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ATCC64974_78150-T1, ATCC64974_78150-T1 (mRNA) Aspergillus niger N402

Overview
NameATCC64974_78150-T1
Unique NameATCC64974_78150-T1
TypemRNA
OrganismAspergillus niger N402
Sequences
The following sequences are available for this feature:

mRNA from alignment at OGUI01000013.1:1488237..1488993-

Legend: polypeptideCDSexon
Hold the cursor over a type above to highlight its positions in the sequence below.
>ATCC64974_78150-T1 ID=ATCC64974_78150-T1|Name=ATCC64974_78150-T1|organism=Aspergillus niger N402|type=mRNA|length=757bp|location=Sequence derived from alignment at OGUI01000013.1:1488237..1488993- (Aspergillus niger N402)
ATGCAGTCGGAATCCAAGGACAAGTCCGCCAACCCTATGCGCGAGCTGCG
CATCCAGAAGCTCGTGCTTAACATCTCCGTCGGCGAGTCTGGTGACAGAC
TTACTCGCGCTGCTAAGGTGCTCGAGCAGCTGAGCGGTCAGACTCCGGTC
TACAGTAAGAACGCCCGATCCCGACGAATCCGAGAAATTCGAACACAAAG
CCGCCGAGGAAGGAGGATATGACAACTGTGTTATGGAATGGATGGCTGAT
GGGATGATTTTTTCAACGTTTAGGCAAGGCCCGTTACACCGTCCGTACCT
TCGGTATCCGTCGTAACGAGAAGATCTCCGTCCACGTTACCGTCCGTGGT
CCCAAGGCCGAGGAGATCCTTGAGCGTGGTCTCAAGGTCAAGGAGTACGA
GCTCCGCAAGCGCAACTTCTCTGAGACCGGTAACTTCGGTTTCGGTATCT
CCGAGCACATCGATCTGGGTATCAAGTACGACCCCGGTATCGGTATCTAC
GGCATGGACTTCTACTGCTGCATGTGAGTGCATTTGGACCTCTACGCAGT
CCTGGTTCGACAGATCCATCGGTGTCAATCCAGATCGAGCAGGACAAGTC
GAGTATCAGCAACTGACTTGGAATCAATAGGACCCGCCCTGGTGAGCGTG
TCGCCAAGCGCCGCCGCTGCAAGGCCCGTATCGGCTCCCAGCACCGTATC
ACCCAGAACGAGACCATCAAGTGGTTCAAGAACCGCTTCGACGGTATCGT
CCGGTAA
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Coding sequence (CDS) from alignment at OGUI01000013.1:1488237..1488993-

>ATCC64974_78150-T1 ID=ATCC64974_78150-T1|Name=ATCC64974_78150-T1|organism=Aspergillus niger N402|type=CDS|length=1593bp|location=Sequence derived from alignment at OGUI01000013.1:1488237..1488993- (Aspergillus niger N402)
GACCCGCCCTGGTGAGCGTGTCGCCAAGCGCCGCCGCTGCAAGGCCCGTA
TCGGCTCCCAGCACCGTATCACCCAGAACGAGACCATCAAGTGGTTCAAG
AACCGCTTCGACGGTATCGTCCGGTAAGCAAGGCCCGTTACACCGTCCGT
ACCTTCGGTATCCGTCGTAACGAGAAGATCTCCGTCCACGTTACCGTCCG
TGGTCCCAAGGCCGAGGAGATCCTTGAGCGTGGTCTCAAGGTCAAGGAGT
ACGAGCTCCGCAAGCGCAACTTCTCTGAGACCGGTAACTTCGGTTTCGGT
ATCTCCGAGCACATCGATCTGGGTATCAAGTACGACCCCGGTATCGGTAT
CTACGGCATGGACTTCTACTGCTGCATATGCAGTCGGAATCCAAGGACAA
GTCCGCCAACCCTATGCGCGAGCTGCGCATCCAGAAGCTCGTGCTTAACA
TCTCCGTCGGCGAGTCTGGTGACAGACTTACTCGCGCTGCTAAGGTGCTC
GAGCAGCTGAGCGGTCAGACTCCGGTCTACAGACCCGCCCTGGTGAGCGT
GTCGCCAAGCGCCGCCGCTGCAAGGCCCGTATCGGCTCCCAGCACCGTAT
CACCCAGAACGAGACCATCAAGTGGTTCAAGAACCGCTTCGACGGTATCG
TCCGGTAAGCAAGGCCCGTTACACCGTCCGTACCTTCGGTATCCGTCGTA
ACGAGAAGATCTCCGTCCACGTTACCGTCCGTGGTCCCAAGGCCGAGGAG
ATCCTTGAGCGTGGTCTCAAGGTCAAGGAGTACGAGCTCCGCAAGCGCAA
CTTCTCTGAGACCGGTAACTTCGGTTTCGGTATCTCCGAGCACATCGATC
TGGGTATCAAGTACGACCCCGGTATCGGTATCTACGGCATGGACTTCTAC
TGCTGCATATGCAGTCGGAATCCAAGGACAAGTCCGCCAACCCTATGCGC
GAGCTGCGCATCCAGAAGCTCGTGCTTAACATCTCCGTCGGCGAGTCTGG
TGACAGACTTACTCGCGCTGCTAAGGTGCTCGAGCAGCTGAGCGGTCAGA
CTCCGGTCTACAGACCCGCCCTGGTGAGCGTGTCGCCAAGCGCCGCCGCT
GCAAGGCCCGTATCGGCTCCCAGCACCGTATCACCCAGAACGAGACCATC
AAGTGGTTCAAGAACCGCTTCGACGGTATCGTCCGGTAAGCAAGGCCCGT
TACACCGTCCGTACCTTCGGTATCCGTCGTAACGAGAAGATCTCCGTCCA
CGTTACCGTCCGTGGTCCCAAGGCCGAGGAGATCCTTGAGCGTGGTCTCA
AGGTCAAGGAGTACGAGCTCCGCAAGCGCAACTTCTCTGAGACCGGTAAC
TTCGGTTTCGGTATCTCCGAGCACATCGATCTGGGTATCAAGTACGACCC
CGGTATCGGTATCTACGGCATGGACTTCTACTGCTGCATATGCAGTCGGA
ATCCAAGGACAAGTCCGCCAACCCTATGCGCGAGCTGCGCATCCAGAAGC
TCGTGCTTAACATCTCCGTCGGCGAGTCTGGTGACAGACTTACTCGCGCT
GCTAAGGTGCTCGAGCAGCTGAGCGGTCAGACTCCGGTCTACA
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Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Cellular Component
TermDefinition
GO:0005840ribosome
Vocabulary: Biological Process
TermDefinition
GO:0006412translation
Vocabulary: Molecular Function
TermDefinition
GO:0003735structural constituent of ribosome
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
RPL11ATCC64974_78150Aspergillus niger N402gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
ATCC64974_78150-T1ATCC64974_78150-T1-proteinAspergillus niger N402polypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ATCC64974_78150-T1.cdsATCC64974_78150-T1.cdsAspergillus niger N402CDS


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ATCC64974_78150-T1.exon3ATCC64974_78150-T1.exon3Aspergillus niger N402exon
ATCC64974_78150-T1.exon2ATCC64974_78150-T1.exon2Aspergillus niger N402exon
ATCC64974_78150-T1.exon1ATCC64974_78150-T1.exon1Aspergillus niger N402exon


Properties
Property NameValue
NoteBUSCO:EOG09264X8J
DBxrefInterPro:IPR020929
DBxrefInterPro:IPR031310
DBxrefInterPro:IPR002132
DBxrefInterPro:IPR031309
DBxrefInterPro:IPR022803
DBxrefPFAM:PF00673
DBxrefPFAM:PF00281
Product60S ribosomal protein L11
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger N402 whole genome analysis2021-11-01
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
OGUI01000013.1supercontigOGUI01000013.1:1488237..1488993 -
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