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Sequences
The following sequences are available for this feature:
mRNA from alignment at OGUI01000002.1:124503..126633+ Legend: exonpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >ATCC64974_7760-T1 ID=ATCC64974_7760-T1|Name=ATCC64974_7760-T1|organism=Aspergillus niger N402|type=mRNA|length=2131bp|location=Sequence derived from alignment at OGUI01000002.1:124503..126633+ (Aspergillus niger N402)
ATGACTTCTCAAGTATGCGATCAATTCCCCCTCCCCTCTCTTCCCGCCCC
TCATCTGTACCACTGCTAATGATCCGAGTAACAGTACGCGGCGGAGCTAT
GTGCGCTCTTGGTCGAGGATAATTTCGGGGAGCTTTTTGCGGTATGCTCG
CTTTTGCTCACTTGGTAACCCGCTGCATTCATGAAGAACCATATAGTCGG
TGTCAATTTGCGGGCCACATCGAGCAACAGGCTGACCGTTATCCGTCTTC
GCCAGCGTATCTTCTCAACCCTCCAGCGCTATGACCGGCTCTCATTACCT
CGTTTAAAATTCTACTCGCGCCTCTCCGATCGTCAACTTCGTCATGGTCT
ATCTGCCATGATTCAACACCACCTGGTGTACCATTACACATCCTACGACG
ATGGCGTTACCTATTACGAACCAAACCTGCAGGCTGCGTACTATCTTGTT
CGCTCCGGCAAGATCCTGGAGTTCATCGAAGAACGGCTTGGGAAGTATGC
GGCTACCCTTATGGAGACCATTATGTTTCTCGGACACGCACAAGTCGGCT
ACCTCGAGACCCTCCCTGAACTGCAACCCGCACCACCTAAAGCGAATGGC
GTGAAACAGGAAGCCGAAGGTGGAGAGTCCGAAGAACAAATGAATGGCGA
TGATGTGCACACCTCCGACCAGCCGGCGCTTCTACATCCTACTCTGAAAG
CACTGGCTTCCCACGGTTATATCTTTCGTGTGCGCGATGCGCAATTCCAA
AGCTACGCTGATAACGCCCTGGATGCGGAACGTGCCATCAAGTCGCGACC
TGATGTCAAGCAGCTAAAGGGTAAGAAGCTGGACGAAACAGTCCTGGAAG
GGACTGTTACTCTTTTGAAAGAAAGACTTGATGGGGATCTTACCCGCGGA
CTCATGCATAACGGGTTACCCCGGGGTGCGAAGAGAAGGCATGGTACCGG
GTCTGCAGATGCTACAAACAAAAAAGCACGAATGGACTACGTCGATGCTG
ATGAGGATGAGGATGAGGAGGAGAACGAATGGTCGGATGACGAGATGGGT
GGGGATACCACTCCCATGGAGGTGAGACTCTGCGTTATTCTCCTTTATAT
GTCTGTTTGACTAATGGGTTTGTTCAATCTAGTTGGCAATTGTTGTCCGC
GTGAACTATGAGAAACTCGACGTTGCTCTTCGGAATCGACGGTTTTTGGA
TCTTGCGGAGATGAACTCATCGCCAGTTACCGCACAGGTCTACGAGGGCC
TCCTACGACGCATAGAATACCAAACCAAACAATGCCGAGATAGTGCTGAG
ATACCCCGCGAAGGAGAGGAAGGCGAGCAATACTCCGTCCCCATCGCTCT
TAGTGCGGTGACAGAAGAAGTCGACCCGCAGTTGGACCTTGCAGGCTCCA
TAGGTCCCATGGAGATATCACAGGCCATCAACAAACGTGGGAAACGGCCT
CTGGAGGACAGTGTCAATGGAACCGACCGTGAAGGATCAGAAGCCCCCAG
CCGCACCTACGAGGTAGACCAACACCTTTCTCTGCTCTCGCAGCCCCCCT
ACAACCTCACATCCAAGCGCGTACTTTCCGGACTCATTACCTGGACCGTC
GAATTCCGACACCTAGCGCGCAAGCTCCGCCACCTAGAACTGGAACGAAT
GATTGAAGCCCGCTATGGCGACGTCGCTTTACGAGTGATCCGCGTACTCC
ACGCCAAGGGCAAGCTCGACGAGAAGCGCCTACAGGAAATCAGTCTCCTC
CCCTTCAAAGACCTGCGTCAAGTCCTCGCTAGCATGCAGTCCGGTGGGTT
TGTGGATCTGCAAGAAGTCCCCCGAGACGCACAGCGACAGCCCTCTCGTA
CGATCTACCTCTGGTACTATGATCCGGACCGCATCCGGAGCAGCATTCTG
GAGGACACGTACAAGGCTATGTCTAGGTGTATGCAACGCCTGCGGTTTGA
GCGGAACCGACTCAAGGAGTTCCTGGAGAAGACGGAGCGGAGTGATGTCA
AGGGCAATGAGGAGCGCTATCTGTCTCAGGCTGAGTTGACCCTGTTGGAG
CAGTGGAAGGCTAAAGAGGCCTTGTTGCTTGGGGAGGTGGCTCGGTTGGA
TGAGATGGTTGCGGTCATGCGAGACTACTGA back to topCoding sequence (CDS) from alignment at OGUI01000002.1:124503..126633+ >ATCC64974_7760-T1 ID=ATCC64974_7760-T1|Name=ATCC64974_7760-T1|organism=Aspergillus niger N402|type=CDS|length=7536bp|location=Sequence derived from alignment at OGUI01000002.1:124503..126633+ (Aspergillus niger N402)
ATGACTTCTCAATACGCGGCGGAGCTATGTGCGCTCTTGGTCGAGGATAA
TTTCGGGGAGCTTTTTGCGCGTATCTTCTCAACCCTCCAGCGCTATGACC
GGCTCTCATTACCTCGTTTAAAATTCTACTCGCGCCTCTCCGATCGTCAA
CTTCGTCATGGTCTATCTGCCATGATTCAACACCACCTGGTGTACCATTA
CACATCCTACGACGATGGCGTTACCTATTACGAACCAAACCTGCAGGCTG
CGTACTATCTTGTTCGCTCCGGCAAGATCCTGGAGTTCATCGAAGAACGG
CTTGGGAAGTATGCGGCTACCCTTATGGAGACCATTATGTTTCTCGGACA
CGCACAAGTCGGCTACCTCGAGACCCTCCCTGAACTGCAACCCGCACCAC
CTAAAGCGAATGGCGTGAAACAGGAAGCCGAAGGTGGAGAGTCCGAAGAA
CAAATGAATGGCGATGATGTGCACACCTCCGACCAGCCGGCGCTTCTACA
TCCTACTCTGAAAGCACTGGCTTCCCACGGTTATATCTTTCGTGTGCGCG
ATGCGCAATTCCAAAGCTACGCTGATAACGCCCTGGATGCGGAACGTGCC
ATCAAGTCGCGACCTGATGTCAAGCAGCTAAAGGGTAAGAAGCTGGACGA
AACAGTCCTGGAAGGGACTGTTACTCTTTTGAAAGAAAGACTTGATGGGG
ATCTTACCCGCGGACTCATGCATAACGGGTTACCCCGGGGTGCGAAGAGA
AGGCATGGTACCGGGTCTGCAGATGCTACAAACAAAAAAGCACGAATGGA
CTACGTCGATGCTGATGAGGATGAGGATGAGGAGGAGAACGAATGGTCGG
ATGACGAGATGGGTGGGGATACCACTCCCATGGAGTTGGCAATTGTTGTC
CGCGTGAACTATGAGAAACTCGACGTTGCTCTTCGGAATCGACGGTTTTT
GGATCTTGCGGAGATGAACTCATCGCCAGTTACCGCACAGGTCTACGAGG
GCCTCCTACGACGCATAGAATACCAAACCAAACAATGCCGAGATAGTGCT
GAGATACCCCGCGAAGGAGAGGAAGGCGAGCAATACTCCGTCCCCATCGC
TCTTAGTGCGGTGACAGAAGAAGTCGACCCGCAGTTGGACCTTGCAGGCT
CCATAGGTCCCATGGAGATATCACAGGCCATCAACAAACGTGGGAAACGG
CCTCTGGAGGACAGTGTCAATGGAACCGACCGTGAAGGATCAGAAGCCCC
CAGCCGCACCTACGAGGTAGACCAACACCTTTCTCTGCTCTCGCAGCCCC
CCTACAACCTCACATCCAAGCGCGTACTTTCCGGACTCATTACCTGGACC
GTCGAATTCCGACACCTAGCGCGCAAGCTCCGCCACCTAGAACTGGAACG
AATGATTGAAGCCCGCTATGGCGACGTCGCTTTACGAGTGATCCGCGTAC
TCCACGCCAAGGGCAAGCTCGACGAGAAGCGCCTACAGGAAATCAGTCTC
CTCCCCTTCAAAGACCTGCGTCAAGTCCTCGCTAGCATGCAGTCCGGTGG
GTTTGTGGATCTGCAAGAAGTCCCCCGAGACGCACAGCGACAGCCCTCTC
GTACGATCTACCTCTGGTACTATGATCCGGACCGCATCCGGAGCAGCATT
CTGGAGGACACGTACAAGGCTATGTCTAGGTGTATGCAACGCCTGCGGTT
TGAGCGGAACCGACTCAAGGAGTTCCTGGAGAAGACGGAGCGGAGTGATG
TCAAGGGCAATGAGGAGCGCTATCTGTCTCAGGCTGAGTTGACCCTGTTG
GAGCAGTGGAAGGCTAAAGAGGCCTTGTTGCTTGGGGAGGTGGCTCGGTT
GGATGAGATGGTTGCGGTCATGCGAGACTACTGAATGACTTCTCAATACG
CGGCGGAGCTATGTGCGCTCTTGGTCGAGGATAATTTCGGGGAGCTTTTT
GCGCGTATCTTCTCAACCCTCCAGCGCTATGACCGGCTCTCATTACCTCG
TTTAAAATTCTACTCGCGCCTCTCCGATCGTCAACTTCGTCATGGTCTAT
CTGCCATGATTCAACACCACCTGGTGTACCATTACACATCCTACGACGAT
GGCGTTACCTATTACGAACCAAACCTGCAGGCTGCGTACTATCTTGTTCG
CTCCGGCAAGATCCTGGAGTTCATCGAAGAACGGCTTGGGAAGTATGCGG
CTACCCTTATGGAGACCATTATGTTTCTCGGACACGCACAAGTCGGCTAC
CTCGAGACCCTCCCTGAACTGCAACCCGCACCACCTAAAGCGAATGGCGT
GAAACAGGAAGCCGAAGGTGGAGAGTCCGAAGAACAAATGAATGGCGATG
ATGTGCACACCTCCGACCAGCCGGCGCTTCTACATCCTACTCTGAAAGCA
CTGGCTTCCCACGGTTATATCTTTCGTGTGCGCGATGCGCAATTCCAAAG
CTACGCTGATAACGCCCTGGATGCGGAACGTGCCATCAAGTCGCGACCTG
ATGTCAAGCAGCTAAAGGGTAAGAAGCTGGACGAAACAGTCCTGGAAGGG
ACTGTTACTCTTTTGAAAGAAAGACTTGATGGGGATCTTACCCGCGGACT
CATGCATAACGGGTTACCCCGGGGTGCGAAGAGAAGGCATGGTACCGGGT
CTGCAGATGCTACAAACAAAAAAGCACGAATGGACTACGTCGATGCTGAT
GAGGATGAGGATGAGGAGGAGAACGAATGGTCGGATGACGAGATGGGTGG
GGATACCACTCCCATGGAGTTGGCAATTGTTGTCCGCGTGAACTATGAGA
AACTCGACGTTGCTCTTCGGAATCGACGGTTTTTGGATCTTGCGGAGATG
AACTCATCGCCAGTTACCGCACAGGTCTACGAGGGCCTCCTACGACGCAT
AGAATACCAAACCAAACAATGCCGAGATAGTGCTGAGATACCCCGCGAAG
GAGAGGAAGGCGAGCAATACTCCGTCCCCATCGCTCTTAGTGCGGTGACA
GAAGAAGTCGACCCGCAGTTGGACCTTGCAGGCTCCATAGGTCCCATGGA
GATATCACAGGCCATCAACAAACGTGGGAAACGGCCTCTGGAGGACAGTG
TCAATGGAACCGACCGTGAAGGATCAGAAGCCCCCAGCCGCACCTACGAG
GTAGACCAACACCTTTCTCTGCTCTCGCAGCCCCCCTACAACCTCACATC
CAAGCGCGTACTTTCCGGACTCATTACCTGGACCGTCGAATTCCGACACC
TAGCGCGCAAGCTCCGCCACCTAGAACTGGAACGAATGATTGAAGCCCGC
TATGGCGACGTCGCTTTACGAGTGATCCGCGTACTCCACGCCAAGGGCAA
GCTCGACGAGAAGCGCCTACAGGAAATCAGTCTCCTCCCCTTCAAAGACC
TGCGTCAAGTCCTCGCTAGCATGCAGTCCGGTGGGTTTGTGGATCTGCAA
GAAGTCCCCCGAGACGCACAGCGACAGCCCTCTCGTACGATCTACCTCTG
GTACTATGATCCGGACCGCATCCGGAGCAGCATTCTGGAGGACACGTACA
AGGCTATGTCTAGGTGTATGCAACGCCTGCGGTTTGAGCGGAACCGACTC
AAGGAGTTCCTGGAGAAGACGGAGCGGAGTGATGTCAAGGGCAATGAGGA
GCGCTATCTGTCTCAGGCTGAGTTGACCCTGTTGGAGCAGTGGAAGGCTA
AAGAGGCCTTGTTGCTTGGGGAGGTGGCTCGGTTGGATGAGATGGTTGCG
GTCATGCGAGACTACTGAATGACTTCTCAATACGCGGCGGAGCTATGTGC
GCTCTTGGTCGAGGATAATTTCGGGGAGCTTTTTGCGCGTATCTTCTCAA
CCCTCCAGCGCTATGACCGGCTCTCATTACCTCGTTTAAAATTCTACTCG
CGCCTCTCCGATCGTCAACTTCGTCATGGTCTATCTGCCATGATTCAACA
CCACCTGGTGTACCATTACACATCCTACGACGATGGCGTTACCTATTACG
AACCAAACCTGCAGGCTGCGTACTATCTTGTTCGCTCCGGCAAGATCCTG
GAGTTCATCGAAGAACGGCTTGGGAAGTATGCGGCTACCCTTATGGAGAC
CATTATGTTTCTCGGACACGCACAAGTCGGCTACCTCGAGACCCTCCCTG
AACTGCAACCCGCACCACCTAAAGCGAATGGCGTGAAACAGGAAGCCGAA
GGTGGAGAGTCCGAAGAACAAATGAATGGCGATGATGTGCACACCTCCGA
CCAGCCGGCGCTTCTACATCCTACTCTGAAAGCACTGGCTTCCCACGGTT
ATATCTTTCGTGTGCGCGATGCGCAATTCCAAAGCTACGCTGATAACGCC
CTGGATGCGGAACGTGCCATCAAGTCGCGACCTGATGTCAAGCAGCTAAA
GGGTAAGAAGCTGGACGAAACAGTCCTGGAAGGGACTGTTACTCTTTTGA
AAGAAAGACTTGATGGGGATCTTACCCGCGGACTCATGCATAACGGGTTA
CCCCGGGGTGCGAAGAGAAGGCATGGTACCGGGTCTGCAGATGCTACAAA
CAAAAAAGCACGAATGGACTACGTCGATGCTGATGAGGATGAGGATGAGG
AGGAGAACGAATGGTCGGATGACGAGATGGGTGGGGATACCACTCCCATG
GAGTTGGCAATTGTTGTCCGCGTGAACTATGAGAAACTCGACGTTGCTCT
TCGGAATCGACGGTTTTTGGATCTTGCGGAGATGAACTCATCGCCAGTTA
CCGCACAGGTCTACGAGGGCCTCCTACGACGCATAGAATACCAAACCAAA
CAATGCCGAGATAGTGCTGAGATACCCCGCGAAGGAGAGGAAGGCGAGCA
ATACTCCGTCCCCATCGCTCTTAGTGCGGTGACAGAAGAAGTCGACCCGC
AGTTGGACCTTGCAGGCTCCATAGGTCCCATGGAGATATCACAGGCCATC
AACAAACGTGGGAAACGGCCTCTGGAGGACAGTGTCAATGGAACCGACCG
TGAAGGATCAGAAGCCCCCAGCCGCACCTACGAGGTAGACCAACACCTTT
CTCTGCTCTCGCAGCCCCCCTACAACCTCACATCCAAGCGCGTACTTTCC
GGACTCATTACCTGGACCGTCGAATTCCGACACCTAGCGCGCAAGCTCCG
CCACCTAGAACTGGAACGAATGATTGAAGCCCGCTATGGCGACGTCGCTT
TACGAGTGATCCGCGTACTCCACGCCAAGGGCAAGCTCGACGAGAAGCGC
CTACAGGAAATCAGTCTCCTCCCCTTCAAAGACCTGCGTCAAGTCCTCGC
TAGCATGCAGTCCGGTGGGTTTGTGGATCTGCAAGAAGTCCCCCGAGACG
CACAGCGACAGCCCTCTCGTACGATCTACCTCTGGTACTATGATCCGGAC
CGCATCCGGAGCAGCATTCTGGAGGACACGTACAAGGCTATGTCTAGGTG
TATGCAACGCCTGCGGTTTGAGCGGAACCGACTCAAGGAGTTCCTGGAGA
AGACGGAGCGGAGTGATGTCAAGGGCAATGAGGAGCGCTATCTGTCTCAG
GCTGAGTTGACCCTGTTGGAGCAGTGGAAGGCTAAAGAGGCCTTGTTGCT
TGGGGAGGTGGCTCGGTTGGATGAGATGGTTGCGGTCATGCGAGACTACT
GAATGACTTCTCAATACGCGGCGGAGCTATGTGCGCTCTTGGTCGAGGAT
AATTTCGGGGAGCTTTTTGCGCGTATCTTCTCAACCCTCCAGCGCTATGA
CCGGCTCTCATTACCTCGTTTAAAATTCTACTCGCGCCTCTCCGATCGTC
AACTTCGTCATGGTCTATCTGCCATGATTCAACACCACCTGGTGTACCAT
TACACATCCTACGACGATGGCGTTACCTATTACGAACCAAACCTGCAGGC
TGCGTACTATCTTGTTCGCTCCGGCAAGATCCTGGAGTTCATCGAAGAAC
GGCTTGGGAAGTATGCGGCTACCCTTATGGAGACCATTATGTTTCTCGGA
CACGCACAAGTCGGCTACCTCGAGACCCTCCCTGAACTGCAACCCGCACC
ACCTAAAGCGAATGGCGTGAAACAGGAAGCCGAAGGTGGAGAGTCCGAAG
AACAAATGAATGGCGATGATGTGCACACCTCCGACCAGCCGGCGCTTCTA
CATCCTACTCTGAAAGCACTGGCTTCCCACGGTTATATCTTTCGTGTGCG
CGATGCGCAATTCCAAAGCTACGCTGATAACGCCCTGGATGCGGAACGTG
CCATCAAGTCGCGACCTGATGTCAAGCAGCTAAAGGGTAAGAAGCTGGAC
GAAACAGTCCTGGAAGGGACTGTTACTCTTTTGAAAGAAAGACTTGATGG
GGATCTTACCCGCGGACTCATGCATAACGGGTTACCCCGGGGTGCGAAGA
GAAGGCATGGTACCGGGTCTGCAGATGCTACAAACAAAAAAGCACGAATG
GACTACGTCGATGCTGATGAGGATGAGGATGAGGAGGAGAACGAATGGTC
GGATGACGAGATGGGTGGGGATACCACTCCCATGGAGTTGGCAATTGTTG
TCCGCGTGAACTATGAGAAACTCGACGTTGCTCTTCGGAATCGACGGTTT
TTGGATCTTGCGGAGATGAACTCATCGCCAGTTACCGCACAGGTCTACGA
GGGCCTCCTACGACGCATAGAATACCAAACCAAACAATGCCGAGATAGTG
CTGAGATACCCCGCGAAGGAGAGGAAGGCGAGCAATACTCCGTCCCCATC
GCTCTTAGTGCGGTGACAGAAGAAGTCGACCCGCAGTTGGACCTTGCAGG
CTCCATAGGTCCCATGGAGATATCACAGGCCATCAACAAACGTGGGAAAC
GGCCTCTGGAGGACAGTGTCAATGGAACCGACCGTGAAGGATCAGAAGCC
CCCAGCCGCACCTACGAGGTAGACCAACACCTTTCTCTGCTCTCGCAGCC
CCCCTACAACCTCACATCCAAGCGCGTACTTTCCGGACTCATTACCTGGA
CCGTCGAATTCCGACACCTAGCGCGCAAGCTCCGCCACCTAGAACTGGAA
CGAATGATTGAAGCCCGCTATGGCGACGTCGCTTTACGAGTGATCCGCGT
ACTCCACGCCAAGGGCAAGCTCGACGAGAAGCGCCTACAGGAAATCAGTC
TCCTCCCCTTCAAAGACCTGCGTCAAGTCCTCGCTAGCATGCAGTCCGGT
GGGTTTGTGGATCTGCAAGAAGTCCCCCGAGACGCACAGCGACAGCCCTC
TCGTACGATCTACCTCTGGTACTATGATCCGGACCGCATCCGGAGCAGCA
TTCTGGAGGACACGTACAAGGCTATGTCTAGGTGTATGCAACGCCTGCGG
TTTGAGCGGAACCGACTCAAGGAGTTCCTGGAGAAGACGGAGCGGAGTGA
TGTCAAGGGCAATGAGGAGCGCTATCTGTCTCAGGCTGAGTTGACCCTGT
TGGAGCAGTGGAAGGCTAAAGAGGCCTTGTTGCTTGGGGAGGTGGCTCGG
TTGGATGAGATGGTTGCGGTCATGCGAGACTACTGA back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Molecular Function
| Term | Definition |
|---|
| GO:0003899 | DNA-directed 5'-3' RNA polymerase activity |
| GO:0003677 | DNA binding |
Vocabulary: Biological Process
| Term | Definition |
|---|
| GO:0006351 | transcription, DNA-templated |
Relationships
This mRNA is a part of the following gene feature(s):
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| ATCC64974_7760-T1 | ATCC64974_7760-T1-protein | Aspergillus niger N402 | polypeptide |
Properties
| Property Name | Value |
|---|
| Note | BUSCO:EOG092610QT |
| DBxref | InterPro:IPR036390 |
| DBxref | InterPro:IPR008806 |
| DBxref | InterPro:IPR013197 |
| DBxref | InterPro:IPR036388 |
| DBxref | PFAM:PF05645 |
| DBxref | PFAM:PF08221 |
| Product | RNA polymerase III subunit C82 |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| OGUI01000002.1 | supercontig | OGUI01000002.1:124503..126633 + |
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