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ATCC64974_77860-T1, ATCC64974_77860-T1 (mRNA) Aspergillus niger N402

Overview
NameATCC64974_77860-T1
Unique NameATCC64974_77860-T1
TypemRNA
OrganismAspergillus niger N402
Sequences
The following sequences are available for this feature:

mRNA from alignment at OGUI01000013.1:1394349..1395511-

Legend: polypeptideCDSexon
Hold the cursor over a type above to highlight its positions in the sequence below.
>ATCC64974_77860-T1 ID=ATCC64974_77860-T1|Name=ATCC64974_77860-T1|organism=Aspergillus niger N402|type=mRNA|length=1163bp|location=Sequence derived from alignment at OGUI01000013.1:1394349..1395511- (Aspergillus niger N402)
ATGGCGCAAGAACGTTCCGGAATCGTGGTCGGTCTGAACAAGGGCCACGT
ACGTTGTCCCCTGTCTTGAAGCTTGTTTTCAGTGTCCCGTTTTGTCTTTG
CGCGTGGAAAGATTTGGTCCGGTCGAGTCGTCGAGATTTCAAGCATGTGA
GCGGATTACGGAAAGGCACAACTTGGATGGGAAGAAATGAGGAAAATGCC
GGAAAATTGGGTGGAATTGAAGAATTATATGTCGGGAGAAGGGTCTTTTT
GTCTGCAATGCGGAGGAAGGATTCTTTTACAACGGCCCGACGATTCTTGC
TTGTTTCATTCGACATGGATGAGATTGGGAACCGGGAACTGAAATTGTCC
GACTCGGCTGGATCAAATCGGGACATGCTGCTTTGATATCTCCAATCATG
GAGAATTTCGCAATTGAAAGACAGAATGAAAATCAAGGACAACCGGACTA
ACATGTCTTTGATAACTTGCAGAAAACCACCCCCCTCAACACCCCCAAGA
CCCGGATCAGCCGTACCAAGGGCCAGTCTTCCCGCCGCACGGCCTTCGTT
CGTGAGATCGCCCGCGAGGTTGTCGGTCTTGCCCCCTATGAGCGTCGTAT
CATCGAACTCCTGAGAAACACTCAGGACAAGCGCGCTCGTAAGCTCGCCA
AGAAGAGAGTACGTTTGCCAGTGCCTTTACTATTCGGGGGAGGGATATGG
TTGGGAGGTTCGATTGTTTGCTTGTCCGCTTGCTCGCTCGCTCGTTCGGT
TGTCTGCTTGGCTCCGGTCCGTTGTCTATCTGCATCGTGTTCTTCGACAT
CACTACGATTTCGCTTGATCGATAAGTACGACCTCATGAGCGTCATGGCC
GGTTTATGTCTCAGAGAAGAGAACGCAATCATTCGACAATCCATCCATCA
CCAAACGATCATGAATGCCATCCGGAGACGACAACTCAAACCAACGAAGC
AAGCAAAGTACCAACGACAGAACCATCGAGCAACCAAGCAAACAAGCAAG
CAATTTGAACCACCGCCACATACCCCTCAGCTCTTCACAAACCAAAACCA
CCTGCTAACATATCTTTTTCTCTACACAGCTCGGTACCTTCGGCCGTGGC
AAGAGAAAGGTCGAGGACATGCAGCGGGTCATCGCCGAGGCCCGCCGCAC
TGGTGCTCACTAA
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Coding sequence (CDS) from alignment at OGUI01000013.1:1394349..1395511-

>ATCC64974_77860-T1 ID=ATCC64974_77860-T1|Name=ATCC64974_77860-T1|organism=Aspergillus niger N402|type=CDS|length=954bp|location=Sequence derived from alignment at OGUI01000013.1:1394349..1395511- (Aspergillus niger N402)
CTCGGTACCTTCGGCCGTGGCAAGAGAAAGGTCGAGGACATGCAGCGGGT
CATCGCCGAGGCCCGCCGCACTGGTGCTCACTAAAAAACCACCCCCCTCA
ACACCCCCAAGACCCGGATCAGCCGTACCAAGGGCCAGTCTTCCCGCCGC
ACGGCCTTCGTTCGTGAGATCGCCCGCGAGGTTGTCGGTCTTGCCCCCTA
TGAGCGTCGTATCATCGAACTCCTGAGAAACACTCAGGACAAGCGCGCTC
GTAAGCTCGCCAAGAAGAGAATGGCGCAAGAACGTTCCGGAATCGTGGTC
GGTCTGAACAAGGGCCACCTCGGTACCTTCGGCCGTGGCAAGAGAAAGGT
CGAGGACATGCAGCGGGTCATCGCCGAGGCCCGCCGCACTGGTGCTCACT
AAAAAACCACCCCCCTCAACACCCCCAAGACCCGGATCAGCCGTACCAAG
GGCCAGTCTTCCCGCCGCACGGCCTTCGTTCGTGAGATCGCCCGCGAGGT
TGTCGGTCTTGCCCCCTATGAGCGTCGTATCATCGAACTCCTGAGAAACA
CTCAGGACAAGCGCGCTCGTAAGCTCGCCAAGAAGAGAATGGCGCAAGAA
CGTTCCGGAATCGTGGTCGGTCTGAACAAGGGCCACCTCGGTACCTTCGG
CCGTGGCAAGAGAAAGGTCGAGGACATGCAGCGGGTCATCGCCGAGGCCC
GCCGCACTGGTGCTCACTAAAAAACCACCCCCCTCAACACCCCCAAGACC
CGGATCAGCCGTACCAAGGGCCAGTCTTCCCGCCGCACGGCCTTCGTTCG
TGAGATCGCCCGCGAGGTTGTCGGTCTTGCCCCCTATGAGCGTCGTATCA
TCGAACTCCTGAGAAACACTCAGGACAAGCGCGCTCGTAAGCTCGCCAAG
AAGAGAATGGCGCAAGAACGTTCCGGAATCGTGGTCGGTCTGAACAAGGG
CCAC
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Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Cellular Component
TermDefinition
GO:0005840ribosome
Vocabulary: Molecular Function
TermDefinition
GO:0003735structural constituent of ribosome
Vocabulary: Biological Process
TermDefinition
GO:0006412translation
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
RPL36ATCC64974_77860Aspergillus niger N402gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
ATCC64974_77860-T1ATCC64974_77860-T1-proteinAspergillus niger N402polypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ATCC64974_77860-T1.cdsATCC64974_77860-T1.cdsAspergillus niger N402CDS


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ATCC64974_77860-T1.exon3ATCC64974_77860-T1.exon3Aspergillus niger N402exon
ATCC64974_77860-T1.exon2ATCC64974_77860-T1.exon2Aspergillus niger N402exon
ATCC64974_77860-T1.exon1ATCC64974_77860-T1.exon1Aspergillus niger N402exon


Properties
Property NameValue
DBxrefInterPro:IPR000509
DBxrefInterPro:IPR038097
DBxrefPFAM:PF01158
Product60S ribosomal protein L36
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger N402 whole genome analysis2021-11-01
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
OGUI01000013.1supercontigOGUI01000013.1:1394349..1395511 -
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