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ATCC64974_78050-T1, ATCC64974_78050-T1 (mRNA) Aspergillus niger N402

Overview
NameATCC64974_78050-T1
Unique NameATCC64974_78050-T1
TypemRNA
OrganismAspergillus niger N402
Sequences
The following sequences are available for this feature:

mRNA from alignment at OGUI01000013.1:1450640..1451237-

Legend: polypeptideCDSexon
Hold the cursor over a type above to highlight its positions in the sequence below.
>ATCC64974_78050-T1 ID=ATCC64974_78050-T1|Name=ATCC64974_78050-T1|organism=Aspergillus niger N402|type=mRNA|length=598bp|location=Sequence derived from alignment at OGUI01000013.1:1450640..1451237- (Aspergillus niger N402)
ATGGTATGTGTTAATGTTATTTCGATCTGAGAATACCCTCAATGGGCGGC
TAACAAGCAATCAGGTTTTCATTTTGGGCGTGAACTTCCCCGAGCGAAAC
CTCGTCAAGGCAAGCAACTCCGAACTTCCATTTTACCTTCAACGCCTGGT
CTGACTGAAATCAGAAATCGCTCGAGTCCTTCTTCGGCATCGGTAACTTG
ACCTCGACCCGTCTCCTTGCCCGCTTCCATATCCACCCAACATGCAAGGT
TGGCGACTTGGCGAACAAGCAGGTCCTCGACATCACGGCCGCCTTGTCCG
ACATGAAGATTGAGAACGATCTCCGCAGACAGTACCTCGATAACATCAAG
CGTTTGAAGGAGACAGGAACCTACCGTGGTCGGCGTCATGCGCTCGGCTT
GCCCGTTCGGGGACAGCGGACGAGGAGCCAGGTAGGTTTATTCCTATATC
CAGTTTCCCCCAATATGATACTAGGGAATGTTGAAGCACTTCGCTGGTGG
ACGTGGTCGTGGGGTATTGCACAAAAGAAGATTTATACTAACGTAATCAC
CAGATCAAAACTGCTGTCAAGCTCAACCGTATGGAGAGAAGACTGTGA
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Coding sequence (CDS) from alignment at OGUI01000013.1:1450640..1451237-

>ATCC64974_78050-T1 ID=ATCC64974_78050-T1|Name=ATCC64974_78050-T1|organism=Aspergillus niger N402|type=CDS|length=1440bp|location=Sequence derived from alignment at OGUI01000013.1:1450640..1451237- (Aspergillus niger N402)
ATCAAAACTGCTGTCAAGCTCAACCGTATGGAGAGAAGACTGTGAAAATC
GCTCGAGTCCTTCTTCGGCATCGGTAACTTGACCTCGACCCGTCTCCTTG
CCCGCTTCCATATCCACCCAACATGCAAGGTTGGCGACTTGGCGAACAAG
CAGGTCCTCGACATCACGGCCGCCTTGTCCGACATGAAGATTGAGAACGA
TCTCCGCAGACAGTACCTCGATAACATCAAGCGTTTGAAGGAGACAGGAA
CCTACCGTGGTCGGCGTCATGCGCTCGGCTTGCCCGTTCGGGGACAGCGG
ACGAGGAGCCAGGTTTTCATTTTGGGCGTGAACTTCCCCGAGCGAAACCT
CGTCAAGATGATCAAAACTGCTGTCAAGCTCAACCGTATGGAGAGAAGAC
TGTGAAAATCGCTCGAGTCCTTCTTCGGCATCGGTAACTTGACCTCGACC
CGTCTCCTTGCCCGCTTCCATATCCACCCAACATGCAAGGTTGGCGACTT
GGCGAACAAGCAGGTCCTCGACATCACGGCCGCCTTGTCCGACATGAAGA
TTGAGAACGATCTCCGCAGACAGTACCTCGATAACATCAAGCGTTTGAAG
GAGACAGGAACCTACCGTGGTCGGCGTCATGCGCTCGGCTTGCCCGTTCG
GGGACAGCGGACGAGGAGCCAGGTTTTCATTTTGGGCGTGAACTTCCCCG
AGCGAAACCTCGTCAAGATGATCAAAACTGCTGTCAAGCTCAACCGTATG
GAGAGAAGACTGTGAAAATCGCTCGAGTCCTTCTTCGGCATCGGTAACTT
GACCTCGACCCGTCTCCTTGCCCGCTTCCATATCCACCCAACATGCAAGG
TTGGCGACTTGGCGAACAAGCAGGTCCTCGACATCACGGCCGCCTTGTCC
GACATGAAGATTGAGAACGATCTCCGCAGACAGTACCTCGATAACATCAA
GCGTTTGAAGGAGACAGGAACCTACCGTGGTCGGCGTCATGCGCTCGGCT
TGCCCGTTCGGGGACAGCGGACGAGGAGCCAGGTTTTCATTTTGGGCGTG
AACTTCCCCGAGCGAAACCTCGTCAAGATGATCAAAACTGCTGTCAAGCT
CAACCGTATGGAGAGAAGACTGTGAAAATCGCTCGAGTCCTTCTTCGGCA
TCGGTAACTTGACCTCGACCCGTCTCCTTGCCCGCTTCCATATCCACCCA
ACATGCAAGGTTGGCGACTTGGCGAACAAGCAGGTCCTCGACATCACGGC
CGCCTTGTCCGACATGAAGATTGAGAACGATCTCCGCAGACAGTACCTCG
ATAACATCAAGCGTTTGAAGGAGACAGGAACCTACCGTGGTCGGCGTCAT
GCGCTCGGCTTGCCCGTTCGGGGACAGCGGACGAGGAGCCAGGTTTTCAT
TTTGGGCGTGAACTTCCCCGAGCGAAACCTCGTCAAGATG
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Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Cellular Component
TermDefinition
GO:0005840ribosome
Vocabulary: Biological Process
TermDefinition
GO:0006412translation
Vocabulary: Molecular Function
TermDefinition
GO:0003676nucleic acid binding
GO:0003723RNA binding
GO:0003735structural constituent of ribosome
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
ATCC64974_78050ATCC64974_78050Aspergillus niger N402gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
ATCC64974_78050-T1ATCC64974_78050-T1-proteinAspergillus niger N402polypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ATCC64974_78050-T1.cdsATCC64974_78050-T1.cdsAspergillus niger N402CDS


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ATCC64974_78050-T1.exon4ATCC64974_78050-T1.exon4Aspergillus niger N402exon
ATCC64974_78050-T1.exon3ATCC64974_78050-T1.exon3Aspergillus niger N402exon
ATCC64974_78050-T1.exon2ATCC64974_78050-T1.exon2Aspergillus niger N402exon
ATCC64974_78050-T1.exon1ATCC64974_78050-T1.exon1Aspergillus niger N402exon


Properties
Property NameValue
DBxrefInterPro:IPR010979
DBxrefInterPro:IPR018269
DBxrefInterPro:IPR001892
DBxrefInterPro:IPR027437
DBxrefPFAM:PF00416
Producthypothetical protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger N402 whole genome analysis2021-11-01
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
OGUI01000013.1supercontigOGUI01000013.1:1450640..1451237 -
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