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ATCC64974_77410-T1, ATCC64974_77410-T1 (mRNA) Aspergillus niger N402

Overview
NameATCC64974_77410-T1
Unique NameATCC64974_77410-T1
TypemRNA
OrganismAspergillus niger N402
Sequences
The following sequences are available for this feature:

mRNA from alignment at OGUI01000013.1:1257232..1257960-

Legend: polypeptideCDSexon
Hold the cursor over a type above to highlight its positions in the sequence below.
>ATCC64974_77410-T1 ID=ATCC64974_77410-T1|Name=ATCC64974_77410-T1|organism=Aspergillus niger N402|type=mRNA|length=729bp|location=Sequence derived from alignment at OGUI01000013.1:1257232..1257960- (Aspergillus niger N402)
ATGTCGCTTTGCCAGAATCGTCTGACGGAGGAGAGGTATGTGGCTGACAA
CGTTGCATATGCCTCTTATGGCGTGTCATTCCTCAAACTAACCCCAAACG
CGACTATCTACAGAAAGCAGTGGCGCCGAGACCACCCTTTTGGCTTCTAT
GCAAAGCCGCATCGGACTCCTCAAGGAACACTTGACCTCAAACGATGGGA
GTGTGGTATCCCCGGAAAGGCGCAAACCCTCTGGGAAGGCGGGCTTTTCA
AGCTTGACGTTACTTTCCCCGATGGTGAGTGAAGTCTATCGACGGGTGCT
TTATGCGACAAACCTGCTAACCCGCGTTCTATCGCAGAATACCCCACTAA
GCCGCCGAAGTGTAGGTTCCCCTCTCTGCCGTACTATTCCCAACGCCACC
CTTCTGCGCTATTTGGTTTTCCCCCCTGTGGCACTTCTCGCACAGTAAGC
TAACCAGATCATCCACATTCAACAGGCAAATTCGTGCCTCCGCTTTTCCA
CCCCAACGTCTATCCATCCGGCACTGTGTGTCTTTCGATCTTGAACGAGG
AGGAGGCATGGAAGCCCGCAATCACGATCAAGCAGATCCTTCTTGGTATT
CAGGACCTGCTAGACGACCCCAACCCTGAGTCACCAGCTCAGGCTGAAGC
CTACAACTTGTTCAAGAAGGATCGGCCAGCGTATGAGAAGCGAGTTAGAC
AAGTCGTGAGGGAGAACCCGGCCCTTTAA
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Coding sequence (CDS) from alignment at OGUI01000013.1:1257232..1257960-

>ATCC64974_77410-T1 ID=ATCC64974_77410-T1|Name=ATCC64974_77410-T1|organism=Aspergillus niger N402|type=CDS|length=1896bp|location=Sequence derived from alignment at OGUI01000013.1:1257232..1257960- (Aspergillus niger N402)
GCAAATTCGTGCCTCCGCTTTTCCACCCCAACGTCTATCCATCCGGCACT
GTGTGTCTTTCGATCTTGAACGAGGAGGAGGCATGGAAGCCCGCAATCAC
GATCAAGCAGATCCTTCTTGGTATTCAGGACCTGCTAGACGACCCCAACC
CTGAGTCACCAGCTCAGGCTGAAGCCTACAACTTGTTCAAGAAGGATCGG
CCAGCGTATGAGAAGCGAGTTAGACAAGTCGTGAGGGAGAACCCGGCCCT
TTAAAATACCCCACTAAGCCGCCGAAGTAAAGCAGTGGCGCCGAGACCAC
CCTTTTGGCTTCTATGCAAAGCCGCATCGGACTCCTCAAGGAACACTTGA
CCTCAAACGATGGGAGTGTGGTATCCCCGGAAAGGCGCAAACCCTCTGGG
AAGGCGGGCTTTTCAAGCTTGACGTTACTTTCCCCGATGATGTCGCTTTG
CCAGAATCGTCTGACGGAGGAGAGGCAAATTCGTGCCTCCGCTTTTCCAC
CCCAACGTCTATCCATCCGGCACTGTGTGTCTTTCGATCTTGAACGAGGA
GGAGGCATGGAAGCCCGCAATCACGATCAAGCAGATCCTTCTTGGTATTC
AGGACCTGCTAGACGACCCCAACCCTGAGTCACCAGCTCAGGCTGAAGCC
TACAACTTGTTCAAGAAGGATCGGCCAGCGTATGAGAAGCGAGTTAGACA
AGTCGTGAGGGAGAACCCGGCCCTTTAAAATACCCCACTAAGCCGCCGAA
GTAAAGCAGTGGCGCCGAGACCACCCTTTTGGCTTCTATGCAAAGCCGCA
TCGGACTCCTCAAGGAACACTTGACCTCAAACGATGGGAGTGTGGTATCC
CCGGAAAGGCGCAAACCCTCTGGGAAGGCGGGCTTTTCAAGCTTGACGTT
ACTTTCCCCGATGATGTCGCTTTGCCAGAATCGTCTGACGGAGGAGAGGC
AAATTCGTGCCTCCGCTTTTCCACCCCAACGTCTATCCATCCGGCACTGT
GTGTCTTTCGATCTTGAACGAGGAGGAGGCATGGAAGCCCGCAATCACGA
TCAAGCAGATCCTTCTTGGTATTCAGGACCTGCTAGACGACCCCAACCCT
GAGTCACCAGCTCAGGCTGAAGCCTACAACTTGTTCAAGAAGGATCGGCC
AGCGTATGAGAAGCGAGTTAGACAAGTCGTGAGGGAGAACCCGGCCCTTT
AAAATACCCCACTAAGCCGCCGAAGTAAAGCAGTGGCGCCGAGACCACCC
TTTTGGCTTCTATGCAAAGCCGCATCGGACTCCTCAAGGAACACTTGACC
TCAAACGATGGGAGTGTGGTATCCCCGGAAAGGCGCAAACCCTCTGGGAA
GGCGGGCTTTTCAAGCTTGACGTTACTTTCCCCGATGATGTCGCTTTGCC
AGAATCGTCTGACGGAGGAGAGGCAAATTCGTGCCTCCGCTTTTCCACCC
CAACGTCTATCCATCCGGCACTGTGTGTCTTTCGATCTTGAACGAGGAGG
AGGCATGGAAGCCCGCAATCACGATCAAGCAGATCCTTCTTGGTATTCAG
GACCTGCTAGACGACCCCAACCCTGAGTCACCAGCTCAGGCTGAAGCCTA
CAACTTGTTCAAGAAGGATCGGCCAGCGTATGAGAAGCGAGTTAGACAAG
TCGTGAGGGAGAACCCGGCCCTTTAAAATACCCCACTAAGCCGCCGAAGT
AAAGCAGTGGCGCCGAGACCACCCTTTTGGCTTCTATGCAAAGCCGCATC
GGACTCCTCAAGGAACACTTGACCTCAAACGATGGGAGTGTGGTATCCCC
GGAAAGGCGCAAACCCTCTGGGAAGGCGGGCTTTTCAAGCTTGACGTTAC
TTTCCCCGATGATGTCGCTTTGCCAGAATCGTCTGACGGAGGAGAG
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Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
HUS5ATCC64974_77410Aspergillus niger N402gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
ATCC64974_77410-T1ATCC64974_77410-T1-proteinAspergillus niger N402polypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ATCC64974_77410-T1.cdsATCC64974_77410-T1.cdsAspergillus niger N402CDS


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ATCC64974_77410-T1.exon4ATCC64974_77410-T1.exon4Aspergillus niger N402exon
ATCC64974_77410-T1.exon3ATCC64974_77410-T1.exon3Aspergillus niger N402exon
ATCC64974_77410-T1.exon2ATCC64974_77410-T1.exon2Aspergillus niger N402exon
ATCC64974_77410-T1.exon1ATCC64974_77410-T1.exon1Aspergillus niger N402exon


Properties
Property NameValue
DBxrefInterPro:IPR023313
DBxrefInterPro:IPR016135
DBxrefInterPro:IPR000608
DBxrefPFAM:PF00179
ProductSUMO conjugating enzyme Hus5
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger N402 whole genome analysis2021-11-01
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
OGUI01000013.1supercontigOGUI01000013.1:1257232..1257960 -
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