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ATCC64974_78210-T1, ATCC64974_78210-T1 (mRNA) Aspergillus niger N402

Overview
NameATCC64974_78210-T1
Unique NameATCC64974_78210-T1
TypemRNA
OrganismAspergillus niger N402
Sequences
The following sequences are available for this feature:

mRNA from alignment at OGUI01000013.1:1503950..1505569+

Legend: exonpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>ATCC64974_78210-T1 ID=ATCC64974_78210-T1|Name=ATCC64974_78210-T1|organism=Aspergillus niger N402|type=mRNA|length=1620bp|location=Sequence derived from alignment at OGUI01000013.1:1503950..1505569+ (Aspergillus niger N402)
ATGCACCACGGGCGAGTACGTCGCAAGAACGGCAGTCTCAGAGCCTCCAA
AGCTGGCCAGCGTCGCAACATGTCCCATTTGATACCCGATAATGCCCCTC
CACCTCAATCCAAAACCGTCACCGTTAGCGACGATAGTCCTGATACCTCC
GACGCCGCCTCGAACACTTCAGCGACCACCGTTATCACCAATACCTCCAG
CGTCCCTGCCACCTCTCCCACTAACGGGGTTGATCCCGTGAAGAAAGCTA
TGGCCCGCAAGGCTTCGTCGCCGATGGCGCCCCCTTTCATGGTGTCCGCG
CCGGGCAAGGTCATCGTCTTCGGTGAACATGCCGTCGTGCACGGCAAGGC
TGCCATGGCCGCCGCAATCTCCCTCCGCTCCTACTTCCTCGTAACCACTC
TGTCGAAATCACAGCGCACCATTACCTTGAACCTCCGGGACATGGATTTC
AACCACACCTGGAACATTGACGATCTGCCCTGGGATTTCTTCAAACAACC
CTCCAAGAAGAAGTACTATTACGACCTAGTAACTAGCCTCGACGAAGAAT
TGTACGACTCTCTGAAACCATGTGTTGAAGATATATCGCCCAAGGCGCCC
GAGGAGATACGGAAGAAACACAAAGGGTCGGCGCTGGCGTTCCTGTACCT
ATTTTGCTCCTTGGGCTCACCCCAGCACCCAGGAGCTATATATACTTTGC
GCTCGACCATCCCCATGGGTGCAGGTCTTGGAAGCAGCGCCAGTGTCTGC
ACTTGTTTCAGTGCTGCATTGTTACTTCAGATCCGTACTCTAGCAGGCCC
ACATGATGATCAGCCCCCGGATGAAGCGGAGTTACAGATCGAGCGTATCA
ACCGGTGGGCTTTTGTCGGAGAATTATGTATACACGGAAACCCAAGTGGT
GTGGACAACACGGTCTCTACTGGCGGCAAGGCCGTAATTTTCAGGAGAGA
GGACTACTCGAAGCCCCCGAAAGTTATACCGCTACCTAATTTCCCTGAAT
TACCGCTCTTGCTTGTTGACACACGACAGAGCCGCTCGACGGCGGTCGAA
GTTGCCAAAGTTGGGAAGCTCAAGAAGGAACACCCACTCGTCACCGAATC
GATCCTTGATGCCATTGATAAGGTGACTGTGTCCGCTCAGAGTGCGATCC
AGGGGGTGGAGGGTGATAGTATCGATAAGGAGACTCTCGAACATATCGGA
ACGCTGGTTCGTGTCAACCACGGTTTCCTAGTTTCCCTGGGGGTATCTCA
TCCGCGACTGGAGCGAATCCGGGAACTGGTCGACTTTGCCAATATTGGTT
GGACAAAGTTGACTGGTGCGGGCGGCGGTGGTTGTGCGATCACACTCCTG
CGCCCAGATGCCAGTGTGGACGCGCTCCGTGAGCTGGAGCGCAAACTCGC
TGCAGAGAATTTCTCCAAGTATGAGACAACCTTGGGTGGAGACGGTATTG
GAGTCCTCTGGCCAGCGGTGCTGCACAACGGCACTGATGAAGAGGGCGGC
GAAGAGATCGACCAGCAGAAGTTTGAAAATGCCGACGGACCCGAAGGCAT
CGAGCGCCTTGTTGGCGTCGGCGTTCAAGAACGTCGGGAAGGCTGGAAAT
TCTGGAAACGAGCTGTCTGA
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Coding sequence (CDS) from alignment at OGUI01000013.1:1503950..1505569+

>ATCC64974_78210-T1 ID=ATCC64974_78210-T1|Name=ATCC64974_78210-T1|organism=Aspergillus niger N402|type=CDS|length=1620bp|location=Sequence derived from alignment at OGUI01000013.1:1503950..1505569+ (Aspergillus niger N402)
ATGCACCACGGGCGAGTACGTCGCAAGAACGGCAGTCTCAGAGCCTCCAA
AGCTGGCCAGCGTCGCAACATGTCCCATTTGATACCCGATAATGCCCCTC
CACCTCAATCCAAAACCGTCACCGTTAGCGACGATAGTCCTGATACCTCC
GACGCCGCCTCGAACACTTCAGCGACCACCGTTATCACCAATACCTCCAG
CGTCCCTGCCACCTCTCCCACTAACGGGGTTGATCCCGTGAAGAAAGCTA
TGGCCCGCAAGGCTTCGTCGCCGATGGCGCCCCCTTTCATGGTGTCCGCG
CCGGGCAAGGTCATCGTCTTCGGTGAACATGCCGTCGTGCACGGCAAGGC
TGCCATGGCCGCCGCAATCTCCCTCCGCTCCTACTTCCTCGTAACCACTC
TGTCGAAATCACAGCGCACCATTACCTTGAACCTCCGGGACATGGATTTC
AACCACACCTGGAACATTGACGATCTGCCCTGGGATTTCTTCAAACAACC
CTCCAAGAAGAAGTACTATTACGACCTAGTAACTAGCCTCGACGAAGAAT
TGTACGACTCTCTGAAACCATGTGTTGAAGATATATCGCCCAAGGCGCCC
GAGGAGATACGGAAGAAACACAAAGGGTCGGCGCTGGCGTTCCTGTACCT
ATTTTGCTCCTTGGGCTCACCCCAGCACCCAGGAGCTATATATACTTTGC
GCTCGACCATCCCCATGGGTGCAGGTCTTGGAAGCAGCGCCAGTGTCTGC
ACTTGTTTCAGTGCTGCATTGTTACTTCAGATCCGTACTCTAGCAGGCCC
ACATGATGATCAGCCCCCGGATGAAGCGGAGTTACAGATCGAGCGTATCA
ACCGGTGGGCTTTTGTCGGAGAATTATGTATACACGGAAACCCAAGTGGT
GTGGACAACACGGTCTCTACTGGCGGCAAGGCCGTAATTTTCAGGAGAGA
GGACTACTCGAAGCCCCCGAAAGTTATACCGCTACCTAATTTCCCTGAAT
TACCGCTCTTGCTTGTTGACACACGACAGAGCCGCTCGACGGCGGTCGAA
GTTGCCAAAGTTGGGAAGCTCAAGAAGGAACACCCACTCGTCACCGAATC
GATCCTTGATGCCATTGATAAGGTGACTGTGTCCGCTCAGAGTGCGATCC
AGGGGGTGGAGGGTGATAGTATCGATAAGGAGACTCTCGAACATATCGGA
ACGCTGGTTCGTGTCAACCACGGTTTCCTAGTTTCCCTGGGGGTATCTCA
TCCGCGACTGGAGCGAATCCGGGAACTGGTCGACTTTGCCAATATTGGTT
GGACAAAGTTGACTGGTGCGGGCGGCGGTGGTTGTGCGATCACACTCCTG
CGCCCAGATGCCAGTGTGGACGCGCTCCGTGAGCTGGAGCGCAAACTCGC
TGCAGAGAATTTCTCCAAGTATGAGACAACCTTGGGTGGAGACGGTATTG
GAGTCCTCTGGCCAGCGGTGCTGCACAACGGCACTGATGAAGAGGGCGGC
GAAGAGATCGACCAGCAGAAGTTTGAAAATGCCGACGGACCCGAAGGCAT
CGAGCGCCTTGTTGGCGTCGGCGTTCAAGAACGTCGGGAAGGCTGGAAAT
TCTGGAAACGAGCTGTCTGA
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Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Cellular Component
TermDefinition
GO:0005737cytoplasm
Vocabulary: Molecular Function
TermDefinition
GO:0004496mevalonate kinase activity
GO:0005524ATP binding
Vocabulary: Biological Process
TermDefinition
GO:0008299isoprenoid biosynthetic process
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
ATCC64974_78210ATCC64974_78210Aspergillus niger N402gene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ATCC64974_78210-T1.exon1ATCC64974_78210-T1.exon1Aspergillus niger N402exon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ATCC64974_78210-T1.cdsATCC64974_78210-T1.cdsAspergillus niger N402CDS


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
ATCC64974_78210-T1ATCC64974_78210-T1-proteinAspergillus niger N402polypeptide


Properties
Property NameValue
DBxrefInterPro:IPR020568
DBxrefInterPro:IPR006203
DBxrefInterPro:IPR014721
DBxrefInterPro:IPR006204
DBxrefInterPro:IPR013750
DBxrefInterPro:IPR036554
DBxrefInterPro:IPR006205
DBxrefPFAM:PF00288
DBxrefPFAM:PF08544
Producthypothetical protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger N402 whole genome analysis2021-11-01
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
OGUI01000013.1supercontigOGUI01000013.1:1503950..1505569 +
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