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ATCC64974_77580-T1, ATCC64974_77580-T1 (mRNA) Aspergillus niger N402

Overview
NameATCC64974_77580-T1
Unique NameATCC64974_77580-T1
TypemRNA
OrganismAspergillus niger N402
Sequences
The following sequences are available for this feature:

mRNA from alignment at OGUI01000013.1:1310523..1311803+

Legend: exonpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>ATCC64974_77580-T1 ID=ATCC64974_77580-T1|Name=ATCC64974_77580-T1|organism=Aspergillus niger N402|type=mRNA|length=1281bp|location=Sequence derived from alignment at OGUI01000013.1:1310523..1311803+ (Aspergillus niger N402)
ATGGCTGCCTCCGCTGACAGTCAGGTCTTCCGGGCCACCACCACCGCCCC
CGTCAACATCGCCGTCATCAAGTATGTTCCCCCTCTACACTCACCGATAG
TACGTACGCTTGGTGGATTCTAATCGTTACTGAAAAGGTACTGGGGCAAG
CGCGATGCTGTTCTCAACCTTCCTACCAACTCCTCTCTCTCCGTCACCCT
TTCGCAGCGTTCCCTCCGCACGCTCACCACCGCTTCCTGCGCTCCTTTCT
ACCCCGCCAAGGACGAGCTCACCCTGAACGGCAAGCCCCAAGACATCCAA
TCCTCTAAGCGTACACTTGCTTGTCTGGCCAGCCTGCGCGCCCACCGTCG
CGAGCTCGAGGATGCAAACCCCTCGTTGCCCAAGCTGTCCAGCTTCCCTC
TTCGCATTGTTTCCGAGAACAACTTCCCCACCGCCGCCGGTCTCGCCAGT
TCGGCTGCCGGGTTTGCGGCCCTCGTTCGTGCCGTGGCAGACCTTTACCA
GCTGCCCCAGTCGCCCCGTGATCTGAGCCGCATCGCTCGTCAGGGCTCTG
GTTCCGCCTGCCGTTCTCTGATGGGTGGTTATGTCGCCTGGCGCGCTGGA
TCCTTGGAGGATGGAAGCGACAGTTTGGCAGAGGAGGTTGCGCCGCAGTC
TCACTGGCCTGAAATGCGTGCCCTCATCCTGGTTGTCAGTGCCGCAAAGA
AGGATGTCCCCAGCACTGAGGGTATGCAGACGACCGTCGCTACCTCGAAC
CTTTTTGCTACCCGCGCGAGCACTGTTGTTCCGGAGCGGATGGCTGCCAT
CGAGACCGCCATCCAGAACCGCGATTTCCCCGCCTTCGCAGAGATCACGA
TGCGCGACTCCAACAGCTTCCACGCCACTTGCTTGGACTCCTGGCCTCCG
ATCTTCTACATGAACGACATCTCTCGCGCTGCCGTCAGACTCGTCCATGA
TATTAACCGCGCAATCGGCCGGACCGTCTGCGCGTACACCTACGATGCGG
GCCCGAACGCTGTCATCTACTACCTTGAGAAGGATACCGAGCTTGTTGCC
GGTACCGTCAAGGCTATCCTTGGTGAAAAGACGGAGGGCTGGGAAGGTCC
CTTCTACACGCCTCTGAAGGACGTTACCACCCCCGGCGTGTCCCTGGATG
AGATCGACCCCCGCACCGTGGAGTCGCTCAAGGATGGCGTGAGCCGTGTG
ATCTTGACCGGTGTTGGCGAGGGCCCCATCTCAGTGGACCAGCATCTTGT
CAGTGAGAAGGGCGATATTCTTTCTGCCTAG
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Coding sequence (CDS) from alignment at OGUI01000013.1:1310523..1311803+

>ATCC64974_77580-T1 ID=ATCC64974_77580-T1|Name=ATCC64974_77580-T1|organism=Aspergillus niger N402|type=CDS|length=2430bp|location=Sequence derived from alignment at OGUI01000013.1:1310523..1311803+ (Aspergillus niger N402)
ATGGCTGCCTCCGCTGACAGTCAGGTCTTCCGGGCCACCACCACCGCCCC
CGTCAACATCGCCGTCATCAAGTACTGGGGCAAGCGCGATGCTGTTCTCA
ACCTTCCTACCAACTCCTCTCTCTCCGTCACCCTTTCGCAGCGTTCCCTC
CGCACGCTCACCACCGCTTCCTGCGCTCCTTTCTACCCCGCCAAGGACGA
GCTCACCCTGAACGGCAAGCCCCAAGACATCCAATCCTCTAAGCGTACAC
TTGCTTGTCTGGCCAGCCTGCGCGCCCACCGTCGCGAGCTCGAGGATGCA
AACCCCTCGTTGCCCAAGCTGTCCAGCTTCCCTCTTCGCATTGTTTCCGA
GAACAACTTCCCCACCGCCGCCGGTCTCGCCAGTTCGGCTGCCGGGTTTG
CGGCCCTCGTTCGTGCCGTGGCAGACCTTTACCAGCTGCCCCAGTCGCCC
CGTGATCTGAGCCGCATCGCTCGTCAGGGCTCTGGTTCCGCCTGCCGTTC
TCTGATGGGTGGTTATGTCGCCTGGCGCGCTGGATCCTTGGAGGATGGAA
GCGACAGTTTGGCAGAGGAGGTTGCGCCGCAGTCTCACTGGCCTGAAATG
CGTGCCCTCATCCTGGTTGTCAGTGCCGCAAAGAAGGATGTCCCCAGCAC
TGAGGGTATGCAGACGACCGTCGCTACCTCGAACCTTTTTGCTACCCGCG
CGAGCACTGTTGTTCCGGAGCGGATGGCTGCCATCGAGACCGCCATCCAG
AACCGCGATTTCCCCGCCTTCGCAGAGATCACGATGCGCGACTCCAACAG
CTTCCACGCCACTTGCTTGGACTCCTGGCCTCCGATCTTCTACATGAACG
ACATCTCTCGCGCTGCCGTCAGACTCGTCCATGATATTAACCGCGCAATC
GGCCGGACCGTCTGCGCGTACACCTACGATGCGGGCCCGAACGCTGTCAT
CTACTACCTTGAGAAGGATACCGAGCTTGTTGCCGGTACCGTCAAGGCTA
TCCTTGGTGAAAAGACGGAGGGCTGGGAAGGTCCCTTCTACACGCCTCTG
AAGGACGTTACCACCCCCGGCGTGTCCCTGGATGAGATCGACCCCCGCAC
CGTGGAGTCGCTCAAGGATGGCGTGAGCCGTGTGATCTTGACCGGTGTTG
GCGAGGGCCCCATCTCAGTGGACCAGCATCTTGTCAGTGAGAAGGGCGAT
ATTCTTTCTGCCTAGATGGCTGCCTCCGCTGACAGTCAGGTCTTCCGGGC
CACCACCACCGCCCCCGTCAACATCGCCGTCATCAAGTACTGGGGCAAGC
GCGATGCTGTTCTCAACCTTCCTACCAACTCCTCTCTCTCCGTCACCCTT
TCGCAGCGTTCCCTCCGCACGCTCACCACCGCTTCCTGCGCTCCTTTCTA
CCCCGCCAAGGACGAGCTCACCCTGAACGGCAAGCCCCAAGACATCCAAT
CCTCTAAGCGTACACTTGCTTGTCTGGCCAGCCTGCGCGCCCACCGTCGC
GAGCTCGAGGATGCAAACCCCTCGTTGCCCAAGCTGTCCAGCTTCCCTCT
TCGCATTGTTTCCGAGAACAACTTCCCCACCGCCGCCGGTCTCGCCAGTT
CGGCTGCCGGGTTTGCGGCCCTCGTTCGTGCCGTGGCAGACCTTTACCAG
CTGCCCCAGTCGCCCCGTGATCTGAGCCGCATCGCTCGTCAGGGCTCTGG
TTCCGCCTGCCGTTCTCTGATGGGTGGTTATGTCGCCTGGCGCGCTGGAT
CCTTGGAGGATGGAAGCGACAGTTTGGCAGAGGAGGTTGCGCCGCAGTCT
CACTGGCCTGAAATGCGTGCCCTCATCCTGGTTGTCAGTGCCGCAAAGAA
GGATGTCCCCAGCACTGAGGGTATGCAGACGACCGTCGCTACCTCGAACC
TTTTTGCTACCCGCGCGAGCACTGTTGTTCCGGAGCGGATGGCTGCCATC
GAGACCGCCATCCAGAACCGCGATTTCCCCGCCTTCGCAGAGATCACGAT
GCGCGACTCCAACAGCTTCCACGCCACTTGCTTGGACTCCTGGCCTCCGA
TCTTCTACATGAACGACATCTCTCGCGCTGCCGTCAGACTCGTCCATGAT
ATTAACCGCGCAATCGGCCGGACCGTCTGCGCGTACACCTACGATGCGGG
CCCGAACGCTGTCATCTACTACCTTGAGAAGGATACCGAGCTTGTTGCCG
GTACCGTCAAGGCTATCCTTGGTGAAAAGACGGAGGGCTGGGAAGGTCCC
TTCTACACGCCTCTGAAGGACGTTACCACCCCCGGCGTGTCCCTGGATGA
GATCGACCCCCGCACCGTGGAGTCGCTCAAGGATGGCGTGAGCCGTGTGA
TCTTGACCGGTGTTGGCGAGGGCCCCATCTCAGTGGACCAGCATCTTGTC
AGTGAGAAGGGCGATATTCTTTCTGCCTAG
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Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Cellular Component
TermDefinition
GO:0005829cytosol
Vocabulary: Biological Process
TermDefinition
GO:0008299isoprenoid biosynthetic process
GO:0019287isopentenyl diphosphate biosynthetic process, mevalonate pathway
Vocabulary: Molecular Function
TermDefinition
GO:0005524ATP binding
GO:0016831carboxy-lyase activity
GO:0004163diphosphomevalonate decarboxylase activity
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
ATCC64974_77580ATCC64974_77580Aspergillus niger N402gene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ATCC64974_77580-T1.exon1ATCC64974_77580-T1.exon1Aspergillus niger N402exon
ATCC64974_77580-T1.exon2ATCC64974_77580-T1.exon2Aspergillus niger N402exon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ATCC64974_77580-T1.cdsATCC64974_77580-T1.cdsAspergillus niger N402CDS


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
ATCC64974_77580-T1ATCC64974_77580-T1-proteinAspergillus niger N402polypeptide


Properties
Property NameValue
NoteBUSCO:EOG09263BG5
DBxrefInterPro:IPR020568
DBxrefInterPro:IPR041431
DBxrefInterPro:IPR006204
DBxrefInterPro:IPR005935
DBxrefInterPro:IPR014721
DBxrefInterPro:IPR029765
DBxrefInterPro:IPR036554
DBxrefPFAM:PF18376
DBxrefPFAM:PF00288
Producthypothetical protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger N402 whole genome analysis2021-11-01
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
OGUI01000013.1supercontigOGUI01000013.1:1310523..1311803 +
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