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ATCC64974_77620-T1, ATCC64974_77620-T1 (mRNA) Aspergillus niger N402

Overview
NameATCC64974_77620-T1
Unique NameATCC64974_77620-T1
TypemRNA
OrganismAspergillus niger N402
Sequences
The following sequences are available for this feature:

mRNA from alignment at OGUI01000013.1:1323682..1324704+

Legend: exonpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>ATCC64974_77620-T1 ID=ATCC64974_77620-T1|Name=ATCC64974_77620-T1|organism=Aspergillus niger N402|type=mRNA|length=1023bp|location=Sequence derived from alignment at OGUI01000013.1:1323682..1324704+ (Aspergillus niger N402)
ATGAACAGCTTGGTGGCTACACCACCTGTGCCTCCTCATCACTTTTACGA
ATACTCCCGTCCTTCTCCCTCCCGTCCAAGTAAGCATCTCCCTGTCTTTT
CCCAGGGCATTCGATGATAATTCCCTTGCTATGTGACCTTTGATGACTGA
CTGATATCAGTGTCTACCCCCATTCACACTCCCAACAACCGCAAACGGAA
AGCCGACGATGAGAATGATCACGATGGTCGAATGTCAGCATCACCTACCA
ACTCTCCCGCCTTGACCCCGAGAACCCTTCCAGTCAACCGAAACATCAAG
CGTGCTCGTCCGAATGTTAGCGGACGGCCTCTCGCTCTCCCCCGACTGCT
GGAGACCTTGGACACAGACGCTCTTCGGGGCATCCTTCGGACCGTGTGTG
AGCGTCATCCAGGTTTGGTTGATGAAGTGGTGCACACAGCACCTCGACCC
AGCGTGGCATCTGCCCTTCAAGTCCTTCGACATTACGAATCTGCCCTTCA
GTCGTCGTTCCCGCTCGGTGGCAACTCCGAATCAGATTATGCATACAATC
GTGTCCGACAACCGCTGGGGAATCTTCTAGATGCTCTGAGCGACTTCACT
CCACATTTCCTACCCCCTCACGAGACGCAGTCGTCTGTTTCCTTGAGTTA
CCTGGATGGTGCGACCGACATAATTCACGCACTGCCCCGTTGGAGTACAC
CACAGAACAACCTCGAGCGGGATTCTGCATACGATGAGATCTGCAAGGCT
TGGATTTTGGTGATTCGGGAAGCAGCCAAGCGTGGTGGTGGAATTCAGTT
ACAATACGGTGGTTGGGATCAGAAGTTGGCGAAGCACAATCACAACTCGG
GCGGTAAACTGCAGGCAGCCGTCAACGAGCTTGGTTCCAGTTTGGGATGG
ATGCACAGACCGGATGCCCAAGGTTATGGAAGCCCAGGCGGCAATGACCT
TGGGTCCATCCGGGAGCAACTCCTGTCGGGCACATACGGGCTCGGTACCC
CCGTCAAGGTTGGGCCATGGTGA
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Coding sequence (CDS) from alignment at OGUI01000013.1:1323682..1324704+

>ATCC64974_77620-T1 ID=ATCC64974_77620-T1|Name=ATCC64974_77620-T1|organism=Aspergillus niger N402|type=CDS|length=1884bp|location=Sequence derived from alignment at OGUI01000013.1:1323682..1324704+ (Aspergillus niger N402)
ATGAACAGCTTGGTGGCTACACCACCTGTGCCTCCTCATCACTTTTACGA
ATACTCCCGTCCTTCTCCCTCCCGTCCAATGTCTACCCCCATTCACACTC
CCAACAACCGCAAACGGAAAGCCGACGATGAGAATGATCACGATGGTCGA
ATGTCAGCATCACCTACCAACTCTCCCGCCTTGACCCCGAGAACCCTTCC
AGTCAACCGAAACATCAAGCGTGCTCGTCCGAATGTTAGCGGACGGCCTC
TCGCTCTCCCCCGACTGCTGGAGACCTTGGACACAGACGCTCTTCGGGGC
ATCCTTCGGACCGTGTGTGAGCGTCATCCAGGTTTGGTTGATGAAGTGGT
GCACACAGCACCTCGACCCAGCGTGGCATCTGCCCTTCAAGTCCTTCGAC
ATTACGAATCTGCCCTTCAGTCGTCGTTCCCGCTCGGTGGCAACTCCGAA
TCAGATTATGCATACAATCGTGTCCGACAACCGCTGGGGAATCTTCTAGA
TGCTCTGAGCGACTTCACTCCACATTTCCTACCCCCTCACGAGACGCAGT
CGTCTGTTTCCTTGAGTTACCTGGATGGTGCGACCGACATAATTCACGCA
CTGCCCCGTTGGAGTACACCACAGAACAACCTCGAGCGGGATTCTGCATA
CGATGAGATCTGCAAGGCTTGGATTTTGGTGATTCGGGAAGCAGCCAAGC
GTGGTGGTGGAATTCAGTTACAATACGGTGGTTGGGATCAGAAGTTGGCG
AAGCACAATCACAACTCGGGCGGTAAACTGCAGGCAGCCGTCAACGAGCT
TGGTTCCAGTTTGGGATGGATGCACAGACCGGATGCCCAAGGTTATGGAA
GCCCAGGCGGCAATGACCTTGGGTCCATCCGGGAGCAACTCCTGTCGGGC
ACATACGGGCTCGGTACCCCCGTCAAGGTTGGGCCATGGTGAATGAACAG
CTTGGTGGCTACACCACCTGTGCCTCCTCATCACTTTTACGAATACTCCC
GTCCTTCTCCCTCCCGTCCAATGTCTACCCCCATTCACACTCCCAACAAC
CGCAAACGGAAAGCCGACGATGAGAATGATCACGATGGTCGAATGTCAGC
ATCACCTACCAACTCTCCCGCCTTGACCCCGAGAACCCTTCCAGTCAACC
GAAACATCAAGCGTGCTCGTCCGAATGTTAGCGGACGGCCTCTCGCTCTC
CCCCGACTGCTGGAGACCTTGGACACAGACGCTCTTCGGGGCATCCTTCG
GACCGTGTGTGAGCGTCATCCAGGTTTGGTTGATGAAGTGGTGCACACAG
CACCTCGACCCAGCGTGGCATCTGCCCTTCAAGTCCTTCGACATTACGAA
TCTGCCCTTCAGTCGTCGTTCCCGCTCGGTGGCAACTCCGAATCAGATTA
TGCATACAATCGTGTCCGACAACCGCTGGGGAATCTTCTAGATGCTCTGA
GCGACTTCACTCCACATTTCCTACCCCCTCACGAGACGCAGTCGTCTGTT
TCCTTGAGTTACCTGGATGGTGCGACCGACATAATTCACGCACTGCCCCG
TTGGAGTACACCACAGAACAACCTCGAGCGGGATTCTGCATACGATGAGA
TCTGCAAGGCTTGGATTTTGGTGATTCGGGAAGCAGCCAAGCGTGGTGGT
GGAATTCAGTTACAATACGGTGGTTGGGATCAGAAGTTGGCGAAGCACAA
TCACAACTCGGGCGGTAAACTGCAGGCAGCCGTCAACGAGCTTGGTTCCA
GTTTGGGATGGATGCACAGACCGGATGCCCAAGGTTATGGAAGCCCAGGC
GGCAATGACCTTGGGTCCATCCGGGAGCAACTCCTGTCGGGCACATACGG
GCTCGGTACCCCCGTCAAGGTTGGGCCATGGTGA
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Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Cellular Component
TermDefinition
GO:0005634nucleus
Vocabulary: Biological Process
TermDefinition
GO:0071630nuclear protein quality control by the ubiquitin-proteasome system
GO:0031144proteasome localization
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
STS1ATCC64974_77620Aspergillus niger N402gene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ATCC64974_77620-T1.exon1ATCC64974_77620-T1.exon1Aspergillus niger N402exon
ATCC64974_77620-T1.exon2ATCC64974_77620-T1.exon2Aspergillus niger N402exon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ATCC64974_77620-T1.cdsATCC64974_77620-T1.cdsAspergillus niger N402CDS


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
ATCC64974_77620-T1ATCC64974_77620-T1-proteinAspergillus niger N402polypeptide


Properties
Property NameValue
DBxrefInterPro:IPR013868
DBxrefInterPro:IPR038422
DBxrefPFAM:PF08559
ProductTethering factor for nuclear proteasome sts1
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger N402 whole genome analysis2021-11-01
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
OGUI01000013.1supercontigOGUI01000013.1:1323682..1324704 +
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