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ATCC64974_77810-T1, ATCC64974_77810-T1 (mRNA) Aspergillus niger N402

Overview
NameATCC64974_77810-T1
Unique NameATCC64974_77810-T1
TypemRNA
OrganismAspergillus niger N402
Sequences
The following sequences are available for this feature:

mRNA from alignment at OGUI01000013.1:1379484..1381396-

Legend: polypeptideCDSexon
Hold the cursor over a type above to highlight its positions in the sequence below.
>ATCC64974_77810-T1 ID=ATCC64974_77810-T1|Name=ATCC64974_77810-T1|organism=Aspergillus niger N402|type=mRNA|length=1913bp|location=Sequence derived from alignment at OGUI01000013.1:1379484..1381396- (Aspergillus niger N402)
ATGGCCGCCGCCGATGTTCGCGACATGCTGGATCTGCCCGCGGAGGGCCA
GCCCCGACCTCATAAGAAACAGAAGGTCGTCGAGAAGCGTCCAGGTGGGC
TTCTCTCAGTTCCCTTACTCACCTAAAATTAATCTGACACATTCCCATCG
CTAGAGGGTATCACCCGTGAGCTCTATGCTCTGCTAGGCGAACGAGCGCC
CCCGATCGCCATCAACGAGAACCGATACAAGGGACGTCCGAAATGGACGA
GCAAAAAGCGCGTACAGCCATGGTACGCACACATCACCATATCAACTGCT
CTCCGATTCCAAATACTGACTCCATCAGGCGCATGACCCCCTTCATAAAC
AGCGCCCGCTCCGATGGCCTCGTTCTCCGCCACTGGCAACGCCAGCATGA
ATCCGCCAAGGTCCCCGCGCTGGAGGGCTCCGAGATGGACGTGGACGAGA
AAGAGGACAACGCCGATGCCTCAACCTCCGATAACGTGCCGCAGCAAGAC
TCCCTATTCGCCAAATACAACATCAAAGCCCGCGTACCCAACCGCTACAC
AGACGAGGAATACAATCGCCATCTCAAGAACGACGACTGGACGCGCCAGG
AAACCGACTACCTCATGGACCTAGTCGAAGAATACGACCTCCGCTGGGTC
GTAATCGCCGATCGCTACGACTATCAACCGCACCCCGTCGATGGCGACAG
CAACAACGCCAGCGCCCTCGTCCCCGCAAAGCAATACCGAACCATGGAGC
AGATGAAATCGCGCTACTACTTCATCGCCGCGAGCATGCTCGCACTCGAG
CACCCACCCTCCGAGATGTCGGAAGCCGAATTTGAACTGCACGAAAAGAT
GCTCAAATTCGACGCCGACCGTGAACGCTCCCGCAAAGAACTCGCCGCCC
TCCAACTCAACCGCACAGCCGACGAAGTCCGCGAAGAAAGCGTCCTCCTC
GAAGAACTCAAACGCATCACCGCCAACGAGCAAGATTTCATCACGGAACG
TCGCGAACTCTACTCCCGCCTTGAAGTCCCTATCAGCGTCGGCAACACAA
CCATGTACCAATCCAGCCAAGGCCTCTCGCAACTCCTCCAAACCCTCCTC
CAAGCCGACAAGAGCAAGAAACGCCGCTCCATCCTGGGCCCCGAAGGCGG
TGCCGCTCCCAGCCCCGCCGGCGCAACCCCGGCCCCCAACGCCCCCAGCA
GCGCCCGCGACAGCCGCGCCGACACCCCCAACGCGACGCCCGCCGCCGCC
CCAACCAACAAAAAGGCCGCCGCGGCAGCCGCAGCCGCAGCCGCAGCAGC
GAACAAAGAAGCGCAACAACAAGCCGTCCGGACCCTCACACCCGCCGAAG
AAGCCAAATACGGCGTGCAGCACCACGACCGACTGGCGCCGGGCGTGCAA
TTCCGCAGTGACCGCGCGCAGAAGCTCACACAGGCGAAATCGAACGTGCA
GACGCAGAAACTCGCTGCTGCGCTGGCGGAACTGGAGGTGCCGCTGCGGC
TTGTCATGCCGACGGAGCGTGTCTGCAAGGATTTTGAGAAGCTGATTCAT
TCGGTGAATCTGCTGCTGGAGGCGCGGAAGGTGTCGGAGAAGGTGGAGAG
TGAGATTCGGGTTTTGGAGGCTGCGAAGGAGGAACGTGAGAAGAAGGCGA
AGGAGGCGCTGGAGAAGGATAGTAAGCCTGAGGTCAAATCGGAGCAGCAG
GAGGATCAGCCACTTCCTGCGGCGGCGGAGGAGGAGGAGGAGGCTGCGGG
TGCTGGGGATGCGGAGGGGCAGGAGAAGGGTGCGACAGATAAATCGGGAG
AGAAGGCAGAAGGTGGTGCTGCTGGTGAAGAGGGAGATGTGACTTCGCAT
AAACGCTCTGCTAGTGTTCTGAGCAATGCTAGTGATAAGAGTACGAAGCG
GCAAAGGAAGTAA
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Coding sequence (CDS) from alignment at OGUI01000013.1:1379484..1381396-

>ATCC64974_77810-T1 ID=ATCC64974_77810-T1|Name=ATCC64974_77810-T1|organism=Aspergillus niger N402|type=CDS|length=5391bp|location=Sequence derived from alignment at OGUI01000013.1:1379484..1381396- (Aspergillus niger N402)
GCGCATGACCCCCTTCATAAACAGCGCCCGCTCCGATGGCCTCGTTCTCC
GCCACTGGCAACGCCAGCATGAATCCGCCAAGGTCCCCGCGCTGGAGGGC
TCCGAGATGGACGTGGACGAGAAAGAGGACAACGCCGATGCCTCAACCTC
CGATAACGTGCCGCAGCAAGACTCCCTATTCGCCAAATACAACATCAAAG
CCCGCGTACCCAACCGCTACACAGACGAGGAATACAATCGCCATCTCAAG
AACGACGACTGGACGCGCCAGGAAACCGACTACCTCATGGACCTAGTCGA
AGAATACGACCTCCGCTGGGTCGTAATCGCCGATCGCTACGACTATCAAC
CGCACCCCGTCGATGGCGACAGCAACAACGCCAGCGCCCTCGTCCCCGCA
AAGCAATACCGAACCATGGAGCAGATGAAATCGCGCTACTACTTCATCGC
CGCGAGCATGCTCGCACTCGAGCACCCACCCTCCGAGATGTCGGAAGCCG
AATTTGAACTGCACGAAAAGATGCTCAAATTCGACGCCGACCGTGAACGC
TCCCGCAAAGAACTCGCCGCCCTCCAACTCAACCGCACAGCCGACGAAGT
CCGCGAAGAAAGCGTCCTCCTCGAAGAACTCAAACGCATCACCGCCAACG
AGCAAGATTTCATCACGGAACGTCGCGAACTCTACTCCCGCCTTGAAGTC
CCTATCAGCGTCGGCAACACAACCATGTACCAATCCAGCCAAGGCCTCTC
GCAACTCCTCCAAACCCTCCTCCAAGCCGACAAGAGCAAGAAACGCCGCT
CCATCCTGGGCCCCGAAGGCGGTGCCGCTCCCAGCCCCGCCGGCGCAACC
CCGGCCCCCAACGCCCCCAGCAGCGCCCGCGACAGCCGCGCCGACACCCC
CAACGCGACGCCCGCCGCCGCCCCAACCAACAAAAAGGCCGCCGCGGCAG
CCGCAGCCGCAGCCGCAGCAGCGAACAAAGAAGCGCAACAACAAGCCGTC
CGGACCCTCACACCCGCCGAAGAAGCCAAATACGGCGTGCAGCACCACGA
CCGACTGGCGCCGGGCGTGCAATTCCGCAGTGACCGCGCGCAGAAGCTCA
CACAGGCGAAATCGAACGTGCAGACGCAGAAACTCGCTGCTGCGCTGGCG
GAACTGGAGGTGCCGCTGCGGCTTGTCATGCCGACGGAGCGTGTCTGCAA
GGATTTTGAGAAGCTGATTCATTCGGTGAATCTGCTGCTGGAGGCGCGGA
AGGTGTCGGAGAAGGTGGAGAGTGAGATTCGGGTTTTGGAGGCTGCGAAG
GAGGAACGTGAGAAGAAGGCGAAGGAGGCGCTGGAGAAGGATAGTAAGCC
TGAGGTCAAATCGGAGCAGCAGGAGGATCAGCCACTTCCTGCGGCGGCGG
AGGAGGAGGAGGAGGCTGCGGGTGCTGGGGATGCGGAGGGGCAGGAGAAG
GGTGCGACAGATAAATCGGGAGAGAAGGCAGAAGGTGGTGCTGCTGGTGA
AGAGGGAGATGTGACTTCGCATAAACGCTCTGCTAGTGTTCTGAGCAATG
CTAGTGATAAGAGTACGAAGCGGCAAAGGAAGTAAAGGGTATCACCCGTG
AGCTCTATGCTCTGCTAGGCGAACGAGCGCCCCCGATCGCCATCAACGAG
AACCGATACAAGGGACGTCCGAAATGGACGAGCAAAAAGCGCGTACAGCC
ATGATGGCCGCCGCCGATGTTCGCGACATGCTGGATCTGCCCGCGGAGGG
CCAGCCCCGACCTCATAAGAAACAGAAGGTCGTCGAGAAGCGTCCAGGCG
CATGACCCCCTTCATAAACAGCGCCCGCTCCGATGGCCTCGTTCTCCGCC
ACTGGCAACGCCAGCATGAATCCGCCAAGGTCCCCGCGCTGGAGGGCTCC
GAGATGGACGTGGACGAGAAAGAGGACAACGCCGATGCCTCAACCTCCGA
TAACGTGCCGCAGCAAGACTCCCTATTCGCCAAATACAACATCAAAGCCC
GCGTACCCAACCGCTACACAGACGAGGAATACAATCGCCATCTCAAGAAC
GACGACTGGACGCGCCAGGAAACCGACTACCTCATGGACCTAGTCGAAGA
ATACGACCTCCGCTGGGTCGTAATCGCCGATCGCTACGACTATCAACCGC
ACCCCGTCGATGGCGACAGCAACAACGCCAGCGCCCTCGTCCCCGCAAAG
CAATACCGAACCATGGAGCAGATGAAATCGCGCTACTACTTCATCGCCGC
GAGCATGCTCGCACTCGAGCACCCACCCTCCGAGATGTCGGAAGCCGAAT
TTGAACTGCACGAAAAGATGCTCAAATTCGACGCCGACCGTGAACGCTCC
CGCAAAGAACTCGCCGCCCTCCAACTCAACCGCACAGCCGACGAAGTCCG
CGAAGAAAGCGTCCTCCTCGAAGAACTCAAACGCATCACCGCCAACGAGC
AAGATTTCATCACGGAACGTCGCGAACTCTACTCCCGCCTTGAAGTCCCT
ATCAGCGTCGGCAACACAACCATGTACCAATCCAGCCAAGGCCTCTCGCA
ACTCCTCCAAACCCTCCTCCAAGCCGACAAGAGCAAGAAACGCCGCTCCA
TCCTGGGCCCCGAAGGCGGTGCCGCTCCCAGCCCCGCCGGCGCAACCCCG
GCCCCCAACGCCCCCAGCAGCGCCCGCGACAGCCGCGCCGACACCCCCAA
CGCGACGCCCGCCGCCGCCCCAACCAACAAAAAGGCCGCCGCGGCAGCCG
CAGCCGCAGCCGCAGCAGCGAACAAAGAAGCGCAACAACAAGCCGTCCGG
ACCCTCACACCCGCCGAAGAAGCCAAATACGGCGTGCAGCACCACGACCG
ACTGGCGCCGGGCGTGCAATTCCGCAGTGACCGCGCGCAGAAGCTCACAC
AGGCGAAATCGAACGTGCAGACGCAGAAACTCGCTGCTGCGCTGGCGGAA
CTGGAGGTGCCGCTGCGGCTTGTCATGCCGACGGAGCGTGTCTGCAAGGA
TTTTGAGAAGCTGATTCATTCGGTGAATCTGCTGCTGGAGGCGCGGAAGG
TGTCGGAGAAGGTGGAGAGTGAGATTCGGGTTTTGGAGGCTGCGAAGGAG
GAACGTGAGAAGAAGGCGAAGGAGGCGCTGGAGAAGGATAGTAAGCCTGA
GGTCAAATCGGAGCAGCAGGAGGATCAGCCACTTCCTGCGGCGGCGGAGG
AGGAGGAGGAGGCTGCGGGTGCTGGGGATGCGGAGGGGCAGGAGAAGGGT
GCGACAGATAAATCGGGAGAGAAGGCAGAAGGTGGTGCTGCTGGTGAAGA
GGGAGATGTGACTTCGCATAAACGCTCTGCTAGTGTTCTGAGCAATGCTA
GTGATAAGAGTACGAAGCGGCAAAGGAAGTAAAGGGTATCACCCGTGAGC
TCTATGCTCTGCTAGGCGAACGAGCGCCCCCGATCGCCATCAACGAGAAC
CGATACAAGGGACGTCCGAAATGGACGAGCAAAAAGCGCGTACAGCCATG
ATGGCCGCCGCCGATGTTCGCGACATGCTGGATCTGCCCGCGGAGGGCCA
GCCCCGACCTCATAAGAAACAGAAGGTCGTCGAGAAGCGTCCAGGCGCAT
GACCCCCTTCATAAACAGCGCCCGCTCCGATGGCCTCGTTCTCCGCCACT
GGCAACGCCAGCATGAATCCGCCAAGGTCCCCGCGCTGGAGGGCTCCGAG
ATGGACGTGGACGAGAAAGAGGACAACGCCGATGCCTCAACCTCCGATAA
CGTGCCGCAGCAAGACTCCCTATTCGCCAAATACAACATCAAAGCCCGCG
TACCCAACCGCTACACAGACGAGGAATACAATCGCCATCTCAAGAACGAC
GACTGGACGCGCCAGGAAACCGACTACCTCATGGACCTAGTCGAAGAATA
CGACCTCCGCTGGGTCGTAATCGCCGATCGCTACGACTATCAACCGCACC
CCGTCGATGGCGACAGCAACAACGCCAGCGCCCTCGTCCCCGCAAAGCAA
TACCGAACCATGGAGCAGATGAAATCGCGCTACTACTTCATCGCCGCGAG
CATGCTCGCACTCGAGCACCCACCCTCCGAGATGTCGGAAGCCGAATTTG
AACTGCACGAAAAGATGCTCAAATTCGACGCCGACCGTGAACGCTCCCGC
AAAGAACTCGCCGCCCTCCAACTCAACCGCACAGCCGACGAAGTCCGCGA
AGAAAGCGTCCTCCTCGAAGAACTCAAACGCATCACCGCCAACGAGCAAG
ATTTCATCACGGAACGTCGCGAACTCTACTCCCGCCTTGAAGTCCCTATC
AGCGTCGGCAACACAACCATGTACCAATCCAGCCAAGGCCTCTCGCAACT
CCTCCAAACCCTCCTCCAAGCCGACAAGAGCAAGAAACGCCGCTCCATCC
TGGGCCCCGAAGGCGGTGCCGCTCCCAGCCCCGCCGGCGCAACCCCGGCC
CCCAACGCCCCCAGCAGCGCCCGCGACAGCCGCGCCGACACCCCCAACGC
GACGCCCGCCGCCGCCCCAACCAACAAAAAGGCCGCCGCGGCAGCCGCAG
CCGCAGCCGCAGCAGCGAACAAAGAAGCGCAACAACAAGCCGTCCGGACC
CTCACACCCGCCGAAGAAGCCAAATACGGCGTGCAGCACCACGACCGACT
GGCGCCGGGCGTGCAATTCCGCAGTGACCGCGCGCAGAAGCTCACACAGG
CGAAATCGAACGTGCAGACGCAGAAACTCGCTGCTGCGCTGGCGGAACTG
GAGGTGCCGCTGCGGCTTGTCATGCCGACGGAGCGTGTCTGCAAGGATTT
TGAGAAGCTGATTCATTCGGTGAATCTGCTGCTGGAGGCGCGGAAGGTGT
CGGAGAAGGTGGAGAGTGAGATTCGGGTTTTGGAGGCTGCGAAGGAGGAA
CGTGAGAAGAAGGCGAAGGAGGCGCTGGAGAAGGATAGTAAGCCTGAGGT
CAAATCGGAGCAGCAGGAGGATCAGCCACTTCCTGCGGCGGCGGAGGAGG
AGGAGGAGGCTGCGGGTGCTGGGGATGCGGAGGGGCAGGAGAAGGGTGCG
ACAGATAAATCGGGAGAGAAGGCAGAAGGTGGTGCTGCTGGTGAAGAGGG
AGATGTGACTTCGCATAAACGCTCTGCTAGTGTTCTGAGCAATGCTAGTG
ATAAGAGTACGAAGCGGCAAAGGAAGTAAAGGGTATCACCCGTGAGCTCT
ATGCTCTGCTAGGCGAACGAGCGCCCCCGATCGCCATCAACGAGAACCGA
TACAAGGGACGTCCGAAATGGACGAGCAAAAAGCGCGTACAGCCATGATG
GCCGCCGCCGATGTTCGCGACATGCTGGATCTGCCCGCGGAGGGCCAGCC
CCGACCTCATAAGAAACAGAAGGTCGTCGAGAAGCGTCCAG
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Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Cellular Component
TermDefinition
GO:0005634nucleus
Vocabulary: Biological Process
TermDefinition
GO:0045892negative regulation of transcription, DNA-templated
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
SWC4ATCC64974_77810Aspergillus niger N402gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
ATCC64974_77810-T1ATCC64974_77810-T1-proteinAspergillus niger N402polypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ATCC64974_77810-T1.cdsATCC64974_77810-T1.cdsAspergillus niger N402CDS


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ATCC64974_77810-T1.exon3ATCC64974_77810-T1.exon3Aspergillus niger N402exon
ATCC64974_77810-T1.exon2ATCC64974_77810-T1.exon2Aspergillus niger N402exon
ATCC64974_77810-T1.exon1ATCC64974_77810-T1.exon1Aspergillus niger N402exon


Properties
Property NameValue
NoteBUSCO:EOG09262OLP
DBxrefInterPro:IPR017877
DBxrefInterPro:IPR032563
DBxrefInterPro:IPR008468
DBxrefPFAM:PF16282
DBxrefPFAM:PF05499
Productswr complex subunit
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger N402 whole genome analysis2021-11-01
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
OGUI01000013.1supercontigOGUI01000013.1:1379484..1381396 -
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