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ATCC64974_77670-T1, ATCC64974_77670-T1 (mRNA) Aspergillus niger N402

Overview
NameATCC64974_77670-T1
Unique NameATCC64974_77670-T1
TypemRNA
OrganismAspergillus niger N402
Sequences
The following sequences are available for this feature:

mRNA from alignment at OGUI01000013.1:1336787..1338335-

Legend: polypeptideCDSexon
Hold the cursor over a type above to highlight its positions in the sequence below.
>ATCC64974_77670-T1 ID=ATCC64974_77670-T1|Name=ATCC64974_77670-T1|organism=Aspergillus niger N402|type=mRNA|length=1549bp|location=Sequence derived from alignment at OGUI01000013.1:1336787..1338335- (Aspergillus niger N402)
ATGGCGGTAGGTCCACCTGCGTCTACCTTTTGAACATCTTCGTCTTTTGG
AATGCATCTGATAATATTCTTAGTGACAGTAGTGATTAGTCCTTTGCTTG
CTTTGATGGTCAGCCTGAGAAACAATCACTCTCGAGCAGTACTAATATCT
CGTGCAGACCGACCAAGTAAAGGCACTTCAAGCTTTAGGGATTGCGGTAG
CAACAATCAATTCCACCACTCCGATTGCTGAGAGGCGTATAATCCTGGAC
GACCTCCTATCGGGTCATCCAAAGACCCGGCTTCTCTACGTGACACCAGA
ACTCTGTCAAACAGAAGGCTTTCGACGCAATCTACAGACTATTCACCGTC
AGGGTGAGCTAATTCGTGTTGCCATCGACGAAGCGCATTGCATCAGTGAA
TGGGGTCATGACTTTCGGCCGGCGTACAAAGAACTGGGCTGGTTCAAGCA
AGTTTTGACAAATCCGCCGGTTCCAATTAGTGCGCTTACGGCGACTGCAA
CGCCTCGTGTTCGGGAAGACATCATCAAACTTCTTGGATTAGATACTTCC
AAGTTGAAGATCTTCAACACTCCTTCTGCGCGTCCGAACATACATTACGA
GATAAGGTACCTCGACGATTTTGCAAGCGACCCCACAGAGCCAGAAAACT
TTCAGATTCACAACCTCGTCTCATGGCTCCAGTCTGTCCAGGCCCGCAGA
GAGGCCGTCACTGGCACTGCACCCGCCACGCTTCCCCCGATATCCGGGAT
TATCTATGTGCCTCTCAGGACCGTATCTGACAAACTCGCCCCTGCTCTCT
CAGCAAGCTGGCCTGGCCGTATCCACGCTGTGGCTTACCACGCTGGCCTA
TCCTCCGAAGACCGTACGCGCATTCAGTCCGAATGGACATCGTCTAAGAC
ATTCCCTCGGCATGCAAACAATAGAAACGAATCACCGGAACACCCGGCAT
TTTACATTATAGTCGCTACTACTGCATTCGGCATGGGCATCGATAGCCCA
CACGTCCGCTTCGTTGTTCATTGGAGTCCGCCACGGAGCTTCGAAGGCTT
CGTTCAAGAATCCGGTCGTGCAGGTCGCGACGGTCATGCTGCCGCATCCA
TTGTCTACTACAACACACAAGAGCGAGACAGAATTCTTGACCGTCTGCAA
CGAGACATTGAGAACGCTCGCAATCGCACTGGTGCGCATATGAGCAACCA
GAACAGCAAGGCACAAACCACCGTTCAAAATCAGCTTGCCCGATTAGCGA
GCTTTCAGAAAGTGATCAGCTACTGTGAGAATACCACACGATGCAGGCAT
GACCTGATCAAGGATTTCTTTGGCGATCTCGAACTTGAGAAGATGGGCTC
CCAAGTCCCTACGTCTGGGATAAAAACTAATGGTTCGACTGCATCACCAT
GTGACTTTGCTTGTGACTTCTGCAAAGAAGGTTCGCACGCTCTTGCCCAG
CGAAAGGCGAAAATGGCTCCCGAAAGCCACTCGGACGACTTCGTCGACAT
GGACGTCCCGTGGTATATGCAGAGGATGTTTCCAGGGGTGTTTTCCTGA
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Coding sequence (CDS) from alignment at OGUI01000013.1:1336787..1338335-

>ATCC64974_77670-T1 ID=ATCC64974_77670-T1|Name=ATCC64974_77670-T1|organism=Aspergillus niger N402|type=CDS|length=2796bp|location=Sequence derived from alignment at OGUI01000013.1:1336787..1338335- (Aspergillus niger N402)
ACCGACCAAGTAAAGGCACTTCAAGCTTTAGGGATTGCGGTAGCAACAAT
CAATTCCACCACTCCGATTGCTGAGAGGCGTATAATCCTGGACGACCTCC
TATCGGGTCATCCAAAGACCCGGCTTCTCTACGTGACACCAGAACTCTGT
CAAACAGAAGGCTTTCGACGCAATCTACAGACTATTCACCGTCAGGGTGA
GCTAATTCGTGTTGCCATCGACGAAGCGCATTGCATCAGTGAATGGGGTC
ATGACTTTCGGCCGGCGTACAAAGAACTGGGCTGGTTCAAGCAAGTTTTG
ACAAATCCGCCGGTTCCAATTAGTGCGCTTACGGCGACTGCAACGCCTCG
TGTTCGGGAAGACATCATCAAACTTCTTGGATTAGATACTTCCAAGTTGA
AGATCTTCAACACTCCTTCTGCGCGTCCGAACATACATTACGAGATAAGG
TACCTCGACGATTTTGCAAGCGACCCCACAGAGCCAGAAAACTTTCAGAT
TCACAACCTCGTCTCATGGCTCCAGTCTGTCCAGGCCCGCAGAGAGGCCG
TCACTGGCACTGCACCCGCCACGCTTCCCCCGATATCCGGGATTATCTAT
GTGCCTCTCAGGACCGTATCTGACAAACTCGCCCCTGCTCTCTCAGCAAG
CTGGCCTGGCCGTATCCACGCTGTGGCTTACCACGCTGGCCTATCCTCCG
AAGACCGTACGCGCATTCAGTCCGAATGGACATCGTCTAAGACATTCCCT
CGGCATGCAAACAATAGAAACGAATCACCGGAACACCCGGCATTTTACAT
TATAGTCGCTACTACTGCATTCGGCATGGGCATCGATAGCCCACACGTCC
GCTTCGTTGTTCATTGGAGTCCGCCACGGAGCTTCGAAGGCTTCGTTCAA
GAATCCGGTCGTGCAGGTCGCGACGGTCATGCTGCCGCATCCATTGTCTA
CTACAACACACAAGAGCGAGACAGAATTCTTGACCGTCTGCAACGAGACA
TTGAGAACGCTCGCAATCGCACTGGTGCGCATATGAGCAACCAGAACAGC
AAGGCACAAACCACCGTTCAAAATCAGCTTGCCCGATTAGCGAGCTTTCA
GAAAGTGATCAGCTACTGTGAGAATACCACACGATGCAGGCATGACCTGA
TCAAGGATTTCTTTGGCGATCTCGAACTTGAGAAGATGGGCTCCCAAGTC
CCTACGTCTGGGATAAAAACTAATGGTTCGACTGCATCACCATGTGACTT
TGCTTGTGACTTCTGCAAAGAAGGTTCGCACGCTCTTGCCCAGCGAAAGG
CGAAAATGGCTCCCGAAAGCCACTCGGACGACTTCGTCGACATGGACGTC
CCGTGGTATATGCAGAGGATGTTTCCAGGGGTGTTTTCCTGAATGGCGAC
CGACCAAGTAAAGGCACTTCAAGCTTTAGGGATTGCGGTAGCAACAATCA
ATTCCACCACTCCGATTGCTGAGAGGCGTATAATCCTGGACGACCTCCTA
TCGGGTCATCCAAAGACCCGGCTTCTCTACGTGACACCAGAACTCTGTCA
AACAGAAGGCTTTCGACGCAATCTACAGACTATTCACCGTCAGGGTGAGC
TAATTCGTGTTGCCATCGACGAAGCGCATTGCATCAGTGAATGGGGTCAT
GACTTTCGGCCGGCGTACAAAGAACTGGGCTGGTTCAAGCAAGTTTTGAC
AAATCCGCCGGTTCCAATTAGTGCGCTTACGGCGACTGCAACGCCTCGTG
TTCGGGAAGACATCATCAAACTTCTTGGATTAGATACTTCCAAGTTGAAG
ATCTTCAACACTCCTTCTGCGCGTCCGAACATACATTACGAGATAAGGTA
CCTCGACGATTTTGCAAGCGACCCCACAGAGCCAGAAAACTTTCAGATTC
ACAACCTCGTCTCATGGCTCCAGTCTGTCCAGGCCCGCAGAGAGGCCGTC
ACTGGCACTGCACCCGCCACGCTTCCCCCGATATCCGGGATTATCTATGT
GCCTCTCAGGACCGTATCTGACAAACTCGCCCCTGCTCTCTCAGCAAGCT
GGCCTGGCCGTATCCACGCTGTGGCTTACCACGCTGGCCTATCCTCCGAA
GACCGTACGCGCATTCAGTCCGAATGGACATCGTCTAAGACATTCCCTCG
GCATGCAAACAATAGAAACGAATCACCGGAACACCCGGCATTTTACATTA
TAGTCGCTACTACTGCATTCGGCATGGGCATCGATAGCCCACACGTCCGC
TTCGTTGTTCATTGGAGTCCGCCACGGAGCTTCGAAGGCTTCGTTCAAGA
ATCCGGTCGTGCAGGTCGCGACGGTCATGCTGCCGCATCCATTGTCTACT
ACAACACACAAGAGCGAGACAGAATTCTTGACCGTCTGCAACGAGACATT
GAGAACGCTCGCAATCGCACTGGTGCGCATATGAGCAACCAGAACAGCAA
GGCACAAACCACCGTTCAAAATCAGCTTGCCCGATTAGCGAGCTTTCAGA
AAGTGATCAGCTACTGTGAGAATACCACACGATGCAGGCATGACCTGATC
AAGGATTTCTTTGGCGATCTCGAACTTGAGAAGATGGGCTCCCAAGTCCC
TACGTCTGGGATAAAAACTAATGGTTCGACTGCATCACCATGTGACTTTG
CTTGTGACTTCTGCAAAGAAGGTTCGCACGCTCTTGCCCAGCGAAAGGCG
AAAATGGCTCCCGAAAGCCACTCGGACGACTTCGTCGACATGGACGTCCC
GTGGTATATGCAGAGGATGTTTCCAGGGGTGTTTTCCTGAATGGCG
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Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Molecular Function
TermDefinition
GO:0004386helicase activity
Vocabulary: Biological Process
TermDefinition
GO:0006310DNA recombination
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
ATCC64974_77670ATCC64974_77670Aspergillus niger N402gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
ATCC64974_77670-T1ATCC64974_77670-T1-proteinAspergillus niger N402polypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ATCC64974_77670-T1.cdsATCC64974_77670-T1.cdsAspergillus niger N402CDS


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ATCC64974_77670-T1.exon2ATCC64974_77670-T1.exon2Aspergillus niger N402exon
ATCC64974_77670-T1.exon1ATCC64974_77670-T1.exon1Aspergillus niger N402exon


Properties
Property NameValue
DBxrefInterPro:IPR027417
DBxrefInterPro:IPR014001
DBxrefInterPro:IPR032284
DBxrefInterPro:IPR004589
DBxrefInterPro:IPR001650
DBxrefPFAM:PF16124
DBxrefPFAM:PF00271
Producthypothetical protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger N402 whole genome analysis2021-11-01
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
OGUI01000013.1supercontigOGUI01000013.1:1336787..1338335 -
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