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ATCC64974_78560-T1, ATCC64974_78560-T1 (mRNA) Aspergillus niger N402

Overview
NameATCC64974_78560-T1
Unique NameATCC64974_78560-T1
TypemRNA
OrganismAspergillus niger N402
Sequences
The following sequences are available for this feature:

mRNA from alignment at OGUI01000013.1:1584112..1585930+

Legend: exonpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>ATCC64974_78560-T1 ID=ATCC64974_78560-T1|Name=ATCC64974_78560-T1|organism=Aspergillus niger N402|type=mRNA|length=1819bp|location=Sequence derived from alignment at OGUI01000013.1:1584112..1585930+ (Aspergillus niger N402)
ATGCCGGGCGAAGCAACTGAGAACGGCGTTCCGTACCCCGTTTCAACCAA
GTTGGACAACCTGACCCTGAACGAGCGTTCGGCTGCTCCGTCTCCCACTT
CGGACAAGGTGGATGGTCAAGAGCGATCAACAGTCGATTATGGCATTCCT
GACGCCTTCCTGCTTCCCAATGGAACGCCTGACGTGAGTCTATACTGTAT
CTTTACGCCCTCTATCCAATTACTGATGTGATGCTTCTTTATAGTATCTC
CGGTTGATCCTGACGTCCCGTGTCTACGACATTATCGAGGAAACCCCGCT
TCACCATGCGGTCAACATCAGCAATCGCCTGGAGTGCCGTGTGCTCCTGA
AGAGAGAGGATCTTCTCCCCGTGTTCAGTTTCAAGCTCCGTGGAGCCTAC
AACAAAATGGCGCACTTGACCCCCGAGCAACGGTGGAAGGGAGTCATTGC
GTGCTCAGCAGGTGGGTGGCGTCGGTGTGAAGTAGTCACGGTAACACTAG
TCGACTGACATAAACAAAAAGGAAACCATGCGCAGGGCGTCGCTTACTCG
GCTCGGAAACTGAAGATCCCCGCCACTATCGTTATGCCATCGGGCACCCC
CGCTATCAAGCATCTGAATGTCGCCCGCCTGGGTGGTAGCGTGGTCCTCC
ACGGGGACGACTTCGACGCAGCTAAGCAAGAAGCATACCGGTTGCAGGAG
CAACACGGACTTACCATGATCCCTCCCTTCGATGACCCCTACGTGATCGC
TGGCCAAGGAACCATTGGCATGGAGATATTGCGCCAGGCCAATTTGCAGA
AGCTAGAAGCTGTCTTCTGTGCCGTCGGTGGAGGAGGTCTGATTGCTGGC
ATTGGCGTCTACCTTAAGCGCATCGCACCACACGTGAAGATCATTGGCGT
TGAGGCCCGCGATGCCAATGCCATGGCACAGTCCCTCGAATCGGGTTCTC
GAGTGTTTCTGAAGGATGTGGGCCTGTTCGCAGACGGTGCTGCTGTCAAG
TCTGTTGGAGAGGAGAACTATCGACTTGCACGTGAAGTCATCGATGAGGT
CGTTCAGGTCACAACCGATGAGACATGCGCCGCCATCAAGGATGCGTTTG
AGGACACACGGTCTATCATTGAACCAGCAGGTGCCCTGGCTCTGGCCGGT
CTCAAGAAGTACGCCGTAATGAACCCCAGCCCCGACACGAGCAGGGAGTT
GTGCGCTATCGCCTCCGGAGCTAACATGGACTTCGACCGCCTGCGCTTCG
TTGCTGAGCGTGCGGCTCTGGGAGAGCGGAAGGAGGCGCTCCTGAGCGTC
AGGATCCCCGAGAAGCCAGGCGCTTTCGCAAAGCTTGTCGAGGTTGTTCT
TCCTCATGCAGTCACGGCGTTCAGCTACCGTTACGCCCGTGAATCGTCTG
CCGATGTTCTGATGGGCATCTCTTTGTCCGCTGCTACTGGTCGGGACGAT
TTGGCCAAGATTATCAGCCAATTGGTACGAGGTGGCATGGATACGAAGGA
TCTTAGTGATGACGAGCTGGCGAAGAGACACTTGCGCTTCCTGGTTGGTG
GTCGCAGTGAGGTCGCGGATGAACGGTTGTTCATGTTCGAGTTCCCCGAA
CGTCCGGGTGCTCTTGCTAAGTTCTTGACGACCCTTCGTCCCAACCAGAA
TATCTCCCTGTTCCACTACCGTAACTATGGTGGTGATGTTGGCAAGGTGC
TTGCGGGTATCCAGTGCCCTGAGAACGAGAAGGCCGAGCTGGAGGCTTTC
CTCAGCGATCTGGCTTATCCCTTCACTGAACATACCGATTCCCCGACCTA
CAAGACCTTCCTGAGGTAG
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Coding sequence (CDS) from alignment at OGUI01000013.1:1584112..1585930+

>ATCC64974_78560-T1 ID=ATCC64974_78560-T1|Name=ATCC64974_78560-T1|organism=Aspergillus niger N402|type=CDS|length=5094bp|location=Sequence derived from alignment at OGUI01000013.1:1584112..1585930+ (Aspergillus niger N402)
ATGCCGGGCGAAGCAACTGAGAACGGCGTTCCGTACCCCGTTTCAACCAA
GTTGGACAACCTGACCCTGAACGAGCGTTCGGCTGCTCCGTCTCCCACTT
CGGACAAGGTGGATGGTCAAGAGCGATCAACAGTCGATTATGGCATTCCT
GACGCCTTCCTGCTTCCCAATGGAACGCCTGACTATCTCCGGTTGATCCT
GACGTCCCGTGTCTACGACATTATCGAGGAAACCCCGCTTCACCATGCGG
TCAACATCAGCAATCGCCTGGAGTGCCGTGTGCTCCTGAAGAGAGAGGAT
CTTCTCCCCGTGTTCAGTTTCAAGCTCCGTGGAGCCTACAACAAAATGGC
GCACTTGACCCCCGAGCAACGGTGGAAGGGAGTCATTGCGTGCTCAGCAG
GAAACCATGCGCAGGGCGTCGCTTACTCGGCTCGGAAACTGAAGATCCCC
GCCACTATCGTTATGCCATCGGGCACCCCCGCTATCAAGCATCTGAATGT
CGCCCGCCTGGGTGGTAGCGTGGTCCTCCACGGGGACGACTTCGACGCAG
CTAAGCAAGAAGCATACCGGTTGCAGGAGCAACACGGACTTACCATGATC
CCTCCCTTCGATGACCCCTACGTGATCGCTGGCCAAGGAACCATTGGCAT
GGAGATATTGCGCCAGGCCAATTTGCAGAAGCTAGAAGCTGTCTTCTGTG
CCGTCGGTGGAGGAGGTCTGATTGCTGGCATTGGCGTCTACCTTAAGCGC
ATCGCACCACACGTGAAGATCATTGGCGTTGAGGCCCGCGATGCCAATGC
CATGGCACAGTCCCTCGAATCGGGTTCTCGAGTGTTTCTGAAGGATGTGG
GCCTGTTCGCAGACGGTGCTGCTGTCAAGTCTGTTGGAGAGGAGAACTAT
CGACTTGCACGTGAAGTCATCGATGAGGTCGTTCAGGTCACAACCGATGA
GACATGCGCCGCCATCAAGGATGCGTTTGAGGACACACGGTCTATCATTG
AACCAGCAGGTGCCCTGGCTCTGGCCGGTCTCAAGAAGTACGCCGTAATG
AACCCCAGCCCCGACACGAGCAGGGAGTTGTGCGCTATCGCCTCCGGAGC
TAACATGGACTTCGACCGCCTGCGCTTCGTTGCTGAGCGTGCGGCTCTGG
GAGAGCGGAAGGAGGCGCTCCTGAGCGTCAGGATCCCCGAGAAGCCAGGC
GCTTTCGCAAAGCTTGTCGAGGTTGTTCTTCCTCATGCAGTCACGGCGTT
CAGCTACCGTTACGCCCGTGAATCGTCTGCCGATGTTCTGATGGGCATCT
CTTTGTCCGCTGCTACTGGTCGGGACGATTTGGCCAAGATTATCAGCCAA
TTGGTACGAGGTGGCATGGATACGAAGGATCTTAGTGATGACGAGCTGGC
GAAGAGACACTTGCGCTTCCTGGTTGGTGGTCGCAGTGAGGTCGCGGATG
AACGGTTGTTCATGTTCGAGTTCCCCGAACGTCCGGGTGCTCTTGCTAAG
TTCTTGACGACCCTTCGTCCCAACCAGAATATCTCCCTGTTCCACTACCG
TAACTATGGTGGTGATGTTGGCAAGGTGCTTGCGGGTATCCAGTGCCCTG
AGAACGAGAAGGCCGAGCTGGAGGCTTTCCTCAGCGATCTGGCTTATCCC
TTCACTGAACATACCGATTCCCCGACCTACAAGACCTTCCTGAGGTAGAT
GCCGGGCGAAGCAACTGAGAACGGCGTTCCGTACCCCGTTTCAACCAAGT
TGGACAACCTGACCCTGAACGAGCGTTCGGCTGCTCCGTCTCCCACTTCG
GACAAGGTGGATGGTCAAGAGCGATCAACAGTCGATTATGGCATTCCTGA
CGCCTTCCTGCTTCCCAATGGAACGCCTGACTATCTCCGGTTGATCCTGA
CGTCCCGTGTCTACGACATTATCGAGGAAACCCCGCTTCACCATGCGGTC
AACATCAGCAATCGCCTGGAGTGCCGTGTGCTCCTGAAGAGAGAGGATCT
TCTCCCCGTGTTCAGTTTCAAGCTCCGTGGAGCCTACAACAAAATGGCGC
ACTTGACCCCCGAGCAACGGTGGAAGGGAGTCATTGCGTGCTCAGCAGGA
AACCATGCGCAGGGCGTCGCTTACTCGGCTCGGAAACTGAAGATCCCCGC
CACTATCGTTATGCCATCGGGCACCCCCGCTATCAAGCATCTGAATGTCG
CCCGCCTGGGTGGTAGCGTGGTCCTCCACGGGGACGACTTCGACGCAGCT
AAGCAAGAAGCATACCGGTTGCAGGAGCAACACGGACTTACCATGATCCC
TCCCTTCGATGACCCCTACGTGATCGCTGGCCAAGGAACCATTGGCATGG
AGATATTGCGCCAGGCCAATTTGCAGAAGCTAGAAGCTGTCTTCTGTGCC
GTCGGTGGAGGAGGTCTGATTGCTGGCATTGGCGTCTACCTTAAGCGCAT
CGCACCACACGTGAAGATCATTGGCGTTGAGGCCCGCGATGCCAATGCCA
TGGCACAGTCCCTCGAATCGGGTTCTCGAGTGTTTCTGAAGGATGTGGGC
CTGTTCGCAGACGGTGCTGCTGTCAAGTCTGTTGGAGAGGAGAACTATCG
ACTTGCACGTGAAGTCATCGATGAGGTCGTTCAGGTCACAACCGATGAGA
CATGCGCCGCCATCAAGGATGCGTTTGAGGACACACGGTCTATCATTGAA
CCAGCAGGTGCCCTGGCTCTGGCCGGTCTCAAGAAGTACGCCGTAATGAA
CCCCAGCCCCGACACGAGCAGGGAGTTGTGCGCTATCGCCTCCGGAGCTA
ACATGGACTTCGACCGCCTGCGCTTCGTTGCTGAGCGTGCGGCTCTGGGA
GAGCGGAAGGAGGCGCTCCTGAGCGTCAGGATCCCCGAGAAGCCAGGCGC
TTTCGCAAAGCTTGTCGAGGTTGTTCTTCCTCATGCAGTCACGGCGTTCA
GCTACCGTTACGCCCGTGAATCGTCTGCCGATGTTCTGATGGGCATCTCT
TTGTCCGCTGCTACTGGTCGGGACGATTTGGCCAAGATTATCAGCCAATT
GGTACGAGGTGGCATGGATACGAAGGATCTTAGTGATGACGAGCTGGCGA
AGAGACACTTGCGCTTCCTGGTTGGTGGTCGCAGTGAGGTCGCGGATGAA
CGGTTGTTCATGTTCGAGTTCCCCGAACGTCCGGGTGCTCTTGCTAAGTT
CTTGACGACCCTTCGTCCCAACCAGAATATCTCCCTGTTCCACTACCGTA
ACTATGGTGGTGATGTTGGCAAGGTGCTTGCGGGTATCCAGTGCCCTGAG
AACGAGAAGGCCGAGCTGGAGGCTTTCCTCAGCGATCTGGCTTATCCCTT
CACTGAACATACCGATTCCCCGACCTACAAGACCTTCCTGAGGTAGATGC
CGGGCGAAGCAACTGAGAACGGCGTTCCGTACCCCGTTTCAACCAAGTTG
GACAACCTGACCCTGAACGAGCGTTCGGCTGCTCCGTCTCCCACTTCGGA
CAAGGTGGATGGTCAAGAGCGATCAACAGTCGATTATGGCATTCCTGACG
CCTTCCTGCTTCCCAATGGAACGCCTGACTATCTCCGGTTGATCCTGACG
TCCCGTGTCTACGACATTATCGAGGAAACCCCGCTTCACCATGCGGTCAA
CATCAGCAATCGCCTGGAGTGCCGTGTGCTCCTGAAGAGAGAGGATCTTC
TCCCCGTGTTCAGTTTCAAGCTCCGTGGAGCCTACAACAAAATGGCGCAC
TTGACCCCCGAGCAACGGTGGAAGGGAGTCATTGCGTGCTCAGCAGGAAA
CCATGCGCAGGGCGTCGCTTACTCGGCTCGGAAACTGAAGATCCCCGCCA
CTATCGTTATGCCATCGGGCACCCCCGCTATCAAGCATCTGAATGTCGCC
CGCCTGGGTGGTAGCGTGGTCCTCCACGGGGACGACTTCGACGCAGCTAA
GCAAGAAGCATACCGGTTGCAGGAGCAACACGGACTTACCATGATCCCTC
CCTTCGATGACCCCTACGTGATCGCTGGCCAAGGAACCATTGGCATGGAG
ATATTGCGCCAGGCCAATTTGCAGAAGCTAGAAGCTGTCTTCTGTGCCGT
CGGTGGAGGAGGTCTGATTGCTGGCATTGGCGTCTACCTTAAGCGCATCG
CACCACACGTGAAGATCATTGGCGTTGAGGCCCGCGATGCCAATGCCATG
GCACAGTCCCTCGAATCGGGTTCTCGAGTGTTTCTGAAGGATGTGGGCCT
GTTCGCAGACGGTGCTGCTGTCAAGTCTGTTGGAGAGGAGAACTATCGAC
TTGCACGTGAAGTCATCGATGAGGTCGTTCAGGTCACAACCGATGAGACA
TGCGCCGCCATCAAGGATGCGTTTGAGGACACACGGTCTATCATTGAACC
AGCAGGTGCCCTGGCTCTGGCCGGTCTCAAGAAGTACGCCGTAATGAACC
CCAGCCCCGACACGAGCAGGGAGTTGTGCGCTATCGCCTCCGGAGCTAAC
ATGGACTTCGACCGCCTGCGCTTCGTTGCTGAGCGTGCGGCTCTGGGAGA
GCGGAAGGAGGCGCTCCTGAGCGTCAGGATCCCCGAGAAGCCAGGCGCTT
TCGCAAAGCTTGTCGAGGTTGTTCTTCCTCATGCAGTCACGGCGTTCAGC
TACCGTTACGCCCGTGAATCGTCTGCCGATGTTCTGATGGGCATCTCTTT
GTCCGCTGCTACTGGTCGGGACGATTTGGCCAAGATTATCAGCCAATTGG
TACGAGGTGGCATGGATACGAAGGATCTTAGTGATGACGAGCTGGCGAAG
AGACACTTGCGCTTCCTGGTTGGTGGTCGCAGTGAGGTCGCGGATGAACG
GTTGTTCATGTTCGAGTTCCCCGAACGTCCGGGTGCTCTTGCTAAGTTCT
TGACGACCCTTCGTCCCAACCAGAATATCTCCCTGTTCCACTACCGTAAC
TATGGTGGTGATGTTGGCAAGGTGCTTGCGGGTATCCAGTGCCCTGAGAA
CGAGAAGGCCGAGCTGGAGGCTTTCCTCAGCGATCTGGCTTATCCCTTCA
CTGAACATACCGATTCCCCGACCTACAAGACCTTCCTGAGGTAG
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Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Molecular Function
TermDefinition
GO:0030170pyridoxal phosphate binding
GO:0004794L-threonine ammonia-lyase activity
Vocabulary: Biological Process
TermDefinition
GO:0006520cellular amino acid metabolic process
GO:0009097isoleucine biosynthetic process
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
ILV1_2ATCC64974_78560Aspergillus niger N402gene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ATCC64974_78560-T1.exon1ATCC64974_78560-T1.exon1Aspergillus niger N402exon
ATCC64974_78560-T1.exon2ATCC64974_78560-T1.exon2Aspergillus niger N402exon
ATCC64974_78560-T1.exon3ATCC64974_78560-T1.exon3Aspergillus niger N402exon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ATCC64974_78560-T1.cdsATCC64974_78560-T1.cdsAspergillus niger N402CDS


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
ATCC64974_78560-T1ATCC64974_78560-T1-proteinAspergillus niger N402polypeptide


Properties
Property NameValue
NoteBUSCO:EOG09261O4Y
DBxrefInterPro:IPR036052
DBxrefInterPro:IPR000634
DBxrefInterPro:IPR038110
DBxrefInterPro:IPR001721
DBxrefInterPro:IPR001926
DBxrefInterPro:IPR005787
DBxrefPFAM:PF00585
DBxrefPFAM:PF00291
Productthreonine deaminase
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger N402 whole genome analysis2021-11-01
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
OGUI01000013.1supercontigOGUI01000013.1:1584112..1585930 +
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