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ATCC64974_77980-T1, ATCC64974_77980-T1 (mRNA) Aspergillus niger N402

Overview
NameATCC64974_77980-T1
Unique NameATCC64974_77980-T1
TypemRNA
OrganismAspergillus niger N402
Sequences
The following sequences are available for this feature:

mRNA from alignment at OGUI01000013.1:1434661..1436346+

Legend: exonpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>ATCC64974_77980-T1 ID=ATCC64974_77980-T1|Name=ATCC64974_77980-T1|organism=Aspergillus niger N402|type=mRNA|length=1686bp|location=Sequence derived from alignment at OGUI01000013.1:1434661..1436346+ (Aspergillus niger N402)
ATGGCTGCCAACGGCGACTTCTCTGACGACGAGTCCCAGCCTGGATCCCC
CATGCTCGATGCGAACGGTCACGATGACATCGAAGAGCAAGAGCCCCTCG
ACCAGGAGGCCAAGCCTCTGAAGTCTGCGATGAAGAAGGAAGTTCCTCCT
CCCCAGCCCAAGCGGCCAGAGCTGCCCGAGCAGCCGAATCCGGAGACTCT
GGACCTGTCCACCCTGACTCCTTTGACCCCCGAAATTATTGCGCGCCAAG
CCACAATCAACATTGGCACCATCGGTCACGTCGCTCACGGCAAGTCGACG
GTCGTTAAGGCTATCTCCGAGGTCCAGACTGTCCGTTTCAAGAACGAGTT
GGAGCGAAACATTACGATCAAGCTGGGTTATGCCAACGCAAAGATCTACA
AGTGCGACAACCCCGAGTGCCCTAGGCCGACATGCTTTAAGAGCTTTAAG
AGTGAGAAGGAAGTCGACCCGCCTTGTGAGAGGGATGGCTGCGGTGGCCG
CTACAGACTGTTGAGACATGTGTCGTACGTTGAACCTCGGACTCAAGTGT
GGACAAATTCTTCAGTGCTAACTCAGAGACCCAACTTAGTTTCGTCGACT
GCCCCGGTCACGATATTCTGATGAGTACTATGTTGTCTGGTGCCGCCGTC
ATGGACGCTGCCCTCCTCCTTATTGCCGGAAACGAAACTTGCCCTCAACC
TCAGACTTCGGAGCACTTGGCTGCCATCGAAATCATGAAGCTCAGCCACA
TCATCATTTTGCAAAACAAGGTGGACTTGATGAGAGAGGATGGTGCCCTG
CAACATTACCAGTCGATCTTGAAGTTCATCCGTGGTACTGTCGCCGATGG
CTCTCCGATCATTCCCATTTCTGCACAGCTCAAGTACAACATCGATGCTG
TCAACGAATACCTGGTTTCGCACATTCCCGTCCCCGTCCGCGATTTCACC
GCTTCCCCCCACATGATCGTCATTCGTTCCTTCGATGTGAACAAGCCTGG
TGCCGAAATTGAGGAGCTGAAGGGTGGTGTTGCCGGTGGTTCGATCTTGA
CTGGTGTTCTGAAGCAGAACGACGAGATTGAGATTCGTCCCGGTCTGGTC
ACCAAGGACGAGAACGGCAAGATTCAGTGCCGTCCCATCTTCTCTCGGGT
CATGTCCCTCTTTGCCGAGCACAACGACCTCAAGTTTGCCGTCCCTGGTG
GTTTGATTGGTGTCGGTACTCGTGTAGACCCTACTCTGTGCCGTGCTGAT
CGTCTCGTTGGTTTCGTCCTGGGTCACCGCGGACGCCTTCCCGCTATCTA
CACTGAGTTGGAAGTCAACTACTTCTTGCTTCGTCGTCTGCTCGGTGTCA
AGACTGCCGATGGCAAGCAGGCCAAGGTTGCCAAGCTTACTAAGAACGAG
GTTCTCATGGTCAACATCGGTTCTACGGCTACCGGAGCTAAGGTCGTGGG
TGTCAAGGCTGATGCTGCCAAGCTCAGCTTGACCAGCCCTGCCTGTACCG
AGGTCGGAGAGAAGATTGCCATCAGTCGGAGAATTGAGAAGCACTGGCGT
CTGATCGGTTGGGCCAACATTGTCGCGTAAGTCTTATGCTCCACTCCTTA
GCTTGCGATTTCTTCCCAGCTCTTGAGAGAATGATGTTACTAATTACGGA
AACAGTGGTAACACCCTTGAGCCCATCCTGAACTAA
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Coding sequence (CDS) from alignment at OGUI01000013.1:1434661..1436346+

>ATCC64974_77980-T1 ID=ATCC64974_77980-T1|Name=ATCC64974_77980-T1|organism=Aspergillus niger N402|type=CDS|length=4626bp|location=Sequence derived from alignment at OGUI01000013.1:1434661..1436346+ (Aspergillus niger N402)
ATGGCTGCCAACGGCGACTTCTCTGACGACGAGTCCCAGCCTGGATCCCC
CATGCTCGATGCGAACGGTCACGATGACATCGAAGAGCAAGAGCCCCTCG
ACCAGGAGGCCAAGCCTCTGAAGTCTGCGATGAAGAAGGAAGTTCCTCCT
CCCCAGCCCAAGCGGCCAGAGCTGCCCGAGCAGCCGAATCCGGAGACTCT
GGACCTGTCCACCCTGACTCCTTTGACCCCCGAAATTATTGCGCGCCAAG
CCACAATCAACATTGGCACCATCGGTCACGTCGCTCACGGCAAGTCGACG
GTCGTTAAGGCTATCTCCGAGGTCCAGACTGTCCGTTTCAAGAACGAGTT
GGAGCGAAACATTACGATCAAGCTGGGTTATGCCAACGCAAAGATCTACA
AGTGCGACAACCCCGAGTGCCCTAGGCCGACATGCTTTAAGAGCTTTAAG
AGTGAGAAGGAAGTCGACCCGCCTTGTGAGAGGGATGGCTGCGGTGGCCG
CTACAGACTGTTGAGACATGTGTCTTTCGTCGACTGCCCCGGTCACGATA
TTCTGATGAGTACTATGTTGTCTGGTGCCGCCGTCATGGACGCTGCCCTC
CTCCTTATTGCCGGAAACGAAACTTGCCCTCAACCTCAGACTTCGGAGCA
CTTGGCTGCCATCGAAATCATGAAGCTCAGCCACATCATCATTTTGCAAA
ACAAGGTGGACTTGATGAGAGAGGATGGTGCCCTGCAACATTACCAGTCG
ATCTTGAAGTTCATCCGTGGTACTGTCGCCGATGGCTCTCCGATCATTCC
CATTTCTGCACAGCTCAAGTACAACATCGATGCTGTCAACGAATACCTGG
TTTCGCACATTCCCGTCCCCGTCCGCGATTTCACCGCTTCCCCCCACATG
ATCGTCATTCGTTCCTTCGATGTGAACAAGCCTGGTGCCGAAATTGAGGA
GCTGAAGGGTGGTGTTGCCGGTGGTTCGATCTTGACTGGTGTTCTGAAGC
AGAACGACGAGATTGAGATTCGTCCCGGTCTGGTCACCAAGGACGAGAAC
GGCAAGATTCAGTGCCGTCCCATCTTCTCTCGGGTCATGTCCCTCTTTGC
CGAGCACAACGACCTCAAGTTTGCCGTCCCTGGTGGTTTGATTGGTGTCG
GTACTCGTGTAGACCCTACTCTGTGCCGTGCTGATCGTCTCGTTGGTTTC
GTCCTGGGTCACCGCGGACGCCTTCCCGCTATCTACACTGAGTTGGAAGT
CAACTACTTCTTGCTTCGTCGTCTGCTCGGTGTCAAGACTGCCGATGGCA
AGCAGGCCAAGGTTGCCAAGCTTACTAAGAACGAGGTTCTCATGGTCAAC
ATCGGTTCTACGGCTACCGGAGCTAAGGTCGTGGGTGTCAAGGCTGATGC
TGCCAAGCTCAGCTTGACCAGCCCTGCCTGTACCGAGGTCGGAGAGAAGA
TTGCCATCAGTCGGAGAATTGAGAAGCACTGGCGTCTGATCGGTTGGGCC
AACATTGTCGCTGGTAACACCCTTGAGCCCATCCTGAACTAAATGGCTGC
CAACGGCGACTTCTCTGACGACGAGTCCCAGCCTGGATCCCCCATGCTCG
ATGCGAACGGTCACGATGACATCGAAGAGCAAGAGCCCCTCGACCAGGAG
GCCAAGCCTCTGAAGTCTGCGATGAAGAAGGAAGTTCCTCCTCCCCAGCC
CAAGCGGCCAGAGCTGCCCGAGCAGCCGAATCCGGAGACTCTGGACCTGT
CCACCCTGACTCCTTTGACCCCCGAAATTATTGCGCGCCAAGCCACAATC
AACATTGGCACCATCGGTCACGTCGCTCACGGCAAGTCGACGGTCGTTAA
GGCTATCTCCGAGGTCCAGACTGTCCGTTTCAAGAACGAGTTGGAGCGAA
ACATTACGATCAAGCTGGGTTATGCCAACGCAAAGATCTACAAGTGCGAC
AACCCCGAGTGCCCTAGGCCGACATGCTTTAAGAGCTTTAAGAGTGAGAA
GGAAGTCGACCCGCCTTGTGAGAGGGATGGCTGCGGTGGCCGCTACAGAC
TGTTGAGACATGTGTCTTTCGTCGACTGCCCCGGTCACGATATTCTGATG
AGTACTATGTTGTCTGGTGCCGCCGTCATGGACGCTGCCCTCCTCCTTAT
TGCCGGAAACGAAACTTGCCCTCAACCTCAGACTTCGGAGCACTTGGCTG
CCATCGAAATCATGAAGCTCAGCCACATCATCATTTTGCAAAACAAGGTG
GACTTGATGAGAGAGGATGGTGCCCTGCAACATTACCAGTCGATCTTGAA
GTTCATCCGTGGTACTGTCGCCGATGGCTCTCCGATCATTCCCATTTCTG
CACAGCTCAAGTACAACATCGATGCTGTCAACGAATACCTGGTTTCGCAC
ATTCCCGTCCCCGTCCGCGATTTCACCGCTTCCCCCCACATGATCGTCAT
TCGTTCCTTCGATGTGAACAAGCCTGGTGCCGAAATTGAGGAGCTGAAGG
GTGGTGTTGCCGGTGGTTCGATCTTGACTGGTGTTCTGAAGCAGAACGAC
GAGATTGAGATTCGTCCCGGTCTGGTCACCAAGGACGAGAACGGCAAGAT
TCAGTGCCGTCCCATCTTCTCTCGGGTCATGTCCCTCTTTGCCGAGCACA
ACGACCTCAAGTTTGCCGTCCCTGGTGGTTTGATTGGTGTCGGTACTCGT
GTAGACCCTACTCTGTGCCGTGCTGATCGTCTCGTTGGTTTCGTCCTGGG
TCACCGCGGACGCCTTCCCGCTATCTACACTGAGTTGGAAGTCAACTACT
TCTTGCTTCGTCGTCTGCTCGGTGTCAAGACTGCCGATGGCAAGCAGGCC
AAGGTTGCCAAGCTTACTAAGAACGAGGTTCTCATGGTCAACATCGGTTC
TACGGCTACCGGAGCTAAGGTCGTGGGTGTCAAGGCTGATGCTGCCAAGC
TCAGCTTGACCAGCCCTGCCTGTACCGAGGTCGGAGAGAAGATTGCCATC
AGTCGGAGAATTGAGAAGCACTGGCGTCTGATCGGTTGGGCCAACATTGT
CGCTGGTAACACCCTTGAGCCCATCCTGAACTAAATGGCTGCCAACGGCG
ACTTCTCTGACGACGAGTCCCAGCCTGGATCCCCCATGCTCGATGCGAAC
GGTCACGATGACATCGAAGAGCAAGAGCCCCTCGACCAGGAGGCCAAGCC
TCTGAAGTCTGCGATGAAGAAGGAAGTTCCTCCTCCCCAGCCCAAGCGGC
CAGAGCTGCCCGAGCAGCCGAATCCGGAGACTCTGGACCTGTCCACCCTG
ACTCCTTTGACCCCCGAAATTATTGCGCGCCAAGCCACAATCAACATTGG
CACCATCGGTCACGTCGCTCACGGCAAGTCGACGGTCGTTAAGGCTATCT
CCGAGGTCCAGACTGTCCGTTTCAAGAACGAGTTGGAGCGAAACATTACG
ATCAAGCTGGGTTATGCCAACGCAAAGATCTACAAGTGCGACAACCCCGA
GTGCCCTAGGCCGACATGCTTTAAGAGCTTTAAGAGTGAGAAGGAAGTCG
ACCCGCCTTGTGAGAGGGATGGCTGCGGTGGCCGCTACAGACTGTTGAGA
CATGTGTCTTTCGTCGACTGCCCCGGTCACGATATTCTGATGAGTACTAT
GTTGTCTGGTGCCGCCGTCATGGACGCTGCCCTCCTCCTTATTGCCGGAA
ACGAAACTTGCCCTCAACCTCAGACTTCGGAGCACTTGGCTGCCATCGAA
ATCATGAAGCTCAGCCACATCATCATTTTGCAAAACAAGGTGGACTTGAT
GAGAGAGGATGGTGCCCTGCAACATTACCAGTCGATCTTGAAGTTCATCC
GTGGTACTGTCGCCGATGGCTCTCCGATCATTCCCATTTCTGCACAGCTC
AAGTACAACATCGATGCTGTCAACGAATACCTGGTTTCGCACATTCCCGT
CCCCGTCCGCGATTTCACCGCTTCCCCCCACATGATCGTCATTCGTTCCT
TCGATGTGAACAAGCCTGGTGCCGAAATTGAGGAGCTGAAGGGTGGTGTT
GCCGGTGGTTCGATCTTGACTGGTGTTCTGAAGCAGAACGACGAGATTGA
GATTCGTCCCGGTCTGGTCACCAAGGACGAGAACGGCAAGATTCAGTGCC
GTCCCATCTTCTCTCGGGTCATGTCCCTCTTTGCCGAGCACAACGACCTC
AAGTTTGCCGTCCCTGGTGGTTTGATTGGTGTCGGTACTCGTGTAGACCC
TACTCTGTGCCGTGCTGATCGTCTCGTTGGTTTCGTCCTGGGTCACCGCG
GACGCCTTCCCGCTATCTACACTGAGTTGGAAGTCAACTACTTCTTGCTT
CGTCGTCTGCTCGGTGTCAAGACTGCCGATGGCAAGCAGGCCAAGGTTGC
CAAGCTTACTAAGAACGAGGTTCTCATGGTCAACATCGGTTCTACGGCTA
CCGGAGCTAAGGTCGTGGGTGTCAAGGCTGATGCTGCCAAGCTCAGCTTG
ACCAGCCCTGCCTGTACCGAGGTCGGAGAGAAGATTGCCATCAGTCGGAG
AATTGAGAAGCACTGGCGTCTGATCGGTTGGGCCAACATTGTCGCTGGTA
ACACCCTTGAGCCCATCCTGAACTAA
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Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Molecular Function
TermDefinition
GO:0005525GTP binding
GO:0003924GTPase activity
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
GCD11ATCC64974_77980Aspergillus niger N402gene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ATCC64974_77980-T1.exon1ATCC64974_77980-T1.exon1Aspergillus niger N402exon
ATCC64974_77980-T1.exon2ATCC64974_77980-T1.exon2Aspergillus niger N402exon
ATCC64974_77980-T1.exon3ATCC64974_77980-T1.exon3Aspergillus niger N402exon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ATCC64974_77980-T1.cdsATCC64974_77980-T1.cdsAspergillus niger N402CDS


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
ATCC64974_77980-T1ATCC64974_77980-T1-proteinAspergillus niger N402polypeptide


Properties
Property NameValue
NoteBUSCO:EOG09261TPN
DBxrefInterPro:IPR009001
DBxrefInterPro:IPR009000
DBxrefInterPro:IPR027417
DBxrefInterPro:IPR004161
DBxrefInterPro:IPR015256
DBxrefInterPro:IPR000795
DBxrefPFAM:PF03144
DBxrefPFAM:PF00009
DBxrefPFAM:PF09173
Producteukaryotic translation initiation factor 2 subunit gamma
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger N402 whole genome analysis2021-11-01
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
OGUI01000013.1supercontigOGUI01000013.1:1434661..1436346 +
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