTGCGGGACAGAGAGTACACTACTTGTCGGCCGATAAATGCATCAACC
TGGCTAACGAAGTTTTCGGGTTCAATGGCTGGTCAAGCTCGATTCAGAAT
ATTCAGATTGATTTCGTCGAGGAGAGTCCCAATACTGGGAAGATCAGCCT
GGGTCTCTCTGTTATTGTGAGGGTGACTCTGAAAGATGGTACATATCACG
AGGTGACCTATTTGATGAAGCCGACTTCGGGGTAGGCGGAACAGGCAACC
CAGACGAGGTAGTACTAGGACCAGAAACACAGAAGCAGCCACCGACGCCT
CTAAATGGACCCAATGTACCTCGACAGCCATTCAATAACAACGCCCGTGC
ACCGATGAGGCCCAACCCAGCCATGGTAACTCCATCTAAGCCGGAACGGC
CCTTCAACCCAGCTCCTGGTGCCAGACAAAATCCCGCTCCTCAGCCCTTT
AACAGCAGACTCAACCCCTCCGCAGCCCAAAATCAGCAAGCACCTCAACG
ACAACCCATGGCCCCTCAAGGGCCCCAGCAAAACCTCCCCAACAACCGAA
TGATCCCACCAGCACAAGCAGCAGCAGCCGCATCAACCACAGGTGGTGCC
GTGCCCATCAAACGTGAATTCGGGGCATCGACCATCAACGAACCTCCCAG
ACCCCAAGACACACTGCCCGGCACGCCCTCCGCATCATTCTTCTCAGCTC
GCGCAGTCGACCTCCTCCGCGACAACCCTAACGGGATCCCATCCGGAGCC
CCAGTCTTCGACCCACACGCGGAGAGTCCCTCCATCCGCAAGACTGCAGG
CATCGACCACAACAAGAGTCTTCCTGTCTCCAGGCCCATGCTCGCCGGTG
CCGGCGCCGCCTCCCCAGCAACCAATAACACCCGAGACTTCGTCAACCCA
TCTCAAGATATGAATCGCAGGATCGGTGCCCCGGGCATGAACAGTCCCAT
GAACAGACCCATGTCCACATCATCTTACCGGCCCTTGACACGGCCAAATA
TCAATGCCCCGGGTGCAGCTGCGGCCGCCAATCGTGCAACTACCCCGGGT
CTTGCACCGCAGAACGTGAACGGGAAACGACCCCCTCTGTCTGATGTGAC
GAATGCCTCGAACCCGAGTGGCGGCAGCGGGCCTGCTCCACCGGGGGTCA
GTGAGAATGACCCGAAACGACCCAAGGTAAACCCGGGTTCTACTGCTGCG
GCGGCGCCGCCGCAGCAGCAGCAGCAGTGAGCCAAATGGGATGTCGACGA
ACTGCACCGTCACCCAGACTTTGTTCCCAGGAAAGAGCCCGTAAAACCAA
AGCCCAGCCCGGAAGACGATGATCTACCACCTCGGCCAACGGACGTTGGC
AAGAGCAGTAGTATCGACGATTCGATGGCATTTGATGGCGACGGGGAGTT
CGGAAGATATCGGTTACGGTCACATCGAGAACTGTAAAGGGAAGGCTGCT
GCTTTTGAGAAAGCTAAGAAAGAGGGGACAACCGATGCTCTAAAGCGGGC
TCTGAGGAACTTCGGCAATGTCCTGGGCAACTGTGTCTACGATAAGGACT
ATGTGTCGAAGGTCACCAAAGTAAAGACTGTTCCGATGATGCCCAACTCC
ACAGGGGCGATCACCGCAAACCCATTCGAAGAGCCACAGCGACGGATCAA
CGAGTACACTGCCCAGGAAATCGCAACTTTGCAAGCTCGTCTCGATAAGA
AGCTCGGCCCCGAATACATCTCTTCCAGGCCTGGGGCTGCGGGACAGAGA
GTACACTACTTGTCGGCCGATAAATGCATCAACCTGGCTAACGAAGTTTT
CGGGTTCAATGGCTGGTCAAGCTCGATTCAGAATATTCAGATTGATTTCG
TCGAGGAGAGTCCCAATACTGGGAAGATCAGCCTGGGTCTCTCTGTTATT
GTGAGGGTGACTCTGAAAGATGGTACATATCACGAG
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Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Cellular Component
TermDefinition
GO:0005634nucleus
Vocabulary: Biological Process
TermDefinition
GO:0000730DNA recombinase assembly
GO:0045002double-strand break repair via single-strand annealing
GO:0000724double-strand break repair via homologous recombination
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
ATCC64974_77330ATCC64974_77330Aspergillus niger N402gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
ATCC64974_77330-T1ATCC64974_77330-T1-proteinAspergillus niger N402polypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ATCC64974_77330-T1.cdsATCC64974_77330-T1.cdsAspergillus niger N402CDS


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ATCC64974_77330-T1.exon4ATCC64974_77330-T1.exon4Aspergillus niger N402exon
ATCC64974_77330-T1.exon3ATCC64974_77330-T1.exon3Aspergillus niger N402exon
ATCC64974_77330-T1.exon2ATCC64974_77330-T1.exon2Aspergillus niger N402exon
ATCC64974_77330-T1.exon1ATCC64974_77330-T1.exon1Aspergillus niger N402exon


Properties
Property NameValue
NoteBUSCO:EOG09261PJZ
DBxrefInterPro:IPR004585
DBxrefInterPro:IPR042525
DBxrefInterPro:IPR041247
DBxrefPFAM:PF04098
Producthypothetical protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger N402 whole genome analysis2021-11-01
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
OGUI01000013.1supercontigOGUI01000013.1:1238018..1239918 -
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